RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 DNAJC4Q9NNZ3 241 aa11.75□□□□□ -0.53
SMN2-216ENST00000638794 LSM5Q9Y4Y9 91 aaKnown RBP11.75□□□□□ -0.53
SMN2-216ENST00000638794 APOBP04114 4563 aaKnown RBP11.75□□□□□ -0.53
SMN2-216ENST00000638794 TRAV26-1A0A087WT03 109 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 TRAV5A0A0B4J249 113 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 FAM25EA8MYX2 175 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 J3KRW8 73 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 PLA2G10O15496 165 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 CST7O76096 145 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 BCAP31P51572 246 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 OR5I1Q13606 314 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 CLINT1Q14677 625 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 ZNF846Q147U1 533 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 MIC13Q5XKP0 118 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 Q6ZRG5 221 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 NRARPQ7Z6K4 114 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 KRTAP4-5Q9BYR2 181 aa11.74□□□□□ -0.53
SMN2-216ENST00000638794 C16orf90A8MZG2 172 aa11.73□□□□□ -0.53
SMN2-216ENST00000638794 CT45A10P0DMU9 189 aa11.73□□□□□ -0.53
SMN2-216ENST00000638794 CAV2P51636 162 aa11.73□□□□□ -0.53
SMN2-216ENST00000638794 RAB31Q13636 194 aa11.73□□□□□ -0.53
SMN2-216ENST00000638794 CCDC28AQ8IWP9 274 aa11.73□□□□□ -0.53
SMN2-216ENST00000638794 GNPNAT1Q96EK6 184 aaPredicted RBP11.73□□□□□ -0.53
SMN2-216ENST00000638794 C11orf1Q9H5F2 150 aa11.73□□□□□ -0.53
SMN2-216ENST00000638794 TRAV6A0A075B6T7 132 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 TRAV12-3A0A0B4J271 114 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 FAM24AA6NFZ4 105 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 LYRM1O43325 122 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 M6PRP20645 277 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 HOXA5P20719 270 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 GUK1Q16774 197 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 OR1L4Q8NGR5 311 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 ODF3Q96PU9 254 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 SEC22CQ9BRL7 303 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 Q9H8V8 135 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 UQCC1Q9NVA1 299 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 WDR83OSQ9Y284 106 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 DNAH5Q8TE73 4624 aa11.72□□□□□ -0.53
SMN2-216ENST00000638794 A0A0J9YY99 117 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 GAGE12BA1L429 117 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 C5orf51A6NDU8 294 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 SNURFLB1AK76 121 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 NPIPB6E9PJ23 425 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 GAGE7O76087 117 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 RLN2P04090 185 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 GAGE12FP0CL80 117 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 GAGE12GP0CL81 117 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 GAGE12IP0CL82 117 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 LEPP41159 167 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 RXFP4Q8TDU9 374 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 ZNF431Q8TF32 576 aaPredicted RBP11.71□□□□□ -0.53
SMN2-216ENST00000638794 PFDN5Q99471 154 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 ZNF586Q9NXT0 402 aa11.71□□□□□ -0.53
SMN2-216ENST00000638794 UBE2L5PA0A1B0GUS4 154 aa11.7□□□□□ -0.54
SMN2-216ENST00000638794 TCRBP04435 133 aa11.7□□□□□ -0.54
SMN2-216ENST00000638794 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
SMN2-216ENST00000638794 ZNF503Q96F45 646 aa11.7□□□□□ -0.54
SMN2-216ENST00000638794 KRTAP1-5Q9BYS1 174 aa11.7□□□□□ -0.54
SMN2-216ENST00000638794 NUDT15Q9NV35 164 aa11.7□□□□□ -0.54
SMN2-216ENST00000638794 M0R3E3 92 aa11.69□□□□□ -0.54
SMN2-216ENST00000638794 ZNF253O75346 499 aa11.69□□□□□ -0.54
SMN2-216ENST00000638794 BAXQ07812 192 aa11.69□□□□□ -0.54
SMN2-216ENST00000638794 C2orf50Q96LR7 162 aa11.69□□□□□ -0.54
SMN2-216ENST00000638794 PYGO2Q9BRQ0 406 aa11.69□□□□□ -0.54
SMN2-216ENST00000638794 TMPRSS5Q9H3S3 457 aa11.69□□□□□ -0.54
SMN2-216ENST00000638794 LYRM2Q9NU23 88 aaPredicted RBP11.69□□□□□ -0.54
SMN2-216ENST00000638794 SLC39A9Q9NUM3 307 aa11.69□□□□□ -0.54
SMN2-216ENST00000638794 TRBV19A0A075B6N1 114 aa11.68□□□□□ -0.54
SMN2-216ENST00000638794 IGSF23A1L1A6 192 aa11.68□□□□□ -0.54
SMN2-216ENST00000638794 CDK2AP2O75956 126 aa11.68□□□□□ -0.54
SMN2-216ENST00000638794 PVALBP20472 110 aaPredicted RBP11.68□□□□□ -0.54
SMN2-216ENST00000638794 RPL29P47914 159 aaKnown RBP11.68□□□□□ -0.54
SMN2-216ENST00000638794 SULT1A1P50225 295 aa11.68□□□□□ -0.54
SMN2-216ENST00000638794 S100A10P60903 97 aa11.68□□□□□ -0.54
SMN2-216ENST00000638794 ESRGQ1W209 222 aa11.68□□□□□ -0.54
SMN2-216ENST00000638794 Q6ZTI0 123 aa11.68□□□□□ -0.54
SMN2-216ENST00000638794 C12orf45Q8N5I9 185 aaPredicted RBP11.68□□□□□ -0.54
SMN2-216ENST00000638794 H3BNG1 76 aa11.67□□□□□ -0.54
SMN2-216ENST00000638794 S100A11P31949 105 aa11.67□□□□□ -0.54
SMN2-216ENST00000638794 DAZ2Q13117 558 aaKnown RBP11.67□□□□□ -0.54
SMN2-216ENST00000638794 ERCC8Q13216 396 aa11.67□□□□□ -0.54
SMN2-216ENST00000638794 TMEM252Q8N6L7 170 aa11.67□□□□□ -0.54
SMN2-216ENST00000638794 MRPL53Q96EL3 112 aaKnown RBP11.67□□□□□ -0.54
SMN2-216ENST00000638794 UPK3BQ9BT76 320 aa11.67□□□□□ -0.54
SMN2-216ENST00000638794 Q9H3A6 140 aa11.67□□□□□ -0.54
SMN2-216ENST00000638794 C7orf71A4D174 169 aa11.66□□□□□ -0.54
SMN2-216ENST00000638794 NDUFB4O95168 129 aa11.66□□□□□ -0.54
SMN2-216ENST00000638794 SLC25A5P05141 298 aaKnown RBP11.66□□□□□ -0.54
SMN2-216ENST00000638794 FGF7P21781 194 aa11.66□□□□□ -0.54
SMN2-216ENST00000638794 IL15RAQ13261 267 aa11.66□□□□□ -0.54
SMN2-216ENST00000638794 RAB32Q13637 225 aa11.66□□□□□ -0.54
SMN2-216ENST00000638794 TTC32Q5I0X7 151 aa11.66□□□□□ -0.54
SMN2-216ENST00000638794 STX12Q86Y82 276 aa11.66□□□□□ -0.54
SMN2-216ENST00000638794 C11orf72Q8NBR9 251 aa11.66□□□□□ -0.54
SMN2-216ENST00000638794 GSN-AS1Q9NRJ2 163 aa11.66□□□□□ -0.54
SMN2-216ENST00000638794 TMEM14CQ9P0S9 112 aa11.66□□□□□ -0.54
SMN2-216ENST00000638794 KLLNB2CW77 178 aa11.65□□□□□ -0.54
SMN2-216ENST00000638794 H2AFB2P0C5Z0 115 aa11.65□□□□□ -0.54
SMN2-216ENST00000638794 PYYP10082 97 aa11.65□□□□□ -0.54
SMN2-216ENST00000638794 HBG1P69891 147 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms