RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SCGB1A1P11684 91 aa12.92□□□□□ -0.34
GABRB3-215ENST00000622697 H3BRM9 83 aa12.92□□□□□ -0.34
GABRB3-215ENST00000622697 YPEL3P61236 119 aaPredicted RBP12.92□□□□□ -0.34
GABRB3-215ENST00000622697 HTN3P15516 51 aa12.91□□□□□ -0.34
GABRB3-215ENST00000622697 RHPN1-AS1Q9BWJ2 59 aa12.91□□□□□ -0.34
GABRB3-215ENST00000622697 OVOL3O00110 214 aa12.91□□□□□ -0.34
GABRB3-215ENST00000622697 IGFL3Q6UXB1 125 aa12.91□□□□□ -0.34
GABRB3-215ENST00000622697 C9orf139Q6ZV77 190 aa12.91□□□□□ -0.34
GABRB3-215ENST00000622697 KRTAP27-1Q3LI81 207 aa12.91□□□□□ -0.34
GABRB3-215ENST00000622697 C3orf36Q3SXR2 165 aa12.91□□□□□ -0.34
GABRB3-215ENST00000622697 IL17RELQ6ZVW7 336 aa12.91□□□□□ -0.34
GABRB3-215ENST00000622697 OR9G4Q8NGQ1 327 aa12.91□□□□□ -0.34
GABRB3-215ENST00000622697 CSTL1Q9H114 145 aa12.91□□□□□ -0.34
GABRB3-215ENST00000622697 ZNF876PQ49A33 203 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 SAMD13Q5VXD3 122 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 MAPK1IP1LQ8NDC0 245 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 GFRA4Q9GZZ7 299 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 PRR20EP86478 221 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 PRR20CP86479 221 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 PRR20DP86480 221 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 PRR20BP86481 221 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 PRR20AP86496 221 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 COPS9Q8WXC6 57 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 FXYD5Q96DB9 178 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 SMIM27A0A1W2PRY6 76 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 TNFRSF6BO95407 300 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 C17orf77Q96MU5 243 aa12.9□□□□□ -0.34
GABRB3-215ENST00000622697 K7ENP7 123 aa12.9□□□□□ -0.35
GABRB3-215ENST00000622697 LCNL1Q6ZST4 164 aa12.89□□□□□ -0.35
GABRB3-215ENST00000622697 TMEM75Q8N9X5 138 aa12.89□□□□□ -0.35
GABRB3-215ENST00000622697 DPH3P1Q9H4G8 78 aa12.89□□□□□ -0.35
GABRB3-215ENST00000622697 WISP2O76076 250 aa12.89□□□□□ -0.35
GABRB3-215ENST00000622697 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
GABRB3-215ENST00000622697 ZNF492Q9P255 531 aa12.89□□□□□ -0.35
GABRB3-215ENST00000622697 ARFGEF3Q5TH69 2177 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 PLA2G5P39877 138 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 NCOR1P1Q9H4R4 102 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 KIR3DS1Q14943 382 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 Q6ZSR3 168 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 LINC00477Q96M19 166 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 CTSZQ9UBR2 303 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 SMPXQ9UHP9 88 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 TRAV8-2A0A0B4J237 113 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 TSPAN13O95857 204 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 PDE6HQ13956 83 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 MAJINQ3KP22 176 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 TRGV11A0A075B6L2 103 aa12.88□□□□□ -0.35
GABRB3-215ENST00000622697 NCOA6Q14686 2063 aaPredicted RBP12.88□□□□□ -0.35
GABRB3-215ENST00000622697 TRAV26-2A0A0B4J265 109 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 ZC2HC1AQ96GY0 325 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 PCDH15Q96QU1 1955 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 IGHV1-24A0A0C4DH33 117 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 GRNP28799 593 aaKnown RBP12.87□□□□□ -0.35
GABRB3-215ENST00000622697 PIP4P2Q8N4L2 257 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 OR5A1Q8NGJ0 315 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 B4DSR2 109 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 UBE2V1Q13404 147 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 ARHGAP21Q5T5U3 1957 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 PRSS57Q6UWY2 283 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 SRSF8Q9BRL6 282 aaKnown RBP12.87□□□□□ -0.35
GABRB3-215ENST00000622697 C11orf52Q96A22 123 aa12.87□□□□□ -0.35
GABRB3-215ENST00000622697 A0A1W2PNU3 283 aaPredicted RBP12.86□□□□□ -0.35
GABRB3-215ENST00000622697 IGHV3-53P01767 116 aa12.86□□□□□ -0.35
GABRB3-215ENST00000622697 IGLC1P0CG04 106 aa12.86□□□□□ -0.35
GABRB3-215ENST00000622697 IGLC2P0DOY2 106 aa12.86□□□□□ -0.35
GABRB3-215ENST00000622697 IGLC3P0DOY3 106 aa12.86□□□□□ -0.35
GABRB3-215ENST00000622697 NSUN5P1Q3KNT7 163 aa12.86□□□□□ -0.35
GABRB3-215ENST00000622697 TDGF1P13385 188 aa12.86□□□□□ -0.35
GABRB3-215ENST00000622697 FAM104BQ5XKR9 115 aa12.86□□□□□ -0.35
GABRB3-215ENST00000622697 LINC00311Q8N616 119 aa12.86□□□□□ -0.35
GABRB3-215ENST00000622697 IGLL1P15814 213 aa12.86□□□□□ -0.35
GABRB3-215ENST00000622697 ZNF106Q9H2Y7 1883 aaKnown RBP12.86□□□□□ -0.35
GABRB3-215ENST00000622697 TRBV7-9A0A0J9YWB2 115 aa12.85□□□□□ -0.35
GABRB3-215ENST00000622697 SYNJ2BPP57105 145 aa12.85□□□□□ -0.35
GABRB3-215ENST00000622697 PCNX3Q9H6A9 2034 aa12.85□□□□□ -0.35
GABRB3-215ENST00000622697 GAGE13Q4V321 117 aa12.85□□□□□ -0.35
GABRB3-215ENST00000622697 RITA1Q96K30 269 aa12.85□□□□□ -0.35
GABRB3-215ENST00000622697 UBE2E1P51965 193 aa12.85□□□□□ -0.35
GABRB3-215ENST00000622697 VWC2Q2TAL6 325 aa12.85□□□□□ -0.35
GABRB3-215ENST00000622697 MRPL51Q4U2R6 128 aaKnown RBP12.85□□□□□ -0.35
GABRB3-215ENST00000622697 MORN5Q5VZ52 161 aa12.85□□□□□ -0.35
GABRB3-215ENST00000622697 KIAA1549LQ6ZVL6 1849 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 HLA-DMBP28068 263 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 DKK4Q9UBT3 224 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 H3BRN7 92 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 NDUFS7O75251 213 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 FAM120AOSQ5T036 256 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 FAM110DQ8TAY7 271 aaPredicted RBP12.84□□□□□ -0.35
GABRB3-215ENST00000622697 VGLL1Q99990 258 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 COX11Q9Y6N1 276 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 TRGV4A0A0C4DH28 118 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 FAM223BA6NKX1 122 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 OBSL1O75147 1896 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 PAX2Q02962 417 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 FAM223AQ8IWN6 122 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 PRR25Q96S07 402 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 NUPR1O60356 82 aa12.84□□□□□ -0.35
GABRB3-215ENST00000622697 IGLV2-14P01704 120 aa12.83□□□□□ -0.35
GABRB3-215ENST00000622697 NPSP0C0P6 89 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms