RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 TRBV27A0A0K0K1C4 114 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 F6UZH7 168 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 H7C2G1 150 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 C19orf84I3L1E1 186 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 M0R129 80 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 NPFFO15130 113 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 TIMM17BO60830 172 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 TCL1BO95988 128 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 SLC25A5P05141 298 aaKnown RBP1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 TSPAN19P0C672 248 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 MYL5Q02045 173 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 HAGHLQ6PII5 290 aaPredicted RBP1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 GLIPR1L1Q6UWM5 242 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 LCN15Q6UWW0 184 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 PATE2Q6UY27 113 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 C7orf65Q6ZTY9 151 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 DEFB128Q7Z7B8 93 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 DYNAPQ8N1N2 210 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 OR5A2Q8NGI9 324 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 OR5D16Q8NGK9 328 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF418Q8TF45 676 aaPredicted RBP1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 PRELID3AQ96N28 172 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 BCL2L10Q9HD36 194 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 KIF21BO75037 1637 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 ABCC2Q92887 1545 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 KDM5BQ9UGL1 1544 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 FAM135BQ49AJ0 1406 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 TNS3Q68CZ2 1445 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 SMG6Q86US8 1419 aaKnown RBP1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 PRG4Q92954 1404 aaPredicted RBP1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 POLEQ07864 2286 aa1.4□□□□□ -2.19
SCAMP1-205ENST00000614488 ADAMTS7Q9UKP4 1686 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 KDM5CP41229 1560 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 ADAMTS12P58397 1594 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 IGKV1D-42A0A075B6H8 117 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 IGHV1-18A0A0C4DH31 117 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 A0A0D9SG52 128 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 TRBV10-2A0A0K0K1G8 114 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 LOC100130705A0A1B0GUX0 176 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 FAM92AA1XBS5 289 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 C9orf170A2RU37 121 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF727A8MUV8 499 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 A8MWV9 139 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF670-ZNF695F2Z2N8 137 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 IFNA4P05014 189 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF705BP0CI00 300 aaPredicted RBP1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 NFYAP23511 347 aaPredicted RBP1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 AKR1D1P51857 326 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 KLRD1Q13241 179 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 CDK5R1Q15078 307 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 CCSMST1Q4G0I0 132 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 OCIAD2Q56VL3 154 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 SCIMPQ6UWF3 145 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 MMGT1Q8N4V1 131 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 MORN4Q8NDC4 146 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 NAT14Q8WUY8 206 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 CHCHD1Q96BP2 118 aaKnown RBP1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 C14orf144Q96I85 54 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 TCEAL7Q9BRU2 100 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF471Q9BX82 626 aaPredicted RBP1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 FKBP11Q9NYL4 201 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 COMMD3Q9UBI1 195 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 HHLA3Q9XRX5 114 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 MADDQ8WXG6 1647 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 ABCA10Q8WWZ4 1543 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 CCDC88CQ9P219 2028 aa1.39□□□□□ -2.19
SCAMP1-205ENST00000614488 TCOF1Q13428 1488 aaKnown RBP1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 ZNF518AQ6AHZ1 1483 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 CDK12Q9NYV4 1490 aaPredicted RBP1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 RTL9Q8NET4 1388 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 SBF1O95248 1867 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 SPAARA0A1B0GVQ0 90 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 C7orf71A4D174 169 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 OR2T8A6NH00 312 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 SDCBPO00560 298 aaPredicted RBP1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 HBDP02042 147 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 CLPSP04118 112 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 TRGC1P0CF51 173 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 MGST1P10620 155 aaKnown RBP1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 FXYD2P54710 66 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 SNRPD3P62318 126 aaKnown RBP1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 QRFPP83859 136 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 NNATQ16517 81 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 RNASE10Q5GAN6 216 aaKnown RBP1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 Q6ZQT0 140 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 AAED1Q7RTV5 226 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 Q8IYB0 196 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 FAM216BQ8N7L0 139 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 MAGOHBQ96A72 148 aaKnown RBP1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 MRPS24Q96EL2 167 aaKnown RBP1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 RETNLBQ9BQ08 111 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 CXCL16Q9H2A7 254 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 COA4Q9NYJ1 87 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 ADGRB3O60242 1522 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 TOP2AP11388 1531 aaKnown RBP1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 ERICH3Q5RHP9 1530 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 DLC1Q96QB1 1528 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 FGD6Q6ZV73 1430 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 ATG2AQ2TAZ0 1938 aa1.38□□□□□ -2.19
SCAMP1-205ENST00000614488 MAGI2Q86UL8 1455 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms