RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 A8MWV9 139 aa12.96□□□□□ -0.33
CLN5-208ENST00000636183 XCL1P47992 114 aa12.96□□□□□ -0.33
CLN5-208ENST00000636183 DNAJC30Q96LL9 226 aa12.96□□□□□ -0.33
CLN5-208ENST00000636183 LINC01549A6NIU2 74 aa12.96□□□□□ -0.34
CLN5-208ENST00000636183 NRXN2Q9P2S2 1712 aa12.95□□□□□ -0.34
CLN5-208ENST00000636183 FANCD2OSQ96PS1 177 aa12.95□□□□□ -0.34
CLN5-208ENST00000636183 WDR83OSQ9Y284 106 aa12.95□□□□□ -0.34
CLN5-208ENST00000636183 TBX6O95947 436 aaPredicted RBP12.95□□□□□ -0.34
CLN5-208ENST00000636183 CLDN16Q9Y5I7 305 aa12.95□□□□□ -0.34
CLN5-208ENST00000636183 IGHV1OR15-1A0A075B7D0 117 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 C5orf63A6NC05 138 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 B3GALT5-AS1P59052 145 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 TMEM242Q9NWH2 141 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 DOCK4Q8N1I0 1966 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 GRNP28799 593 aaKnown RBP12.94□□□□□ -0.34
CLN5-208ENST00000636183 MEGF9Q9H1U4 602 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 APRG1Q8IVJ8 170 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 RNF183Q96D59 192 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 BUB3O43684 328 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 CRLF1O75462 422 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 LINC00518Q8N0U6 118 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 LOC285556D6RIA3 1793 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 RHODO00212 210 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 DEFB4AO15263 64 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 VPREB3Q9UKI3 123 aa12.94□□□□□ -0.34
CLN5-208ENST00000636183 CHCHD1Q96BP2 118 aaKnown RBP12.93□□□□□ -0.34
CLN5-208ENST00000636183 C2orf82Q6UX34 121 aa12.93□□□□□ -0.34
CLN5-208ENST00000636183 USF3Q68DE3 2245 aa12.93□□□□□ -0.34
CLN5-208ENST00000636183 CDKN1BP46527 198 aa12.93□□□□□ -0.34
CLN5-208ENST00000636183 Q6P435 159 aa12.92□□□□□ -0.34
CLN5-208ENST00000636183 DUX4L9Q6RFH8 374 aaPredicted RBP12.92□□□□□ -0.34
CLN5-208ENST00000636183 MTURNQ8N3F0 131 aa12.92□□□□□ -0.34
CLN5-208ENST00000636183 Q8NFD4 153 aa12.92□□□□□ -0.34
CLN5-208ENST00000636183 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.92□□□□□ -0.34
CLN5-208ENST00000636183 C17orf82Q86X59 251 aaPredicted RBP12.92□□□□□ -0.34
CLN5-208ENST00000636183 AMN1Q8IY45 258 aa12.92□□□□□ -0.34
CLN5-208ENST00000636183 WFDC1Q9HC57 220 aa12.92□□□□□ -0.34
CLN5-208ENST00000636183 A0A1W2PPI3 338 aa12.91□□□□□ -0.34
CLN5-208ENST00000636183 RNASE13Q5GAN3 156 aaKnown RBP12.91□□□□□ -0.34
CLN5-208ENST00000636183 SLURP1P55000 103 aa12.91□□□□□ -0.34
CLN5-208ENST00000636183 ZNF479Q96JC4 524 aa12.91□□□□□ -0.34
CLN5-208ENST00000636183 UBE2AP49459 152 aa12.91□□□□□ -0.34
CLN5-208ENST00000636183 KLHDC3Q9BQ90 382 aa12.91□□□□□ -0.34
CLN5-208ENST00000636183 I3L3M4 83 aa12.91□□□□□ -0.34
CLN5-208ENST00000636183 NTF4P34130 210 aa12.91□□□□□ -0.34
CLN5-208ENST00000636183 OCIAD2Q56VL3 154 aa12.91□□□□□ -0.34
CLN5-208ENST00000636183 OVOL2Q9BRP0 275 aa12.9□□□□□ -0.34
CLN5-208ENST00000636183 TP53TG1Q9Y2A0 90 aa12.9□□□□□ -0.34
CLN5-208ENST00000636183 XIRP1Q702N8 1843 aaKnown RBP12.9□□□□□ -0.34
CLN5-208ENST00000636183 IGLV10-54A0A075B6I4 117 aa12.9□□□□□ -0.34
CLN5-208ENST00000636183 NAA38Q9BRA0 125 aaKnown RBP12.9□□□□□ -0.34
CLN5-208ENST00000636183 PTPRFP10586 1907 aa12.9□□□□□ -0.34
CLN5-208ENST00000636183 CACNA1DQ01668 2161 aa12.9□□□□□ -0.34
CLN5-208ENST00000636183 IGHV4-30-2A0A087WSY4 118 aa12.9□□□□□ -0.34
CLN5-208ENST00000636183 NHLRC3Q5JS37 347 aa12.9□□□□□ -0.34
CLN5-208ENST00000636183 IGFL3Q6UXB1 125 aa12.9□□□□□ -0.34
CLN5-208ENST00000636183 GNB1LQ9BYB4 327 aa12.9□□□□□ -0.34
CLN5-208ENST00000636183 TEX36Q5VZQ5 186 aa12.9□□□□□ -0.34
CLN5-208ENST00000636183 GAGE2BQ13066 116 aa12.9□□□□□ -0.35
CLN5-208ENST00000636183 IGFBPL1Q8WX77 278 aa12.9□□□□□ -0.35
CLN5-208ENST00000636183 MRPL27Q9P0M9 148 aaKnown RBP12.89□□□□□ -0.35
CLN5-208ENST00000636183 TRAV12-1A0A0B4J245 112 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 HLA-DRB4P13762 266 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 SHANK2-AS3Q9BTD1 123 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 HLA-DRB4X5D2U9 266 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 NDUFA4O00483 81 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 RNASE2P10153 161 aaKnown RBP12.89□□□□□ -0.35
CLN5-208ENST00000636183 GREB1Q4ZG55 1949 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 ELANEP08246 267 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 RNF126Q9BV68 326 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 SMPXQ9UHP9 88 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 ID3Q02535 119 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 PLA2G2CQ5R387 149 aa12.89□□□□□ -0.35
CLN5-208ENST00000636183 AGMATQ9BSE5 352 aa12.88□□□□□ -0.35
CLN5-208ENST00000636183 RNF138Q8WVD3 245 aa12.88□□□□□ -0.35
CLN5-208ENST00000636183 HAMPP81172 84 aa12.88□□□□□ -0.35
CLN5-208ENST00000636183 ZNF581Q9P0T4 197 aa12.88□□□□□ -0.35
CLN5-208ENST00000636183 SBF1O95248 1867 aa12.88□□□□□ -0.35
CLN5-208ENST00000636183 NCOR1O75376 2440 aa12.88□□□□□ -0.35
CLN5-208ENST00000636183 LYPD3O95274 346 aa12.88□□□□□ -0.35
CLN5-208ENST00000636183 SPART-AS1P0CW21 52 aa12.88□□□□□ -0.35
CLN5-208ENST00000636183 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
CLN5-208ENST00000636183 SMAD5-AS1Q9Y6J3 95 aa12.88□□□□□ -0.35
CLN5-208ENST00000636183 NEGR1Q7Z3B1 354 aa12.87□□□□□ -0.35
CLN5-208ENST00000636183 TMEM14BQ9NUH8 114 aa12.87□□□□□ -0.35
CLN5-208ENST00000636183 SLAQ13239 276 aa12.87□□□□□ -0.35
CLN5-208ENST00000636183 NUP35Q8NFH5 326 aa12.87□□□□□ -0.35
CLN5-208ENST00000636183 GPHB5Q86YW7 130 aa12.87□□□□□ -0.35
CLN5-208ENST00000636183 SRSF8Q9BRL6 282 aaKnown RBP12.87□□□□□ -0.35
CLN5-208ENST00000636183 ICOSQ9Y6W8 199 aa12.87□□□□□ -0.35
CLN5-208ENST00000636183 LYPD1Q8N2G4 141 aa12.87□□□□□ -0.35
CLN5-208ENST00000636183 HS3ST6Q96QI5 342 aa12.87□□□□□ -0.35
CLN5-208ENST00000636183 IGHV4-28A0A0C4DH34 117 aa12.87□□□□□ -0.35
CLN5-208ENST00000636183 ETDCA0A1B0GVM5 59 aa12.87□□□□□ -0.35
CLN5-208ENST00000636183 COL4A6Q14031 1691 aa12.86□□□□□ -0.35
CLN5-208ENST00000636183 GLRX5Q86SX6 157 aa12.86□□□□□ -0.35
CLN5-208ENST00000636183 TRAV26-2A0A0B4J265 109 aa12.86□□□□□ -0.35
CLN5-208ENST00000636183 PKIGQ9Y2B9 76 aa12.86□□□□□ -0.35
CLN5-208ENST00000636183 RNF222A6NCQ9 220 aa12.86□□□□□ -0.35
CLN5-208ENST00000636183 K7EM74 188 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms