RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 TIMM9Q9Y5J7 89 aa15.72■□□□□ 0.11
SCN1B-206ENST00000638536 ARPC5O15511 151 aa15.72■□□□□ 0.11
SCN1B-206ENST00000638536 NBEAP1P0C6P0 100 aa15.72■□□□□ 0.11
SCN1B-206ENST00000638536 OR11H4Q8NGC9 324 aa15.72■□□□□ 0.11
SCN1B-206ENST00000638536 TRAV12-2A0A075B6T6 113 aa15.71■□□□□ 0.11
SCN1B-206ENST00000638536 OR7C2O60412 319 aa15.71■□□□□ 0.11
SCN1B-206ENST00000638536 ZNF253O75346 499 aa15.71■□□□□ 0.11
SCN1B-206ENST00000638536 MIFP14174 115 aa15.71■□□□□ 0.11
SCN1B-206ENST00000638536 M6PRP20645 277 aa15.71■□□□□ 0.11
SCN1B-206ENST00000638536 RHOBP62745 196 aa15.71■□□□□ 0.11
SCN1B-206ENST00000638536 BAP18Q8IXM2 172 aa15.71■□□□□ 0.11
SCN1B-206ENST00000638536 RNF141Q8WVD5 230 aa15.71■□□□□ 0.11
SCN1B-206ENST00000638536 PRM2P04554 102 aa15.7■□□□□ 0.1
SCN1B-206ENST00000638536 NANOS2P60321 138 aaKnown RBP15.7■□□□□ 0.1
SCN1B-206ENST00000638536 KIR3DS1Q14943 382 aa15.7■□□□□ 0.1
SCN1B-206ENST00000638536 PHYHIPLQ96FC7 376 aa15.7■□□□□ 0.1
SCN1B-206ENST00000638536 HMGB3O15347 200 aaKnown RBP15.69■□□□□ 0.1
SCN1B-206ENST00000638536 PDE6HQ13956 83 aa15.69■□□□□ 0.1
SCN1B-206ENST00000638536 ACOT6Q3I5F7 207 aaPredicted RBP15.69■□□□□ 0.1
SCN1B-206ENST00000638536 ICAM4Q14773 271 aa15.68■□□□□ 0.1
SCN1B-206ENST00000638536 FAM122CQ6P4D5 195 aa15.68■□□□□ 0.1
SCN1B-206ENST00000638536 OR10G4Q8NGN3 311 aa15.68■□□□□ 0.1
SCN1B-206ENST00000638536 OR10G9Q8NGN4 311 aa15.68■□□□□ 0.1
SCN1B-206ENST00000638536 OR10G7Q8NGN6 311 aa15.68■□□□□ 0.1
SCN1B-206ENST00000638536 OR2G3Q8NGZ4 309 aa15.68■□□□□ 0.1
SCN1B-206ENST00000638536 IGF2BP2-AS1Q96M15 143 aa15.68■□□□□ 0.1
SCN1B-206ENST00000638536 BOLA2-SMG1P6H3BVE0 249 aa15.68■□□□□ 0.1
SCN1B-206ENST00000638536 RPP25LQ8N5L8 163 aaKnown RBP15.68■□□□□ 0.1
SCN1B-206ENST00000638536 PSMG3Q9BT73 122 aaPredicted RBP15.68■□□□□ 0.1
SCN1B-206ENST00000638536 CYTL1Q9NRR1 136 aa15.68■□□□□ 0.1
SCN1B-206ENST00000638536 CELA1Q9UNI1 258 aa15.68■□□□□ 0.1
SCN1B-206ENST00000638536 CXorf65A6NEN9 183 aa15.67■□□□□ 0.1
SCN1B-206ENST00000638536 ERCC8Q13216 396 aa15.67■□□□□ 0.1
SCN1B-206ENST00000638536 C11orf45Q8TAV5 145 aa15.67■□□□□ 0.1
SCN1B-206ENST00000638536 DNAH1Q9P2D7 4330 aa15.67■□□□□ 0.1
SCN1B-206ENST00000638536 RYR2Q92736 4967 aa15.67■□□□□ 0.1
SCN1B-206ENST00000638536 HYDINQ4G0P3 5121 aa15.66■□□□□ 0.1
SCN1B-206ENST00000638536 CT45A10P0DMU9 189 aa15.66■□□□□ 0.1
SCN1B-206ENST00000638536 UBE2L3P68036 154 aaKnown RBP15.66■□□□□ 0.1
SCN1B-206ENST00000638536 KHDC3LQ587J8 217 aa15.66■□□□□ 0.1
SCN1B-206ENST00000638536 Q6ZNX1 250 aa15.66■□□□□ 0.1
SCN1B-206ENST00000638536 OR10J6PQ8NGY7 276 aa15.66■□□□□ 0.1
SCN1B-206ENST00000638536 NEU1Q99519 415 aa15.66■□□□□ 0.1
SCN1B-206ENST00000638536 RANP62826 216 aaKnown RBP15.65■□□□□ 0.1
SCN1B-206ENST00000638536 MRPL53Q96EL3 112 aaKnown RBP15.65■□□□□ 0.1
SCN1B-206ENST00000638536 PPP1R14DQ9NXH3 145 aa15.65■□□□□ 0.1
SCN1B-206ENST00000638536 A0A1W2PPV4 95 aa15.65■□□□□ 0.1
SCN1B-206ENST00000638536 NPIPB6E9PJ23 425 aa15.65■□□□□ 0.1
SCN1B-206ENST00000638536 TAS2R45P59539 299 aa15.65■□□□□ 0.1
SCN1B-206ENST00000638536 SSX7Q7RTT5 188 aa15.65■□□□□ 0.1
SCN1B-206ENST00000638536 GOLT1BQ9Y3E0 138 aa15.65■□□□□ 0.1
SCN1B-206ENST00000638536 ALMS1Q8TCU4 4167 aa15.64■□□□□ 0.09
SCN1B-206ENST00000638536 ST6GAL2Q96JF0 529 aa15.64■□□□□ 0.09
SCN1B-206ENST00000638536 AAMDCQ9H7C9 122 aa15.64■□□□□ 0.09
SCN1B-206ENST00000638536 IGKV2-40A0A087WW87 121 aaPredicted RBP15.63■□□□□ 0.09
SCN1B-206ENST00000638536 BORCS7-ASMTA0A0B4J1R7 106 aa15.63■□□□□ 0.09
SCN1B-206ENST00000638536 INSP01308 110 aa15.63■□□□□ 0.09
SCN1B-206ENST00000638536 IGKV2D-40P01614 121 aaPredicted RBP15.63■□□□□ 0.09
SCN1B-206ENST00000638536 AMBPP02760 352 aa15.63■□□□□ 0.09
SCN1B-206ENST00000638536 CDKN1BP46527 198 aa15.63■□□□□ 0.09
SCN1B-206ENST00000638536 CDC34P49427 236 aaPredicted RBP15.63■□□□□ 0.09
SCN1B-206ENST00000638536 EMP1P54849 157 aa15.63■□□□□ 0.09
SCN1B-206ENST00000638536 SERF2P84101 59 aa15.63■□□□□ 0.09
SCN1B-206ENST00000638536 ZNF767PQ75MW2 155 aa15.63■□□□□ 0.09
SCN1B-206ENST00000638536 RAB24Q969Q5 203 aa15.63■□□□□ 0.09
SCN1B-206ENST00000638536 Q9H3A6 140 aa15.63■□□□□ 0.09
SCN1B-206ENST00000638536 PRELID1Q9Y255 219 aa15.63■□□□□ 0.09
SCN1B-206ENST00000638536 ZNF705GA8MUZ8 300 aaPredicted RBP15.62■□□□□ 0.09
SCN1B-206ENST00000638536 J3KRW8 73 aa15.62■□□□□ 0.09
SCN1B-206ENST00000638536 PHLDA1Q8WV24 401 aaPredicted RBP15.62■□□□□ 0.09
SCN1B-206ENST00000638536 VGLL1Q99990 258 aa15.62■□□□□ 0.09
SCN1B-206ENST00000638536 AGPAT4-IT1Q9H0P7 198 aa15.62■□□□□ 0.09
SCN1B-206ENST00000638536 SMIM9A6NGZ8 99 aa15.61■□□□□ 0.09
SCN1B-206ENST00000638536 ARL14EPLP0DKL9 152 aa15.61■□□□□ 0.09
SCN1B-206ENST00000638536 KCNRGQ8N5I3 272 aa15.61■□□□□ 0.09
SCN1B-206ENST00000638536 GNPNAT1Q96EK6 184 aaPredicted RBP15.61■□□□□ 0.09
SCN1B-206ENST00000638536 TMEM208Q9BTX3 173 aa15.61■□□□□ 0.09
SCN1B-206ENST00000638536 HMSDA8MTL9 139 aa15.61■□□□□ 0.09
SCN1B-206ENST00000638536 STAG3L2P0CL84 134 aa15.61■□□□□ 0.09
SCN1B-206ENST00000638536 STAG3L3P0CL85 134 aa15.61■□□□□ 0.09
SCN1B-206ENST00000638536 AZU1P20160 251 aa15.61■□□□□ 0.09
SCN1B-206ENST00000638536 GFI1BQ5VTD9 330 aa15.61■□□□□ 0.09
SCN1B-206ENST00000638536 CEMP1Q6PRD7 247 aaPredicted RBP15.61■□□□□ 0.09
SCN1B-206ENST00000638536 PQLC2Q6ZP29 291 aa15.61■□□□□ 0.09
SCN1B-206ENST00000638536 TAAR5O14804 337 aa15.6■□□□□ 0.09
SCN1B-206ENST00000638536 JTBO76095 146 aa15.6■□□□□ 0.09
SCN1B-206ENST00000638536 HBE1P02100 147 aa15.6■□□□□ 0.09
SCN1B-206ENST00000638536 ZNF726P1Q15940 193 aa15.6■□□□□ 0.09
SCN1B-206ENST00000638536 PLA2G2EQ9NZK7 142 aa15.6■□□□□ 0.09
SCN1B-206ENST00000638536 LOC102723971A0A1B0GUV8 181 aa15.59■□□□□ 0.09
SCN1B-206ENST00000638536 ZNF345Q14585 488 aa15.59■□□□□ 0.09
SCN1B-206ENST00000638536 Q6ZTC4 211 aa15.59■□□□□ 0.09
SCN1B-206ENST00000638536 FAM19A4Q96LR4 140 aa15.59■□□□□ 0.09
SCN1B-206ENST00000638536 MBP02144 154 aa15.58■□□□□ 0.09
SCN1B-206ENST00000638536 RRN3P1Q2M238 152 aa15.58■□□□□ 0.09
SCN1B-206ENST00000638536 C12orf74Q32Q52 190 aa15.58■□□□□ 0.09
SCN1B-206ENST00000638536 C9orf47Q6ZRZ4 202 aa15.58■□□□□ 0.09
SCN1B-206ENST00000638536 LYPD1Q8N2G4 141 aa15.58■□□□□ 0.09
SCN1B-206ENST00000638536 HYLS1Q96M11 299 aa15.58■□□□□ 0.09
SCN1B-206ENST00000638536 LINC01587Q99440 93 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms