RNA–Protein interactions for RNA: ENST00000639470.1

COLCA2-207, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best)

Gene COLCA2, Length 1,207 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-207ENST00000639470 SLC50A1Q9BRV3 221 aa11.52□□□□□ -0.57
COLCA2-207ENST00000639470 A0A1B0GVY2 172 aa11.51□□□□□ -0.57
COLCA2-207ENST00000639470 NDUFB4O95168 129 aa11.51□□□□□ -0.57
COLCA2-207ENST00000639470 PVALBP20472 110 aaPredicted RBP11.51□□□□□ -0.57
COLCA2-207ENST00000639470 CDKN1BP46527 198 aa11.51□□□□□ -0.57
COLCA2-207ENST00000639470 RPL29P47914 159 aaKnown RBP11.51□□□□□ -0.57
COLCA2-207ENST00000639470 Q6ZRG5 221 aa11.51□□□□□ -0.57
COLCA2-207ENST00000639470 ENKURQ8TC29 256 aa11.51□□□□□ -0.57
COLCA2-207ENST00000639470 KRTAP17-1Q9BYP8 105 aa11.51□□□□□ -0.57
COLCA2-207ENST00000639470 NOP10Q9NPE3 64 aaKnown RBP11.51□□□□□ -0.57
COLCA2-207ENST00000639470 LYRM9A8MSI8 78 aa11.5□□□□□ -0.57
COLCA2-207ENST00000639470 F5H768 121 aa11.5□□□□□ -0.57
COLCA2-207ENST00000639470 TSPOP30536 169 aa11.5□□□□□ -0.57
COLCA2-207ENST00000639470 S100A11P31949 105 aa11.5□□□□□ -0.57
COLCA2-207ENST00000639470 TAS2R60P59551 318 aa11.5□□□□□ -0.57
COLCA2-207ENST00000639470 RAB31Q13636 194 aa11.5□□□□□ -0.57
COLCA2-207ENST00000639470 CLINT1Q14677 625 aa11.5□□□□□ -0.57
COLCA2-207ENST00000639470 STX12Q86Y82 276 aa11.5□□□□□ -0.57
COLCA2-207ENST00000639470 RNASE8Q8TDE3 154 aaKnown RBP11.5□□□□□ -0.57
COLCA2-207ENST00000639470 S100ZQ8WXG8 99 aa11.5□□□□□ -0.57
COLCA2-207ENST00000639470 EIF3GO75821 320 aaKnown RBP eCLIP11.49□□□□□ -0.57
COLCA2-207ENST00000639470 Q6ZQT7 251 aa11.49□□□□□ -0.57
COLCA2-207ENST00000639470 MIR17HGQ75NE6 70 aa11.49□□□□□ -0.57
COLCA2-207ENST00000639470 S100A7AQ86SG5 101 aa11.49□□□□□ -0.57
COLCA2-207ENST00000639470 EXOC3-AS1Q8N2X6 119 aa11.49□□□□□ -0.57
COLCA2-207ENST00000639470 OR1L4Q8NGR5 311 aa11.49□□□□□ -0.57
COLCA2-207ENST00000639470 OR10J6PQ8NGY7 276 aa11.49□□□□□ -0.57
COLCA2-207ENST00000639470 BLNKQ8WV28 456 aa11.49□□□□□ -0.57
COLCA2-207ENST00000639470 SLC25A2Q9BXI2 301 aa11.49□□□□□ -0.57
COLCA2-207ENST00000639470 NPCDR1Q9BY65 106 aa11.49□□□□□ -0.57
COLCA2-207ENST00000639470 TRBV19A0A075B6N1 114 aa11.48□□□□□ -0.57
COLCA2-207ENST00000639470 TRAV12-3A0A0B4J271 114 aa11.48□□□□□ -0.57
COLCA2-207ENST00000639470 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
COLCA2-207ENST00000639470 H2BFSP57053 126 aa11.48□□□□□ -0.57
COLCA2-207ENST00000639470 Q6ZR54 194 aa11.48□□□□□ -0.57
COLCA2-207ENST00000639470 OR5C1Q8NGR4 320 aa11.48□□□□□ -0.57
COLCA2-207ENST00000639470 FAM210BQ96KR6 192 aa11.48□□□□□ -0.57
COLCA2-207ENST00000639470 HECTD4Q9Y4D8 3996 aa11.47□□□□□ -0.57
COLCA2-207ENST00000639470 IGKV2-40A0A087WW87 121 aaPredicted RBP11.47□□□□□ -0.57
COLCA2-207ENST00000639470 INMT-MINDY4F8WBC2 141 aa11.47□□□□□ -0.57
COLCA2-207ENST00000639470 NUDT3O95989 172 aa11.47□□□□□ -0.57
COLCA2-207ENST00000639470 IGKV2D-40P01614 121 aaPredicted RBP11.47□□□□□ -0.57
COLCA2-207ENST00000639470 HBG1P69891 147 aa11.47□□□□□ -0.57
COLCA2-207ENST00000639470 HBG2P69892 147 aa11.47□□□□□ -0.57
COLCA2-207ENST00000639470 TMEM256Q8N2U0 113 aa11.47□□□□□ -0.57
COLCA2-207ENST00000639470 C16orf74Q96GX8 76 aa11.47□□□□□ -0.57
COLCA2-207ENST00000639470 FAM167A-AS1Q96KT0 104 aa11.47□□□□□ -0.57
COLCA2-207ENST00000639470 PRSS29PA6NIE9 313 aa11.46□□□□□ -0.57
COLCA2-207ENST00000639470 CD300CQ08708 224 aa11.46□□□□□ -0.57
COLCA2-207ENST00000639470 BTN1A1Q13410 526 aa11.46□□□□□ -0.57
COLCA2-207ENST00000639470 CHAC2Q8WUX2 184 aa11.46□□□□□ -0.57
COLCA2-207ENST00000639470 RNF141Q8WVD5 230 aa11.46□□□□□ -0.57
COLCA2-207ENST00000639470 PFDN5Q99471 154 aa11.46□□□□□ -0.57
COLCA2-207ENST00000639470 TIMM8BQ9Y5J9 83 aaPredicted RBP11.46□□□□□ -0.57
COLCA2-207ENST00000639470 GAGE12BA1L429 117 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 H7BYZ3 331 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 GAGE7O76087 117 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 ATP5G1P05496 136 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 OR10J4P0C629 311 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 GAGE12FP0CL80 117 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 GAGE12GP0CL81 117 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 GAGE12IP0CL82 117 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 ATP5G3P48201 142 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 ATP6V1FQ16864 119 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 LGALS9BQ3B8N2 356 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 PRR9Q5T870 116 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 TMEM263Q8WUH6 116 aaKnown RBP11.45□□□□□ -0.58
COLCA2-207ENST00000639470 AGPAT4-IT1Q9H0P7 198 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 RNF24Q9Y225 148 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 NACAE9PAV3 2078 aa11.45□□□□□ -0.58
COLCA2-207ENST00000639470 DNAH2Q9P225 4427 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 FAT2Q9NYQ8 4349 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 CBY3A6NI87 242 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 HIST1H1EP10412 219 aaKnown RBP11.44□□□□□ -0.58
COLCA2-207ENST00000639470 HOXA5P20719 270 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 ICAM4Q14773 271 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 GUK1Q16774 197 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 FAM122CQ6P4D5 195 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 PPP1R1CQ8WVI7 109 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 VGLL1Q99990 258 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 SMIM3Q9BZL3 60 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 NMES1Q9C002 83 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 TMEM14CQ9P0S9 112 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 HERC2O95714 4834 aa11.44□□□□□ -0.58
COLCA2-207ENST00000639470 A0A0J9YY99 117 aa11.43□□□□□ -0.58
COLCA2-207ENST00000639470 E5RGE8 158 aa11.43□□□□□ -0.58
COLCA2-207ENST00000639470 LEPP41159 167 aa11.43□□□□□ -0.58
COLCA2-207ENST00000639470 LINC00336Q6ZUF6 198 aa11.43□□□□□ -0.58
COLCA2-207ENST00000639470 LINC00612Q8N6U2 182 aa11.43□□□□□ -0.58
COLCA2-207ENST00000639470 ZNF503Q96F45 646 aa11.43□□□□□ -0.58
COLCA2-207ENST00000639470 PHYHIPLQ96FC7 376 aa11.43□□□□□ -0.58
COLCA2-207ENST00000639470 WDR61Q9GZS3 305 aaKnown RBP11.43□□□□□ -0.58
COLCA2-207ENST00000639470 TIMM9Q9Y5J7 89 aa11.43□□□□□ -0.58
COLCA2-207ENST00000639470 ZNF253O75346 499 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 OR5I1Q13606 314 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 RNF212Q495C1 297 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 Q6ZTI0 123 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 C15orf53Q8NAA6 179 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 ZNRF2Q8NHG8 242 aa11.42□□□□□ -0.58
COLCA2-207ENST00000639470 Q8TAT8 98 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms