RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 MEIS3P1A6NDR6 274 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 C3orf84H3BNL1 204 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 RPL28P46779 137 aaKnown RBP2.31□□□□□ -2.04
LRRC39-204ENST00000620882 EBI3Q14213 229 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 Q6ZS92 163 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 Q8IYB0 196 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 KCNRGQ8N5I3 272 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 BPIFB6Q8NFQ5 453 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 ZNF714Q96N38 554 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 SLC35B3Q9H1N7 401 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 CCDC167Q9P0B6 97 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 MAP3K1Q13233 1512 aa2.31□□□□□ -2.04
LRRC39-204ENST00000620882 IGLV3-12A0A075B6K2 115 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 IGHV1-3A0A0C4DH29 117 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 C17orf98A8MV24 154 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 ADGRB1O14514 1584 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 RPL27AP46776 148 aaKnown RBP2.3□□□□□ -2.04
LRRC39-204ENST00000620882 DOCK1Q14185 1865 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 ERICH3Q5RHP9 1530 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 EIF5AL1Q6IS14 154 aaKnown RBP2.3□□□□□ -2.04
LRRC39-204ENST00000620882 MIR7-3HGQ8N6C7 128 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 SIGLECL1Q8N7X8 197 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 Q8N9L7 120 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 Q8NDZ9 215 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 AQP3Q92482 292 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 RMI2Q96E14 147 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 LINC00526Q96FQ7 95 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 GINS4Q9BRT9 223 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 ARAP2Q8WZ64 1704 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 PTPRTO14522 1441 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 LOC107986453A0A1B0GWG9 222 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 A6NN06 94 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 NMBP08949 121 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 SLC25A16P16260 332 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 ZNF322Q6U7Q0 402 aaPredicted RBP2.3□□□□□ -2.04
LRRC39-204ENST00000620882 LYZL1Q6UWQ5 148 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 ZNF720Q7Z2F6 126 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 LYZL2Q7Z4W2 148 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 OR4X2Q8NGF9 303 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 LCN9Q8WX39 176 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 IMMP2LQ96T52 175 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 NABP2Q9BQ15 211 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 ARHGAP32A7KAX9 2087 aa2.3□□□□□ -2.04
LRRC39-204ENST00000620882 AHDC1Q5TGY3 1603 aaPredicted RBP2.29□□□□□ -2.04
LRRC39-204ENST00000620882 ADGRB3O60242 1522 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 NAIPQ13075 1403 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 RBAKDNA6NC62 111 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 K7ERS5 55 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 SH2D1AO60880 128 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 IGHV1-69P01742 117 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 FUSP35637 526 aaKnown RBP eCLIP2.29□□□□□ -2.04
LRRC39-204ENST00000620882 BLCAPP62952 87 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 EIF4EBP1Q13541 118 aaPredicted RBP2.29□□□□□ -2.04
LRRC39-204ENST00000620882 NOXRED1Q6NXP6 359 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 SDIM1Q6ZPB5 146 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 TMEM105Q8N8V8 129 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 PFN4Q8NHR9 129 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 CLEC2BQ92478 149 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 ATG5Q9H1Y0 275 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 RPL26L1Q9UNX3 145 aaKnown RBP2.29□□□□□ -2.04
LRRC39-204ENST00000620882 ICOSQ9Y6W8 199 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 NRKQ7Z2Y5 1582 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 CCDC88CQ9P219 2028 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 RP1P56715 2156 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 CHD1O14646 1710 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 IGLV3-16A0A075B6K0 115 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 TRAV3A0A0B4J244 114 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 MCRIP1C9JLW8 97 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 IGLV1-51P01701 117 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 IGHV1-46P01743 117 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 PRB4P10163 310 aaPredicted RBP2.29□□□□□ -2.04
LRRC39-204ENST00000620882 TPT1P13693 172 aaKnown RBP2.29□□□□□ -2.04
LRRC39-204ENST00000620882 SNCAP37840 140 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 HIST1H4AP62805 103 aaKnown RBP2.29□□□□□ -2.04
LRRC39-204ENST00000620882 KLRD1Q13241 179 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 UBE2SQ16763 222 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 Q56UQ5 140 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 SMCR5Q8TEV8 140 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 VAMP8Q9BV40 100 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 KLK12Q9UKR0 248 aa2.29□□□□□ -2.04
LRRC39-204ENST00000620882 NINQ8N4C6 2090 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 BAZ1AQ9NRL2 1556 aaPredicted RBP2.28□□□□□ -2.04
LRRC39-204ENST00000620882 PCNX2A6NKB5 2137 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 SHANK3Q9BYB0 1731 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 MYH8P13535 1937 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 IGKV2D-26A0A0A0MRZ7 120 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 RPL36A-HNRNPH2H7BZ11 118 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 CPSF4O95639 269 aaKnown RBP2.28□□□□□ -2.04
LRRC39-204ENST00000620882 TCL1BO95988 128 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 LHBP01229 141 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 KRTAP10-3P60369 221 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 TMEM155Q4W5P6 130 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 ALKAL2Q6UX46 152 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 SVBPQ8N300 66 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 SPANXA2-OT1Q8N9U9 137 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 TSKUQ8WUA8 353 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 FGF13Q92913 245 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 SCGB3A1Q96QR1 104 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 DPY30Q9C005 99 aa2.28□□□□□ -2.04
LRRC39-204ENST00000620882 RBBP6Q7Z6E9 1792 aaKnown RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms