RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 DEFB130BP0DP73 79 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 DEFB130AP0DP74 79 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 HTN1P15515 57 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 TAS2R60P59551 318 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 NHLH2Q02577 135 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 GCSAMLQ5JQS6 135 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 TMEM256Q8N2U0 113 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 CHAC2Q8WUX2 184 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 KRTAP3-3Q9BYR6 98 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 KRTAP3-2Q9BYR7 98 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 PTTG2Q9NZH5 202 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 OR5AC2Q9NZP5 309 aa12.13□□□□□ -0.47
HMGN3-203ENST00000620514 INMT-MINDY4F8WBC2 141 aa12.12□□□□□ -0.47
HMGN3-203ENST00000620514 H0YIZ8 118 aa12.12□□□□□ -0.47
HMGN3-203ENST00000620514 M0R2N4 97 aa12.12□□□□□ -0.47
HMGN3-203ENST00000620514 LRRC37A5PQ49AS3 106 aa12.12□□□□□ -0.47
HMGN3-203ENST00000620514 OR10J6PQ8NGY7 276 aa12.12□□□□□ -0.47
HMGN3-203ENST00000620514 THAP6Q8TBB0 222 aa12.12□□□□□ -0.47
HMGN3-203ENST00000620514 NPCDR1Q9BY65 106 aa12.12□□□□□ -0.47
HMGN3-203ENST00000620514 GUK1Q16774 197 aa12.11□□□□□ -0.47
HMGN3-203ENST00000620514 OR5C1Q8NGR4 320 aa12.11□□□□□ -0.47
HMGN3-203ENST00000620514 DNAH2Q9P225 4427 aa12.11□□□□□ -0.47
HMGN3-203ENST00000620514 TRBV19A0A075B6N1 114 aa12.1□□□□□ -0.47
HMGN3-203ENST00000620514 J3KRW8 73 aa12.1□□□□□ -0.47
HMGN3-203ENST00000620514 PRAF2O60831 178 aa12.1□□□□□ -0.47
HMGN3-203ENST00000620514 RLN2P04090 185 aa12.1□□□□□ -0.47
HMGN3-203ENST00000620514 CT45A10P0DMU9 189 aa12.1□□□□□ -0.47
HMGN3-203ENST00000620514 PYYP10082 97 aa12.1□□□□□ -0.47
HMGN3-203ENST00000620514 GFI1BQ5VTD9 330 aa12.1□□□□□ -0.47
HMGN3-203ENST00000620514 UBE2DNLQ8IWF7 75 aa12.1□□□□□ -0.47
HMGN3-203ENST00000620514 NMES1Q9C002 83 aa12.1□□□□□ -0.47
HMGN3-203ENST00000620514 HECTD4Q9Y4D8 3996 aa12.1□□□□□ -0.47
HMGN3-203ENST00000620514 DNAH17Q9UFH2 4485 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 IGLV2-18A0A075B6J9 118 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 E5RGE8 158 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 NPIPB6E9PJ23 425 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 M0R3E3 92 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 MPDU1O75352 247 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 NDUFB4O95168 129 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 H2BFSP57053 126 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 CLINT1Q14677 625 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 RNASE8Q8TDE3 154 aaKnown RBP12.09□□□□□ -0.47
HMGN3-203ENST00000620514 C16orf74Q96GX8 76 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 SLC25A31Q9H0C2 315 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 TMEM14CQ9P0S9 112 aa12.09□□□□□ -0.47
HMGN3-203ENST00000620514 H7BYZ3 331 aa12.08□□□□□ -0.48
HMGN3-203ENST00000620514 ZNF253O75346 499 aa12.08□□□□□ -0.48
HMGN3-203ENST00000620514 HIST1H1EP10412 219 aaKnown RBP12.08□□□□□ -0.48
HMGN3-203ENST00000620514 ERCC8Q13216 396 aa12.08□□□□□ -0.48
HMGN3-203ENST00000620514 C20orf144Q9BQM9 153 aa12.08□□□□□ -0.48
HMGN3-203ENST00000620514 MARVELD1Q9BSK0 173 aa12.08□□□□□ -0.48
HMGN3-203ENST00000620514 SLC25A2Q9BXI2 301 aa12.08□□□□□ -0.48
HMGN3-203ENST00000620514 NOP10Q9NPE3 64 aaKnown RBP12.08□□□□□ -0.48
HMGN3-203ENST00000620514 TIMM8BQ9Y5J9 83 aaPredicted RBP12.08□□□□□ -0.48
HMGN3-203ENST00000620514 FAT2Q9NYQ8 4349 aa12.07□□□□□ -0.48
HMGN3-203ENST00000620514 F5H768 121 aa12.07□□□□□ -0.48
HMGN3-203ENST00000620514 ZNF493Q6ZR52 646 aa12.07□□□□□ -0.48
HMGN3-203ENST00000620514 MIR17HGQ75NE6 70 aa12.07□□□□□ -0.48
HMGN3-203ENST00000620514 TMEM263Q8WUH6 116 aaKnown RBP12.07□□□□□ -0.48
HMGN3-203ENST00000620514 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
HMGN3-203ENST00000620514 TIMM9Q9Y5J7 89 aa12.07□□□□□ -0.48
HMGN3-203ENST00000620514 TRAV12-3A0A0B4J271 114 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 CBY3A6NI87 242 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 RTL8CO15255 209 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 ATP5G1P05496 136 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 LEPP41159 167 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 ATP5G3P48201 142 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 CYCSP99999 105 aaKnown RBP12.06□□□□□ -0.48
HMGN3-203ENST00000620514 EXOC3-AS1Q8N2X6 119 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 PPP1R1CQ8WVI7 109 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 MRPL53Q96EL3 112 aaKnown RBP12.06□□□□□ -0.48
HMGN3-203ENST00000620514 FAM167A-AS1Q96KT0 104 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 ODF3Q96PU9 254 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 WDR61Q9GZS3 305 aaKnown RBP12.06□□□□□ -0.48
HMGN3-203ENST00000620514 HERC2O95714 4834 aa12.06□□□□□ -0.48
HMGN3-203ENST00000620514 LGALS9BQ3B8N2 356 aa12.05□□□□□ -0.48
HMGN3-203ENST00000620514 RNF212Q495C1 297 aa12.05□□□□□ -0.48
HMGN3-203ENST00000620514 LINC00336Q6ZUF6 198 aa12.05□□□□□ -0.48
HMGN3-203ENST00000620514 C15orf53Q8NAA6 179 aa12.05□□□□□ -0.48
HMGN3-203ENST00000620514 NACAE9PAV3 2078 aa12.04□□□□□ -0.48
HMGN3-203ENST00000620514 SSNA1O43805 119 aa12.04□□□□□ -0.48
HMGN3-203ENST00000620514 DEFA1P59665 94 aa12.04□□□□□ -0.48
HMGN3-203ENST00000620514 DEFA3P59666 94 aa12.04□□□□□ -0.48
HMGN3-203ENST00000620514 PDE6HQ13956 83 aa12.04□□□□□ -0.48
HMGN3-203ENST00000620514 Q6ZR54 194 aa12.04□□□□□ -0.48
HMGN3-203ENST00000620514 CCDC28AQ8IWP9 274 aa12.04□□□□□ -0.48
HMGN3-203ENST00000620514 AGPAT4-IT1Q9H0P7 198 aa12.04□□□□□ -0.48
HMGN3-203ENST00000620514 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
HMGN3-203ENST00000620514 NUDT3O95989 172 aa12.03□□□□□ -0.48
HMGN3-203ENST00000620514 ICAM4Q14773 271 aa12.03□□□□□ -0.48
HMGN3-203ENST00000620514 IGKV2-40A0A087WW87 121 aaPredicted RBP12.02□□□□□ -0.49
HMGN3-203ENST00000620514 A0A1B0GVY2 172 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 MPC2O95563 127 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 IGKV2D-40P01614 121 aaPredicted RBP12.02□□□□□ -0.49
HMGN3-203ENST00000620514 OR10J4P0C629 311 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 CD300CQ08708 224 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 FAM122CQ6P4D5 195 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 LINC00612Q8N6U2 182 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 FXYD5Q96DB9 178 aa12.02□□□□□ -0.49
HMGN3-203ENST00000620514 FAM19A4Q96LR4 140 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms