RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 C7orf71A4D174 169 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 SP5Q6BEB4 398 aaPredicted RBP10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 SCGB1D4Q6XE38 83 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 TTC9CQ8N5M4 171 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 C18orf32Q8TCD1 76 aa10.42□□□□□ -0.74
PPP4R3B-206ENST00000616407 TMEM8BA6NDV4 472 aa10.41□□□□□ -0.74
PPP4R3B-206ENST00000616407 EVI2AP22794 236 aa10.41□□□□□ -0.74
PPP4R3B-206ENST00000616407 CHCHD1Q96BP2 118 aaKnown RBP10.41□□□□□ -0.74
PPP4R3B-206ENST00000616407 ARHGAP32A7KAX9 2087 aa10.41□□□□□ -0.74
PPP4R3B-206ENST00000616407 RNF151Q2KHN1 245 aa10.41□□□□□ -0.74
PPP4R3B-206ENST00000616407 DGAT2L7PQ6IED9 249 aa10.41□□□□□ -0.74
PPP4R3B-206ENST00000616407 TMEM75Q8N9X5 138 aa10.41□□□□□ -0.74
PPP4R3B-206ENST00000616407 TRAV21A0A0B4J279 112 aa10.41□□□□□ -0.74
PPP4R3B-206ENST00000616407 C1orf194Q5T5A4 169 aa10.41□□□□□ -0.74
PPP4R3B-206ENST00000616407 TEX29Q8N6K0 151 aa10.41□□□□□ -0.74
PPP4R3B-206ENST00000616407 H3BVH4 76 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 DTX2Q86UW9 622 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 USMG5Q96IX5 58 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 MRPL27Q9P0M9 148 aaKnown RBP10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 IGHV7-81A0A0B4J1V7 117 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 IGHV4-61A0A0C4DH41 118 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 FAM181BA6NEQ2 426 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 FAM223BA6NKX1 122 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 RNF223E7ERA6 249 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 F2Z2F3 143 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 C12orf54Q6X4T0 127 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 FAM223AQ8IWN6 122 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 AMN1Q8IY45 258 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 NPBQ8NG41 125 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 TRAV9-2A0A087WT02 112 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 OVOL3O00110 214 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 SLC25A16P16260 332 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 C9orf139Q6ZV77 190 aa10.4□□□□□ -0.74
PPP4R3B-206ENST00000616407 OVOL1O14753 267 aa10.4□□□□□ -0.75
PPP4R3B-206ENST00000616407 IGHV4-39P01824 125 aa10.4□□□□□ -0.75
PPP4R3B-206ENST00000616407 ZNF56Q15929 161 aa10.4□□□□□ -0.75
PPP4R3B-206ENST00000616407 CT83Q5H943 113 aa10.4□□□□□ -0.75
PPP4R3B-206ENST00000616407 ZNF502Q8TBZ5 544 aa10.4□□□□□ -0.75
PPP4R3B-206ENST00000616407 GFRA4Q9GZZ7 299 aa10.4□□□□□ -0.75
PPP4R3B-206ENST00000616407 GP9P14770 177 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 CDPF1Q6NVV7 123 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 LINC01356Q8N9X3 169 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 ZNF503Q96F45 646 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 ZC2HC1AQ96GY0 325 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 RHPN1-AS1Q9BWJ2 59 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 DSCAMO60469 2012 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 FXYD7P58549 80 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 LOC102724200A0A096LPH7 203 aaPredicted RBP10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 CENPVL3A0A0U1RRI6 287 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 C11orf44Q8N8P7 122 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 TMEM160Q9NX00 188 aa10.39□□□□□ -0.75
PPP4R3B-206ENST00000616407 IGKV1D-37A0A075B6S9 117 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 PPBPP02775 128 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 CD7P09564 240 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 LEPP41159 167 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 TMEM213A2RRL7 107 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 A8MWP6 167 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 PSMG4Q5JS54 123 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 FAM231BA6NCW3 169 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 A6NDN8 102 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 HBDP02042 147 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 HLA-DMBP28068 263 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 LCNL1Q6ZST4 164 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 PRR25Q96S07 402 aa10.38□□□□□ -0.75
PPP4R3B-206ENST00000616407 HIVEP3Q5T1R4 2406 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 IGLV11-55A0A075B6I3 123 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 A0A1W2PRX2 142 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 PSMB11A5LHX3 300 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 SMKR1H3BMG3 65 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 PAX1P15863 534 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 HERVK_113P61574 105 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 Q6ZWC4 215 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 RAX2Q96IS3 184 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 FOXC2Q99958 501 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 LTAP01374 205 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 CRYGCP07315 174 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 Q8N9W7 124 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 KIR2DL4Q99706 377 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 MCRIP2Q9BUT9 160 aaKnown RBP10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 SRSF9Q13242 221 aaKnown RBP eCLIP10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 ALKBH7Q9BT30 221 aaPredicted RBP10.37□□□□□ -0.75
PPP4R3B-206ENST00000616407 TCF21O43680 179 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 PLP1P60201 277 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 CACNG7P62955 275 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 PET117Q6UWS5 81 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 VGLL1Q99990 258 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 TANC2Q9HCD6 1990 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 FRMD6-AS1P0C7T7 363 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 CDSNQ15517 529 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 DNLZQ5SXM8 178 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 PEF1Q9UBV8 284 aaKnown RBP10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 POLR3KQ9Y2Y1 108 aaPredicted RBP10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 MYO18BQ8IUG5 2567 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 FCN3O75636 299 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 PRB1P04280 392 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 COA6Q5JTJ3 125 aaKnown RBP10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 LDLRAD2Q5SZI1 272 aa10.36□□□□□ -0.75
PPP4R3B-206ENST00000616407 SAMD13Q5VXD3 122 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms