RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 C10orf113Q5VZT2 155 aa13.13□□□□□ -0.31
SMN2-215ENST00000628696 TMEM37Q8WXS4 190 aa13.13□□□□□ -0.31
SMN2-215ENST00000628696 ZNF586Q9NXT0 402 aa13.13□□□□□ -0.31
SMN2-215ENST00000628696 PXMP4Q9Y6I8 212 aa13.13□□□□□ -0.31
SMN2-215ENST00000628696 NAP1L6A6NFF2 107 aa13.12□□□□□ -0.31
SMN2-215ENST00000628696 TAS2R30P59541 319 aa13.12□□□□□ -0.31
SMN2-215ENST00000628696 OPCMLQ14982 345 aa13.12□□□□□ -0.31
SMN2-215ENST00000628696 SPANXN2Q5MJ10 180 aa13.12□□□□□ -0.31
SMN2-215ENST00000628696 MORN5Q5VZ52 161 aa13.12□□□□□ -0.31
SMN2-215ENST00000628696 ZBTB8BQ8NAP8 495 aaPredicted RBP13.12□□□□□ -0.31
SMN2-215ENST00000628696 MGST2Q99735 147 aa13.12□□□□□ -0.31
SMN2-215ENST00000628696 UPK3BQ9BT76 320 aa13.12□□□□□ -0.31
SMN2-215ENST00000628696 TMPRSS5Q9H3S3 457 aa13.12□□□□□ -0.31
SMN2-215ENST00000628696 RCL1Q9Y2P8 373 aaKnown RBP13.12□□□□□ -0.31
SMN2-215ENST00000628696 H3BQ15 152 aa13.11□□□□□ -0.31
SMN2-215ENST00000628696 CT45A10P0DMU9 189 aa13.11□□□□□ -0.31
SMN2-215ENST00000628696 LEPP41159 167 aa13.11□□□□□ -0.31
SMN2-215ENST00000628696 TRIQKQ629K1 86 aa13.11□□□□□ -0.31
SMN2-215ENST00000628696 GGACTQ9BVM4 153 aa13.11□□□□□ -0.31
SMN2-215ENST00000628696 SRRQ9GZT4 340 aa13.11□□□□□ -0.31
SMN2-215ENST00000628696 MRPS16Q9Y3D3 137 aaKnown RBP13.11□□□□□ -0.31
SMN2-215ENST00000628696 APOBP04114 4563 aaKnown RBP13.1□□□□□ -0.31
SMN2-215ENST00000628696 A0A1W2PPQ1 181 aa13.1□□□□□ -0.31
SMN2-215ENST00000628696 H3BNG1 76 aa13.1□□□□□ -0.31
SMN2-215ENST00000628696 IGLC2P0DOY2 106 aa13.1□□□□□ -0.31
SMN2-215ENST00000628696 BAK1Q16611 211 aa13.1□□□□□ -0.31
SMN2-215ENST00000628696 Q6ZTI0 123 aa13.1□□□□□ -0.31
SMN2-215ENST00000628696 DNAJC4Q9NNZ3 241 aa13.1□□□□□ -0.31
SMN2-215ENST00000628696 DNAH5Q8TE73 4624 aa13.1□□□□□ -0.31
SMN2-215ENST00000628696 TRAV5A0A0B4J249 113 aa13.09□□□□□ -0.31
SMN2-215ENST00000628696 C7orf66A4D0T2 115 aa13.09□□□□□ -0.31
SMN2-215ENST00000628696 L7N2F9 121 aa13.09□□□□□ -0.31
SMN2-215ENST00000628696 MBPP02686 304 aaPredicted RBP13.09□□□□□ -0.31
SMN2-215ENST00000628696 CAMLGP49069 296 aa13.09□□□□□ -0.31
SMN2-215ENST00000628696 VAMP2P63027 116 aa13.09□□□□□ -0.31
SMN2-215ENST00000628696 Q6ZRG5 221 aa13.09□□□□□ -0.31
SMN2-215ENST00000628696 ZNF431Q8TF32 576 aaPredicted RBP13.09□□□□□ -0.31
SMN2-215ENST00000628696 SAT2Q96F10 170 aaPredicted RBP13.09□□□□□ -0.31
SMN2-215ENST00000628696 PYGO2Q9BRQ0 406 aa13.09□□□□□ -0.31
SMN2-215ENST00000628696 TRGV2A0A075B6R0 118 aa13.08□□□□□ -0.32
SMN2-215ENST00000628696 BTF3P20290 206 aaKnown RBP13.08□□□□□ -0.32
SMN2-215ENST00000628696 BCAP31P51572 246 aa13.08□□□□□ -0.32
SMN2-215ENST00000628696 DAZ2Q13117 558 aaKnown RBP13.08□□□□□ -0.32
SMN2-215ENST00000628696 RAB31Q13636 194 aa13.08□□□□□ -0.32
SMN2-215ENST00000628696 MIC13Q5XKP0 118 aa13.08□□□□□ -0.32
SMN2-215ENST00000628696 ODF3Q96PU9 254 aa13.08□□□□□ -0.32
SMN2-215ENST00000628696 NPIPB6E9PJ23 425 aa13.07□□□□□ -0.32
SMN2-215ENST00000628696 NRARPQ7Z6K4 114 aa13.07□□□□□ -0.32
SMN2-215ENST00000628696 VSIG2Q96IQ7 327 aa13.07□□□□□ -0.32
SMN2-215ENST00000628696 GSN-AS1Q9NRJ2 163 aa13.07□□□□□ -0.32
SMN2-215ENST00000628696 LSM5Q9Y4Y9 91 aaKnown RBP13.07□□□□□ -0.32
SMN2-215ENST00000628696 A0A096LPF7 62 aa13.06□□□□□ -0.32
SMN2-215ENST00000628696 TRGV1A0A0A0MS02 117 aa13.06□□□□□ -0.32
SMN2-215ENST00000628696 CENPXA8MT69 81 aa13.06□□□□□ -0.32
SMN2-215ENST00000628696 CCSO14618 274 aa13.06□□□□□ -0.32
SMN2-215ENST00000628696 LINC00315P59091 139 aa13.06□□□□□ -0.32
SMN2-215ENST00000628696 ERCC8Q13216 396 aa13.06□□□□□ -0.32
SMN2-215ENST00000628696 ZNF846Q147U1 533 aa13.06□□□□□ -0.32
SMN2-215ENST00000628696 GUK1Q16774 197 aa13.06□□□□□ -0.32
SMN2-215ENST00000628696 OR1L4Q8NGR5 311 aa13.06□□□□□ -0.32
SMN2-215ENST00000628696 MITD1Q8WV92 249 aa13.06□□□□□ -0.32
SMN2-215ENST00000628696 C7orf71A4D174 169 aa13.05□□□□□ -0.32
SMN2-215ENST00000628696 FAM25EA8MYX2 175 aa13.05□□□□□ -0.32
SMN2-215ENST00000628696 CST7O76096 145 aa13.05□□□□□ -0.32
SMN2-215ENST00000628696 SLC25A5P05141 298 aaKnown RBP13.04□□□□□ -0.32
SMN2-215ENST00000628696 BTCP35070 178 aa13.04□□□□□ -0.32
SMN2-215ENST00000628696 CAV2P51636 162 aa13.04□□□□□ -0.32
SMN2-215ENST00000628696 ZNF680Q8NEM1 530 aa13.04□□□□□ -0.32
SMN2-215ENST00000628696 PFDN5Q99471 154 aa13.04□□□□□ -0.32
SMN2-215ENST00000628696 FUT9Q9Y231 359 aa13.04□□□□□ -0.32
SMN2-215ENST00000628696 FAM24AA6NFZ4 105 aa13.03□□□□□ -0.32
SMN2-215ENST00000628696 M0R3E3 92 aa13.03□□□□□ -0.32
SMN2-215ENST00000628696 SIVA1O15304 175 aa13.03□□□□□ -0.32
SMN2-215ENST00000628696 RNASE4P34096 147 aaKnown RBP13.03□□□□□ -0.32
SMN2-215ENST00000628696 CD300CQ08708 224 aa13.03□□□□□ -0.32
SMN2-215ENST00000628696 C11orf72Q8NBR9 251 aa13.03□□□□□ -0.32
SMN2-215ENST00000628696 UQCC1Q9NVA1 299 aa13.03□□□□□ -0.32
SMN2-215ENST00000628696 FUSP35637 526 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMN2-215ENST00000628696 BTN1A1Q13410 526 aa13.02□□□□□ -0.33
SMN2-215ENST00000628696 C12orf45Q8N5I9 185 aaPredicted RBP13.02□□□□□ -0.33
SMN2-215ENST00000628696 EIF4E3Q8N5X7 224 aaKnown RBP13.02□□□□□ -0.33
SMN2-215ENST00000628696 C20orf85Q9H1P6 137 aa13.02□□□□□ -0.33
SMN2-215ENST00000628696 WDR83OSQ9Y284 106 aa13.02□□□□□ -0.33
SMN2-215ENST00000628696 KLF12Q9Y4X4 402 aa13.02□□□□□ -0.33
SMN2-215ENST00000628696 TRBV19A0A075B6N1 114 aa13.01□□□□□ -0.33
SMN2-215ENST00000628696 C5orf51A6NDU8 294 aa13.01□□□□□ -0.33
SMN2-215ENST00000628696 PAX4O43316 350 aa13.01□□□□□ -0.33
SMN2-215ENST00000628696 ZNF253O75346 499 aa13.01□□□□□ -0.33
SMN2-215ENST00000628696 IGHV3-53P01767 116 aa13.01□□□□□ -0.33
SMN2-215ENST00000628696 BAXQ07812 192 aa13.01□□□□□ -0.33
SMN2-215ENST00000628696 LINC00477Q96M19 166 aa13.01□□□□□ -0.33
SMN2-215ENST00000628696 SDHCQ99643 169 aaPredicted RBP13.01□□□□□ -0.33
SMN2-215ENST00000628696 AGPAT4-IT1Q9H0P7 198 aa13.01□□□□□ -0.33
SMN2-215ENST00000628696 SLC39A9Q9NUM3 307 aa13.01□□□□□ -0.33
SMN2-215ENST00000628696 TIMM9Q9Y5J7 89 aa13.01□□□□□ -0.33
SMN2-215ENST00000628696 UBE2L5PA0A1B0GUS4 154 aa13□□□□□ -0.33
SMN2-215ENST00000628696 EPM2AB3EWF7 344 aa13□□□□□ -0.33
SMN2-215ENST00000628696 EREGO14944 169 aa13□□□□□ -0.33
SMN2-215ENST00000628696 MPDU1O75352 247 aa13□□□□□ -0.33
SMN2-215ENST00000628696 ZNF324O75467 553 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms