RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 COLCA2A8K830 154 aa13.2□□□□□ -0.3
PHGDH-234ENST00000642041 MRPS12O15235 138 aaKnown RBP13.2□□□□□ -0.3
PHGDH-234ENST00000642041 GCGP01275 180 aa13.2□□□□□ -0.3
PHGDH-234ENST00000642041 TCRAP04437 139 aa13.2□□□□□ -0.3
PHGDH-234ENST00000642041 Q6ZSV7 163 aa13.2□□□□□ -0.3
PHGDH-234ENST00000642041 BAGE2Q86Y30 109 aa13.2□□□□□ -0.3
PHGDH-234ENST00000642041 CBLN2Q8IUK8 224 aa13.2□□□□□ -0.3
PHGDH-234ENST00000642041 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.2□□□□□ -0.3
PHGDH-234ENST00000642041 OCC1Q8TAD7 63 aa13.2□□□□□ -0.3
PHGDH-234ENST00000642041 ZNF586Q9NXT0 402 aa13.2□□□□□ -0.3
PHGDH-234ENST00000642041 UFC1Q9Y3C8 167 aa13.2□□□□□ -0.3
PHGDH-234ENST00000642041 TENM2Q9NT68 2774 aa13.2□□□□□ -0.3
PHGDH-234ENST00000642041 FAM231DQ6ZW35 169 aa13.19□□□□□ -0.3
PHGDH-234ENST00000642041 ZNF785A8K8V0 405 aa13.18□□□□□ -0.3
PHGDH-234ENST00000642041 IGHV3-23P01764 117 aa13.18□□□□□ -0.3
PHGDH-234ENST00000642041 RAB5BP61020 215 aa13.18□□□□□ -0.3
PHGDH-234ENST00000642041 CENPWQ5EE01 88 aa13.18□□□□□ -0.3
PHGDH-234ENST00000642041 TMEM75Q8N9X5 138 aa13.18□□□□□ -0.3
PHGDH-234ENST00000642041 NOL4LQ96MY1 436 aaPredicted RBP13.18□□□□□ -0.3
PHGDH-234ENST00000642041 ZNF702PQ9H963 129 aa13.18□□□□□ -0.3
PHGDH-234ENST00000642041 S4R3C0 116 aa13.18□□□□□ -0.3
PHGDH-234ENST00000642041 C1orf196B1AJZ1 125 aa13.17□□□□□ -0.3
PHGDH-234ENST00000642041 RAB5AP20339 215 aa13.17□□□□□ -0.3
PHGDH-234ENST00000642041 SAPCD1Q5SSQ6 148 aa13.17□□□□□ -0.3
PHGDH-234ENST00000642041 MYOZ3Q8TDC0 251 aa13.17□□□□□ -0.3
PHGDH-234ENST00000642041 MLXQ9UH92 298 aa13.17□□□□□ -0.3
PHGDH-234ENST00000642041 LINC00527Q9UJ94 153 aa13.17□□□□□ -0.3
PHGDH-234ENST00000642041 RBAKDNA6NC62 111 aa13.16□□□□□ -0.3
PHGDH-234ENST00000642041 LGALS9O00182 355 aa13.16□□□□□ -0.3
PHGDH-234ENST00000642041 ERVFC1-1P60608 527 aa13.16□□□□□ -0.3
PHGDH-234ENST00000642041 FLI1Q01543 452 aaPredicted RBP13.16□□□□□ -0.3
PHGDH-234ENST00000642041 ELOBQ15370 118 aa13.16□□□□□ -0.3
PHGDH-234ENST00000642041 SIGLEC15Q6ZMC9 328 aa13.16□□□□□ -0.3
PHGDH-234ENST00000642041 FAM24BQ8N5W8 94 aa13.16□□□□□ -0.3
PHGDH-234ENST00000642041 PYGO2Q9BRQ0 406 aa13.16□□□□□ -0.3
PHGDH-234ENST00000642041 DAZ1Q9NQZ3 744 aaKnown RBP13.16□□□□□ -0.3
PHGDH-234ENST00000642041 LGALS1P09382 135 aaKnown RBP13.15□□□□□ -0.3
PHGDH-234ENST00000642041 CDX1P47902 265 aaPredicted RBP13.15□□□□□ -0.3
PHGDH-234ENST00000642041 LEMD1Q68G75 181 aa13.15□□□□□ -0.3
PHGDH-234ENST00000642041 C16orf54Q6UWD8 224 aa13.15□□□□□ -0.3
PHGDH-234ENST00000642041 IGF2BP2-AS1Q96M15 143 aa13.15□□□□□ -0.3
PHGDH-234ENST00000642041 PPP5D1E7EU14 171 aa13.14□□□□□ -0.31
PHGDH-234ENST00000642041 K7EIL1 84 aa13.14□□□□□ -0.31
PHGDH-234ENST00000642041 LTAP01374 205 aa13.14□□□□□ -0.31
PHGDH-234ENST00000642041 PFN1P07737 140 aaKnown RBP13.14□□□□□ -0.31
PHGDH-234ENST00000642041 RPEL1Q2QD12 228 aa13.14□□□□□ -0.31
PHGDH-234ENST00000642041 CT83Q5H943 113 aa13.14□□□□□ -0.31
PHGDH-234ENST00000642041 IBA57Q5T440 356 aaKnown RBP13.14□□□□□ -0.31
PHGDH-234ENST00000642041 TMEM183AQ8IXX5 376 aa13.14□□□□□ -0.31
PHGDH-234ENST00000642041 DAZAP1Q96EP5 407 aaKnown RBP13.14□□□□□ -0.31
PHGDH-234ENST00000642041 DERL1Q9BUN8 251 aa13.14□□□□□ -0.31
PHGDH-234ENST00000642041 SAV1Q9H4B6 383 aaPredicted RBP13.14□□□□□ -0.31
PHGDH-234ENST00000642041 ZNF492Q9P255 531 aa13.14□□□□□ -0.31
PHGDH-234ENST00000642041 DNAH1Q9P2D7 4330 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 TRBV20OR9-2A0A075B6H5 130 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 FAM231BA6NCW3 169 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 DIRC3C9JPN6 131 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 TYMSP04818 313 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 FAM3BP58499 235 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-234ENST00000642041 OR4B1Q8NGF8 309 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 FAM210BQ96KR6 192 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 YPEL4Q96NS1 127 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 NDFIP1Q9BT67 221 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 KLK15Q9H2R5 256 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 ZNF331Q9NQX6 463 aaPredicted RBP13.13□□□□□ -0.31
PHGDH-234ENST00000642041 IL36BQ9NZH7 164 aa13.13□□□□□ -0.31
PHGDH-234ENST00000642041 PSG3Q16557 428 aa13.12□□□□□ -0.31
PHGDH-234ENST00000642041 TMEM95Q3KNT9 176 aa13.12□□□□□ -0.31
PHGDH-234ENST00000642041 Q6ZS46 218 aa13.12□□□□□ -0.31
PHGDH-234ENST00000642041 SRD5A3Q9H8P0 318 aa13.12□□□□□ -0.31
PHGDH-234ENST00000642041 CT45A10P0DMU9 189 aa13.11□□□□□ -0.31
PHGDH-234ENST00000642041 RASL11AQ6T310 242 aa13.11□□□□□ -0.31
PHGDH-234ENST00000642041 COX8CQ7Z4L0 72 aa13.11□□□□□ -0.31
PHGDH-234ENST00000642041 KLHDC1Q8N7A1 406 aa13.11□□□□□ -0.31
PHGDH-234ENST00000642041 MLST8Q9BVC4 326 aa13.11□□□□□ -0.31
PHGDH-234ENST00000642041 SERTAD4Q9NUC0 356 aa13.11□□□□□ -0.31
PHGDH-234ENST00000642041 PPP1R14DQ9NXH3 145 aa13.11□□□□□ -0.31
PHGDH-234ENST00000642041 IGHV7-4-1A0A0J9YVY3 117 aa13.1□□□□□ -0.31
PHGDH-234ENST00000642041 XKRY2A2RUG3 117 aa13.1□□□□□ -0.31
PHGDH-234ENST00000642041 A8MWP6 167 aa13.1□□□□□ -0.31
PHGDH-234ENST00000642041 C3orf84H3BNL1 204 aa13.1□□□□□ -0.31
PHGDH-234ENST00000642041 MGST1P10620 155 aaKnown RBP13.1□□□□□ -0.31
PHGDH-234ENST00000642041 ID1P41134 155 aa13.1□□□□□ -0.31
PHGDH-234ENST00000642041 DEFB121Q5J5C9 76 aa13.1□□□□□ -0.31
PHGDH-234ENST00000642041 GLMPQ8WWB7 406 aa13.1□□□□□ -0.31
PHGDH-234ENST00000642041 GFRA4Q9GZZ7 299 aa13.1□□□□□ -0.31
PHGDH-234ENST00000642041 TMA7Q9Y2S6 64 aaKnown RBP13.1□□□□□ -0.31
PHGDH-234ENST00000642041 LENEPQ9Y5L5 61 aa13.1□□□□□ -0.31
PHGDH-234ENST00000642041 ZNF320A2RRD8 509 aa13.09□□□□□ -0.31
PHGDH-234ENST00000642041 A8MWL6 223 aa13.09□□□□□ -0.31
PHGDH-234ENST00000642041 GATCO43716 136 aaKnown RBP13.09□□□□□ -0.31
PHGDH-234ENST00000642041 RPS10P46783 165 aaKnown RBP13.09□□□□□ -0.31
PHGDH-234ENST00000642041 GOLT1AQ6ZVE7 132 aa13.09□□□□□ -0.31
PHGDH-234ENST00000642041 PEMTQ9UBM1 199 aa13.09□□□□□ -0.31
PHGDH-234ENST00000642041 SMPXQ9UHP9 88 aa13.09□□□□□ -0.31
PHGDH-234ENST00000642041 PSG8Q9UQ74 426 aa13.09□□□□□ -0.31
PHGDH-234ENST00000642041 TRBV7-9A0A0J9YWB2 115 aa13.08□□□□□ -0.32
PHGDH-234ENST00000642041 IGLV2-8P01709 118 aa13.08□□□□□ -0.32
PHGDH-234ENST00000642041 IGHV3-11P01762 117 aa13.08□□□□□ -0.32
PHGDH-234ENST00000642041 LCN12Q6JVE5 192 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms