RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 IGHV1-46P01743 117 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 C3orf36Q3SXR2 165 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 ZNF474Q6S9Z5 364 aaPredicted RBP4.57□□□□□ -1.68
SCARB2-218ENST00000639715 PRADC1Q9BSG0 188 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 METRNQ9UJH8 293 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 UTRNP46939 3433 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 CDX4O14627 284 aaPredicted RBP4.57□□□□□ -1.68
SCARB2-218ENST00000639715 NCR2O95944 276 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 LTAP01374 205 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 TFF1P04155 84 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 ZNF415Q09FC8 603 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 WDR86Q86TI4 376 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 Q8TCH9 128 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 CDIP1Q9H305 208 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 CENPVL3A0A0U1RRI6 287 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 LOC107984640A0A0U1RRK4 108 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 IGHV4-39P01824 125 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 ORMDL3Q8N138 153 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 FMC1Q96HJ9 113 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 CHCHD5Q9BSY4 110 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 SLC25A2Q9BXI2 301 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 DKK2Q9UBU2 259 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 PKIGQ9Y2B9 76 aa4.57□□□□□ -1.68
SCARB2-218ENST00000639715 INTS1Q8N201 2190 aaKnown RBP4.56□□□□□ -1.68
SCARB2-218ENST00000639715 TRAV4A0A0B4J268 109 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 VWC2LB2RUY7 222 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 FAM19A5Q7Z5A7 132 aaPredicted RBP4.56□□□□□ -1.68
SCARB2-218ENST00000639715 NTN5Q8WTR8 489 aaPredicted RBP4.56□□□□□ -1.68
SCARB2-218ENST00000639715 IGHV3-21A0A0B4J1V1 117 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 H3BTX0 84 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 APELAP0DMC3 54 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 LEPP41159 167 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 BSPH1Q075Z2 132 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 TMEM167AQ8TBQ9 72 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 ACACAQ13085 2346 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 PCNX2A6NKB5 2137 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 M0R3E3 92 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 SLC25A20O43772 301 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 GATA4P43694 442 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 RPL11P62913 178 aaKnown RBP4.56□□□□□ -1.68
SCARB2-218ENST00000639715 VKORC1Q9BQB6 163 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 A0A1W2PPI3 338 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 CCL21O00585 134 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 IGLV1-44P01699 117 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 SLC25A48Q6ZT89 311 aaKnown RBP4.56□□□□□ -1.68
SCARB2-218ENST00000639715 ANKRD29Q8N6D5 301 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 NUP37Q8NFH4 326 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 FGF23Q9GZV9 251 aaPredicted RBP4.56□□□□□ -1.68
SCARB2-218ENST00000639715 NXT2Q9NPJ8 142 aaKnown RBP4.56□□□□□ -1.68
SCARB2-218ENST00000639715 RAXQ9Y2V3 346 aa4.56□□□□□ -1.68
SCARB2-218ENST00000639715 DOCK10Q96BY6 2186 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 CADP27708 2225 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 TRAV3A0A0B4J244 114 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 TRACP01848 142 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 COX6CP09669 75 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 CCL3L1P16619 93 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 S100A4P26447 101 aaKnown RBP4.55□□□□□ -1.68
SCARB2-218ENST00000639715 HERVK_113P63121 156 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 HOXA4Q00056 320 aaPredicted RBP4.55□□□□□ -1.68
SCARB2-218ENST00000639715 CRIP3Q6Q6R5 217 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 Q6ZR03 302 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 TMEM133Q9H2Q1 129 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 FREM1Q5H8C1 2179 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 NUP210LQ5VU65 1888 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 D6R8Y8 96 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 ORM1P02763 201 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 PLA2G2CQ5R387 149 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 GDF5OSQ5U4N7 250 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 ASCL2Q99929 193 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 TMEM14BQ9NUH8 114 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 DPM3Q9P2X0 92 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 LRP4O75096 1905 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 A0A087WX48 190 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 MYMXA0A1B0GTQ4 84 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 FAM236AA0A1B0GUQ0 79 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 FAM236BA0A1B0GV22 79 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 IGHV3-48P01763 117 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 PYYP10082 97 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 TAL2Q16559 108 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 GOLT1AQ6ZVE7 132 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 GATD1Q8NB37 220 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 OR11H6Q8NGC7 330 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 OTORQ9NRC9 128 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 HIGD1BQ9P298 99 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 ADAMTS9Q9P2N4 1935 aa4.55□□□□□ -1.68
SCARB2-218ENST00000639715 USF3Q68DE3 2245 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 TRAV40A0A0B4J280 105 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 C15orf65H3BRN8 121 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 DLX1P56177 255 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 Q6ZS92 163 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 DTX1Q86Y01 620 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 RNASE6Q93091 150 aaKnown RBP4.54□□□□□ -1.68
SCARB2-218ENST00000639715 GAFA1Q96PS6 74 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 RNF5Q99942 180 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 KLK15Q9H2R5 256 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 ABCA1O95477 2261 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 ZNF815PA8K554 130 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 FAM231DQ6ZW35 169 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 SPRY4Q9C004 299 aa4.54□□□□□ -1.68
SCARB2-218ENST00000639715 C21orf62Q9NYP8 219 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms