RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 SP5Q6BEB4 398 aaPredicted RBP10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 DEFB136Q30KP8 78 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 SMPXQ9UHP9 88 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 AZU1P20160 251 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 NDUFA4L2Q9NRX3 87 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 TSC2P49815 1807 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 FAM223BA6NKX1 122 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 PRB2P02812 416 aaPredicted RBP10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 SUMO4Q6EEV6 95 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 DTX2Q86UW9 622 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 FAM223AQ8IWN6 122 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 ZNRF2Q8NHG8 242 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 LINC01356Q8N9X3 169 aa10.87□□□□□ -0.67
TGFBR3-201ENST00000212355 ARHGAP21Q5T5U3 1957 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 MRAPQ8TCY5 172 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 TRBV6-6A0A0A6YYG2 114 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 K7EN84 100 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 WT1-ASQ06250 92 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 DKK2Q9UBU2 259 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 EP300Q09472 2414 aaPredicted RBP10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 LY6G6EA0A0G2JKS1 128 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 U3KQA8 63 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 V9GYV3 84 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 TRAV25A0A0B4J276 109 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 GNRH2O43555 120 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 PLA2G5P39877 138 aa10.86□□□□□ -0.67
TGFBR3-201ENST00000212355 RITA1Q96K30 269 aa10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 TSSC4Q9Y5U2 329 aaPredicted RBP10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 LINC01549A6NIU2 74 aa10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 C2orf66Q6UXQ4 117 aa10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 IGHV4-4A0A075B6R2 117 aa10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 CDK2AP2O75956 126 aa10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 NPYP01303 97 aa10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 MRPL27Q9P0M9 148 aaKnown RBP10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 K7EM74 188 aa10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 IGLL1P15814 213 aa10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 USF3Q68DE3 2245 aa10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 AMTNQ6UX39 209 aa10.85□□□□□ -0.67
TGFBR3-201ENST00000212355 MYMXA0A1B0GTQ4 84 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 GATA1P15976 413 aaPredicted RBP10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 SS18Q15532 418 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 RSPO1Q2MKA7 263 aaPredicted RBP10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 A0A0J9YY99 117 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 TINCRA0A1B0GVN0 87 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 SIGLEC8Q9NYZ4 499 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 PKDREJQ9NTG1 2253 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 HLA-DRB4P13762 266 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 HLA-DRB4X5D2U9 266 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 CNOT1A5YKK6 2376 aaKnown RBP10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 TRBV19A0A075B6N1 114 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 NDUFS8O00217 210 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 C1orf147Q96MC9 270 aaPredicted RBP10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 NLRC5Q86WI3 1866 aa10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 PFN1P07737 140 aaKnown RBP10.84□□□□□ -0.67
TGFBR3-201ENST00000212355 MSMBP08118 114 aa10.83□□□□□ -0.68
TGFBR3-201ENST00000212355 FOXE3Q13461 319 aa10.83□□□□□ -0.68
TGFBR3-201ENST00000212355 Q6ZS92 163 aa10.83□□□□□ -0.68
TGFBR3-201ENST00000212355 ZNF833PQ6ZTB9 187 aa10.83□□□□□ -0.68
TGFBR3-201ENST00000212355 LY6G5BQ8NDX9 201 aa10.83□□□□□ -0.68
TGFBR3-201ENST00000212355 FAM104BQ5XKR9 115 aa10.83□□□□□ -0.68
TGFBR3-201ENST00000212355 USMG5Q96IX5 58 aa10.83□□□□□ -0.68
TGFBR3-201ENST00000212355 FOXL2NBQ6ZUU3 175 aa10.83□□□□□ -0.68
TGFBR3-201ENST00000212355 TRPT1Q86TN4 253 aaKnown RBP10.83□□□□□ -0.68
TGFBR3-201ENST00000212355 MRPL35Q9NZE8 188 aaKnown RBP10.83□□□□□ -0.68
TGFBR3-201ENST00000212355 IGHG3P01860 377 aa10.82□□□□□ -0.68
TGFBR3-201ENST00000212355 TCTEX1D4Q5JR98 221 aa10.82□□□□□ -0.68
TGFBR3-201ENST00000212355 WNK2Q9Y3S1 2297 aa10.82□□□□□ -0.68
TGFBR3-201ENST00000212355 PLXNA4Q9HCM2 1894 aa10.82□□□□□ -0.68
TGFBR3-201ENST00000212355 CACNA1BQ00975 2339 aa10.82□□□□□ -0.68
TGFBR3-201ENST00000212355 IGLV3-9A0A075B6K5 115 aa10.82□□□□□ -0.68
TGFBR3-201ENST00000212355 LOXP28300 417 aaPredicted RBP10.82□□□□□ -0.68
TGFBR3-201ENST00000212355 LINC01619G3V211 115 aa10.82□□□□□ -0.68
TGFBR3-201ENST00000212355 H3BMG7 143 aa10.82□□□□□ -0.68
TGFBR3-201ENST00000212355 DEFB105AQ8NG35 78 aa10.82□□□□□ -0.68
TGFBR3-201ENST00000212355 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 IGKV2-29A2NJV5 120 aaPredicted RBP10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 ANAPC10Q9UM13 185 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 PRSS46E5RG02 174 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 C3orf56Q8N813 242 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 IGF2BP2-AS1Q96M15 143 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 KIF26AQ9ULI4 1882 aaPredicted RBP10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 SDHAF1A6NFY7 115 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 FGF6P10767 208 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 Q6ZQT7 251 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 CD5LO43866 347 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 NRGNQ92686 78 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 IGHV1-69DA0A0B4J2H0 117 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 IGHV1-69P01742 117 aa10.81□□□□□ -0.68
TGFBR3-201ENST00000212355 H3BMM0 161 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 APRG1Q8IVJ8 170 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 UBE2WQ96B02 151 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 ESM1Q9NQ30 184 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 LY96Q9Y6Y9 160 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 SMIM27A0A1W2PRY6 76 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 C15orf65H3BRN8 121 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 CFHR4Q92496 578 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 DENND4CQ5VZ89 1909 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 DAD1P61803 113 aa10.8□□□□□ -0.68
TGFBR3-201ENST00000212355 ETDBQ3ZM63 59 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms