RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 NDPQ00604 133 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 FAM106AQ4KMX7 169 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 IGFL4Q6B9Z1 124 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 DYNAPQ8N1N2 210 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 ORAOV1Q8WV07 137 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 RAB1BQ9H0U4 201 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 HSPB8Q9UJY1 196 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 COX11Q9Y6N1 276 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 IGLV11-55A0A075B6I3 123 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 IGKV2-40A0A087WW87 121 aaPredicted RBP9.24□□□□□ -0.93
C11orf54-215ENST00000617482 IGHV3-35A0A0C4DH35 117 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 TMEM213A2RRL7 107 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 F8W735 103 aaPredicted RBP9.24□□□□□ -0.93
C11orf54-215ENST00000617482 IGKV2D-40P01614 121 aaPredicted RBP9.24□□□□□ -0.93
C11orf54-215ENST00000617482 LYZL1Q6UWQ5 148 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 PRSS57Q6UWY2 283 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 ARPC1AQ92747 370 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 TIMD4Q96H15 378 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 MED13LQ71F56 2210 aa9.24□□□□□ -0.93
C11orf54-215ENST00000617482 IGF2RP11717 2491 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 TRAV30A0A087WSZ9 112 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 IFI27P40305 119 aaPredicted RBP9.23□□□□□ -0.93
C11orf54-215ENST00000617482 PET117Q6UWS5 81 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 ZNF562Q6V9R5 426 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 FA2HQ7L5A8 372 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 ERASQ7Z444 233 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 ZNF738Q8NE65 137 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 ZNF479Q96JC4 524 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 C21orf62Q9NYP8 219 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 TMEM189A5PLL7 270 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 NUDT3O95989 172 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 PRTN3P24158 256 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 CSN1S1P47710 185 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 SLC25A34Q6PIV7 304 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 ATRXP46100 2492 aa9.23□□□□□ -0.93
C11orf54-215ENST00000617482 ODF3BA8MYP8 253 aa9.22□□□□□ -0.93
C11orf54-215ENST00000617482 D6R8Y8 96 aa9.22□□□□□ -0.93
C11orf54-215ENST00000617482 SH2D1AO60880 128 aa9.22□□□□□ -0.93
C11orf54-215ENST00000617482 LOXL1Q08397 574 aaPredicted RBP9.22□□□□□ -0.93
C11orf54-215ENST00000617482 AMN1Q8IY45 258 aa9.22□□□□□ -0.93
C11orf54-215ENST00000617482 HRNRQ86YZ3 2850 aaPredicted RBP9.22□□□□□ -0.93
C11orf54-215ENST00000617482 NPIPB5A8MRT5 1133 aa9.22□□□□□ -0.93
C11orf54-215ENST00000617482 NCR2O95944 276 aa9.22□□□□□ -0.93
C11orf54-215ENST00000617482 FXYD7P58549 80 aa9.22□□□□□ -0.93
C11orf54-215ENST00000617482 PDE6HQ13956 83 aa9.22□□□□□ -0.93
C11orf54-215ENST00000617482 Q8TAT8 98 aa9.22□□□□□ -0.93
C11orf54-215ENST00000617482 ZNF747Q9BV97 191 aa9.22□□□□□ -0.93
C11orf54-215ENST00000617482 A0A1B0GW15 77 aa9.21□□□□□ -0.93
C11orf54-215ENST00000617482 M0R1W7 72 aa9.21□□□□□ -0.93
C11orf54-215ENST00000617482 HLA-DMBP28068 263 aa9.21□□□□□ -0.93
C11orf54-215ENST00000617482 NHLH1Q02575 133 aa9.21□□□□□ -0.93
C11orf54-215ENST00000617482 Q6AWC8 147 aa9.21□□□□□ -0.93
C11orf54-215ENST00000617482 VMO1Q7Z5L0 202 aa9.21□□□□□ -0.93
C11orf54-215ENST00000617482 S100A7AQ86SG5 101 aa9.21□□□□□ -0.93
C11orf54-215ENST00000617482 SCRT2Q9NQ03 307 aa9.21□□□□□ -0.93
C11orf54-215ENST00000617482 SNAI2O43623 268 aa9.21□□□□□ -0.94
C11orf54-215ENST00000617482 FBXL19-AS1Q494R0 122 aa9.21□□□□□ -0.94
C11orf54-215ENST00000617482 LINC01545Q5VT33 79 aa9.21□□□□□ -0.94
C11orf54-215ENST00000617482 TTC9CQ8N5M4 171 aa9.21□□□□□ -0.94
C11orf54-215ENST00000617482 OR10AG1Q8NH19 301 aa9.21□□□□□ -0.94
C11orf54-215ENST00000617482 ZNF48Q96MX3 618 aaPredicted RBP9.21□□□□□ -0.94
C11orf54-215ENST00000617482 VGLL1Q99990 258 aa9.21□□□□□ -0.94
C11orf54-215ENST00000617482 WNK2Q9Y3S1 2297 aa9.21□□□□□ -0.94
C11orf54-215ENST00000617482 CTSGP08311 255 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 EGR2P11161 476 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-215ENST00000617482 PSG9Q00887 426 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 UBE2V1Q13404 147 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 GATD1Q8NB37 220 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 OR8A1Q8NGG7 326 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 SIGLEC8Q9NYZ4 499 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 A0A087X0K7 114 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 ZNF80P51504 273 aaPredicted RBP9.2□□□□□ -0.94
C11orf54-215ENST00000617482 TM4SF20Q53R12 229 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 ZNF493Q6ZR52 646 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 PRELID3AQ96N28 172 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 PRR25Q96S07 402 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 THYN1Q9P016 225 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 SMAD5-AS1Q9Y6J3 95 aa9.2□□□□□ -0.94
C11orf54-215ENST00000617482 SMKR1H3BMG3 65 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 RPL7P18124 248 aaKnown RBP9.19□□□□□ -0.94
C11orf54-215ENST00000617482 ZFP36P26651 326 aaKnown RBP9.19□□□□□ -0.94
C11orf54-215ENST00000617482 ADORA2A-AS1P86434 159 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 FOXE3Q13461 319 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 TWIST1Q15672 202 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 BVES-AS1Q5T3Y7 98 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 FAM104BQ5XKR9 115 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 A0A096LNJ9 63 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 TCTAP57738 103 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 CCDC144NLQ6NUI1 221 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 TMEM190Q8WZ59 177 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 RABAC1Q9UI14 185 aa9.19□□□□□ -0.94
C11orf54-215ENST00000617482 VAMP3Q15836 100 aa9.18□□□□□ -0.94
C11orf54-215ENST00000617482 MRPL51Q4U2R6 128 aaKnown RBP9.18□□□□□ -0.94
C11orf54-215ENST00000617482 ORMDL3Q8N138 153 aa9.18□□□□□ -0.94
C11orf54-215ENST00000617482 MS4A6AQ9H2W1 248 aa9.18□□□□□ -0.94
C11orf54-215ENST00000617482 IGHV7-81A0A0B4J1V7 117 aa9.17□□□□□ -0.94
C11orf54-215ENST00000617482 NDUFS7O75251 213 aa9.17□□□□□ -0.94
C11orf54-215ENST00000617482 IGHG4P01861 327 aa9.17□□□□□ -0.94
C11orf54-215ENST00000617482 PPBPP02775 128 aa9.17□□□□□ -0.94
C11orf54-215ENST00000617482 C11orf71Q6IPW1 123 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms