RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.88
SHPRH-211ENST00000629427 KNCNA6PVL3 124 aa9.52□□□□□ -0.88
SHPRH-211ENST00000629427 ATP6V0E1O15342 81 aa9.52□□□□□ -0.88
SHPRH-211ENST00000629427 RPRMLQ8N4K4 120 aa9.52□□□□□ -0.88
SHPRH-211ENST00000629427 TMEM190Q8WZ59 177 aa9.52□□□□□ -0.88
SHPRH-211ENST00000629427 TNCP24821 2201 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 NOTCH4Q99466 2003 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 hDV102S1A0JD36 115 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 AZU1P20160 251 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 C2orf16Q68DN1 1984 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 MRAPQ8TCY5 172 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 DLX4Q92988 240 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-211ENST00000629427 CLPSP04118 112 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 BCL6BQ8N143 479 aaPredicted RBP9.52□□□□□ -0.89
SHPRH-211ENST00000629427 TRAV8-3A0A0A6YYJ7 113 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 GUSBP1Q15486 140 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 C1orf122Q6ZSJ8 110 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 SIGMAR1Q99720 223 aa9.52□□□□□ -0.89
SHPRH-211ENST00000629427 AMN1Q8IY45 258 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 ZNF114Q8NC26 417 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 SRSF8Q9BRL6 282 aaKnown RBP9.51□□□□□ -0.89
SHPRH-211ENST00000629427 IGHV1-69DA0A0B4J2H0 117 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 IGHV1-69P01742 117 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 UBE2E1P51965 193 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 C17orf82Q86X59 251 aaPredicted RBP9.51□□□□□ -0.89
SHPRH-211ENST00000629427 KLHDC3Q9BQ90 382 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 TRBV25-1A0A075B6N4 114 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE12JA6NER3 117 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE1Q13065 139 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE4Q13068 117 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE5Q13069 117 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 TRPT1Q86TN4 253 aaKnown RBP9.51□□□□□ -0.89
SHPRH-211ENST00000629427 OVOL2Q9BRP0 275 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 NKAPP1Q8N9T2 125 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 KLK9Q9UKQ9 250 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 CXCL1P09341 107 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 B3GALT5-AS1P59052 145 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 NUP210Q8TEM1 1887 aaPredicted RBP9.51□□□□□ -0.89
SHPRH-211ENST00000629427 J3QKU1 62 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 HAPLN4Q86UW8 402 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 CRIPAKQ8N1N5 446 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 TMEM126AQ9H061 195 aa9.51□□□□□ -0.89
SHPRH-211ENST00000629427 IGHG3P01860 377 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 THAP8Q8NA92 274 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 NAA38Q9BRA0 125 aaKnown RBP9.5□□□□□ -0.89
SHPRH-211ENST00000629427 SNHG12Q9BXW3 62 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 A0A087X0K7 114 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 ARMS2P0C7Q2 107 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 NMSQ5H8A3 153 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 RNASE2P10153 161 aaKnown RBP9.5□□□□□ -0.89
SHPRH-211ENST00000629427 LHFPL1Q86WI0 220 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 PLXNA2O75051 1894 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 LHBP01229 141 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 ESDP10768 282 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 OCIAD2Q56VL3 154 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 LINC01551Q86U37 167 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 RPP25LQ8N5L8 163 aaKnown RBP9.5□□□□□ -0.89
SHPRH-211ENST00000629427 TNFRSF6BO95407 300 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 TCTEX1D4Q5JR98 221 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 ZNF581Q9P0T4 197 aa9.5□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE12BA1L429 117 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE7O76087 117 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE12FP0CL80 117 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE12GP0CL81 117 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE12IP0CL82 117 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 CR1LQ2VPA4 569 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 LY6G5BQ8NDX9 201 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 AMBPP02760 352 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 C8orf49Q96NF6 230 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 HIST1H2BLQ99880 126 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 TMEM242Q9NWH2 141 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 MED13Q9UHV7 2174 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 C15orf62A8K5M9 175 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 A0A1W2PPI3 338 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 TMEM14EPQ6UXP3 125 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 DENND4CQ5VZ89 1909 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 TANC1Q9C0D5 1861 aa9.49□□□□□ -0.89
SHPRH-211ENST00000629427 TMEM131Q92545 1883 aa9.48□□□□□ -0.89
SHPRH-211ENST00000629427 ZFAND6Q6FIF0 208 aa9.48□□□□□ -0.89
SHPRH-211ENST00000629427 RNF144BQ7Z419 303 aa9.48□□□□□ -0.89
SHPRH-211ENST00000629427 IGHV2-70DA0A0C4DH43 119 aa9.48□□□□□ -0.89
SHPRH-211ENST00000629427 PFN2P35080 140 aa9.48□□□□□ -0.89
SHPRH-211ENST00000629427 TRAV12-2A0A075B6T6 113 aa9.48□□□□□ -0.89
SHPRH-211ENST00000629427 G3V318 75 aa9.48□□□□□ -0.89
SHPRH-211ENST00000629427 MST1LQ2TV78 715 aa9.48□□□□□ -0.89
SHPRH-211ENST00000629427 CFHR2P36980 270 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 PMVKQ15126 192 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 RBMY1FQ15415 496 aaKnown RBP9.47□□□□□ -0.89
SHPRH-211ENST00000629427 LINC00479Q96M42 142 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 NDUFAF3Q9BU61 184 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 THSD7BQ9C0I4 1608 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 MCRIP2Q9BUT9 160 aaKnown RBP9.47□□□□□ -0.89
SHPRH-211ENST00000629427 TRBV6-6A0A0A6YYG2 114 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 A0A096LPF7 62 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE2BQ13066 116 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 GAGE2AQ6NT46 116 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 FGF16O43320 207 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 PAX9P55771 341 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 PDE6HQ13956 83 aa9.47□□□□□ -0.89
SHPRH-211ENST00000629427 SHANK2-AS3Q9BTD1 123 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 140.3 ms