RNA–Protein interactions for RNA: ENST00000614240.4

SMN2-213, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-213ENST00000614240 SCRT2Q9NQ03 307 aa12.38□□□□□ -0.43
SMN2-213ENST00000614240 RYR1P21817 5038 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 A0A1W2PPQ1 181 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 L7N2F9 121 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 VAMP2P63027 116 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 ARL16Q0P5N6 197 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 RAB31Q13636 194 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 OPCMLQ14982 345 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 Q6ZRG5 221 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 TMEM37Q8WXS4 190 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 UPK3BQ9BT76 320 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 SRRQ9GZT4 340 aa12.37□□□□□ -0.43
SMN2-213ENST00000614240 MRPS16Q9Y3D3 137 aaKnown RBP12.37□□□□□ -0.43
SMN2-213ENST00000614240 CENPXA8MT69 81 aa12.36□□□□□ -0.43
SMN2-213ENST00000614240 H3BNG1 76 aa12.36□□□□□ -0.43
SMN2-213ENST00000614240 CT45A10P0DMU9 189 aa12.36□□□□□ -0.43
SMN2-213ENST00000614240 BCAP31P51572 246 aa12.36□□□□□ -0.43
SMN2-213ENST00000614240 MORN5Q5VZ52 161 aa12.36□□□□□ -0.43
SMN2-213ENST00000614240 MGST2Q99735 147 aa12.36□□□□□ -0.43
SMN2-213ENST00000614240 TMPRSS5Q9H3S3 457 aa12.36□□□□□ -0.43
SMN2-213ENST00000614240 DNAJC4Q9NNZ3 241 aa12.36□□□□□ -0.43
SMN2-213ENST00000614240 ZNF586Q9NXT0 402 aa12.36□□□□□ -0.43
SMN2-213ENST00000614240 RCL1Q9Y2P8 373 aaKnown RBP12.36□□□□□ -0.43
SMN2-213ENST00000614240 DNAH11Q96DT5 4516 aa12.36□□□□□ -0.43
SMN2-213ENST00000614240 TRGV2A0A075B6R0 118 aa12.35□□□□□ -0.43
SMN2-213ENST00000614240 C7orf66A4D0T2 115 aa12.35□□□□□ -0.43
SMN2-213ENST00000614240 H3BQ15 152 aa12.35□□□□□ -0.43
SMN2-213ENST00000614240 MBPP02686 304 aaPredicted RBP12.35□□□□□ -0.43
SMN2-213ENST00000614240 IGLC2P0DOY2 106 aa12.35□□□□□ -0.43
SMN2-213ENST00000614240 CAMLGP49069 296 aa12.35□□□□□ -0.43
SMN2-213ENST00000614240 ZNF846Q147U1 533 aa12.35□□□□□ -0.43
SMN2-213ENST00000614240 GUK1Q16774 197 aa12.35□□□□□ -0.43
SMN2-213ENST00000614240 PYGO2Q9BRQ0 406 aa12.35□□□□□ -0.43
SMN2-213ENST00000614240 TRAV5A0A0B4J249 113 aa12.34□□□□□ -0.43
SMN2-213ENST00000614240 KRTAP10-2P60368 255 aa12.34□□□□□ -0.43
SMN2-213ENST00000614240 DAZ2Q13117 558 aaKnown RBP12.34□□□□□ -0.43
SMN2-213ENST00000614240 BAK1Q16611 211 aa12.34□□□□□ -0.43
SMN2-213ENST00000614240 Q6ZTI0 123 aa12.34□□□□□ -0.43
SMN2-213ENST00000614240 ZNF431Q8TF32 576 aaPredicted RBP12.34□□□□□ -0.43
SMN2-213ENST00000614240 SAT2Q96F10 170 aaPredicted RBP12.34□□□□□ -0.43
SMN2-213ENST00000614240 ODF3Q96PU9 254 aa12.34□□□□□ -0.43
SMN2-213ENST00000614240 NPIPB6E9PJ23 425 aa12.33□□□□□ -0.44
SMN2-213ENST00000614240 BTF3P20290 206 aaKnown RBP12.33□□□□□ -0.44
SMN2-213ENST00000614240 CAV2P51636 162 aa12.33□□□□□ -0.44
SMN2-213ENST00000614240 MIC13Q5XKP0 118 aa12.33□□□□□ -0.44
SMN2-213ENST00000614240 NRARPQ7Z6K4 114 aa12.33□□□□□ -0.44
SMN2-213ENST00000614240 OR1L4Q8NGR5 311 aa12.33□□□□□ -0.44
SMN2-213ENST00000614240 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.44
SMN2-213ENST00000614240 FAM25EA8MYX2 175 aa12.32□□□□□ -0.44
SMN2-213ENST00000614240 SLC25A5P05141 298 aaKnown RBP12.32□□□□□ -0.44
SMN2-213ENST00000614240 ZNF680Q8NEM1 530 aa12.32□□□□□ -0.44
SMN2-213ENST00000614240 MITD1Q8WV92 249 aa12.32□□□□□ -0.44
SMN2-213ENST00000614240 PFDN5Q99471 154 aa12.32□□□□□ -0.44
SMN2-213ENST00000614240 GSN-AS1Q9NRJ2 163 aa12.32□□□□□ -0.44
SMN2-213ENST00000614240 ABCA13Q86UQ4 5058 aa12.32□□□□□ -0.44
SMN2-213ENST00000614240 TRGV1A0A0A0MS02 117 aa12.31□□□□□ -0.44
SMN2-213ENST00000614240 C7orf71A4D174 169 aa12.31□□□□□ -0.44
SMN2-213ENST00000614240 CCSO14618 274 aa12.31□□□□□ -0.44
SMN2-213ENST00000614240 CST7O76096 145 aa12.31□□□□□ -0.44
SMN2-213ENST00000614240 ERCC8Q13216 396 aa12.31□□□□□ -0.44
SMN2-213ENST00000614240 C12orf45Q8N5I9 185 aaPredicted RBP12.31□□□□□ -0.44
SMN2-213ENST00000614240 DYNC1H1Q14204 4646 aaKnown RBP12.31□□□□□ -0.44
SMN2-213ENST00000614240 A0A096LPF7 62 aa12.3□□□□□ -0.44
SMN2-213ENST00000614240 LINC00315P59091 139 aa12.3□□□□□ -0.44
SMN2-213ENST00000614240 CNPY1Q3B7I2 92 aa12.3□□□□□ -0.44
SMN2-213ENST00000614240 VSIG2Q96IQ7 327 aa12.3□□□□□ -0.44
SMN2-213ENST00000614240 C20orf85Q9H1P6 137 aa12.3□□□□□ -0.44
SMN2-213ENST00000614240 UQCC1Q9NVA1 299 aa12.3□□□□□ -0.44
SMN2-213ENST00000614240 FUT9Q9Y231 359 aa12.3□□□□□ -0.44
SMN2-213ENST00000614240 TIMM9Q9Y5J7 89 aa12.3□□□□□ -0.44
SMN2-213ENST00000614240 C5orf51A6NDU8 294 aa12.29□□□□□ -0.44
SMN2-213ENST00000614240 EREGO14944 169 aa12.29□□□□□ -0.44
SMN2-213ENST00000614240 ZNF253O75346 499 aa12.29□□□□□ -0.44
SMN2-213ENST00000614240 RNASE4P34096 147 aaKnown RBP12.29□□□□□ -0.44
SMN2-213ENST00000614240 BTCP35070 178 aa12.29□□□□□ -0.44
SMN2-213ENST00000614240 SLC39A9Q9NUM3 307 aa12.29□□□□□ -0.44
SMN2-213ENST00000614240 TRBV19A0A075B6N1 114 aa12.28□□□□□ -0.44
SMN2-213ENST00000614240 FAM24AA6NFZ4 105 aa12.28□□□□□ -0.44
SMN2-213ENST00000614240 M0R3E3 92 aa12.28□□□□□ -0.44
SMN2-213ENST00000614240 SIVA1O15304 175 aa12.28□□□□□ -0.44
SMN2-213ENST00000614240 PVALBP20472 110 aaPredicted RBP12.28□□□□□ -0.44
SMN2-213ENST00000614240 BAXQ07812 192 aa12.28□□□□□ -0.44
SMN2-213ENST00000614240 EIF4E3Q8N5X7 224 aaKnown RBP12.28□□□□□ -0.44
SMN2-213ENST00000614240 MRPL53Q96EL3 112 aaKnown RBP12.28□□□□□ -0.44
SMN2-213ENST00000614240 LINC00477Q96M19 166 aa12.28□□□□□ -0.44
SMN2-213ENST00000614240 PTTG2Q9NZH5 202 aa12.28□□□□□ -0.44
SMN2-213ENST00000614240 PRELID1Q9Y255 219 aa12.28□□□□□ -0.44
SMN2-213ENST00000614240 WDR83OSQ9Y284 106 aa12.28□□□□□ -0.44
SMN2-213ENST00000614240 UBE2L5PA0A1B0GUS4 154 aa12.27□□□□□ -0.45
SMN2-213ENST00000614240 RGS13O14921 159 aa12.27□□□□□ -0.45
SMN2-213ENST00000614240 PAX4O43316 350 aa12.27□□□□□ -0.45
SMN2-213ENST00000614240 GPX1P07203 203 aa12.27□□□□□ -0.45
SMN2-213ENST00000614240 RPL29P47914 159 aaKnown RBP12.27□□□□□ -0.45
SMN2-213ENST00000614240 CD300CQ08708 224 aa12.27□□□□□ -0.45
SMN2-213ENST00000614240 BTN1A1Q13410 526 aa12.27□□□□□ -0.45
SMN2-213ENST00000614240 C11orf72Q8NBR9 251 aa12.27□□□□□ -0.45
SMN2-213ENST00000614240 C18orf15Q96N68 181 aa12.27□□□□□ -0.45
SMN2-213ENST00000614240 ICOSQ9Y6W8 199 aa12.27□□□□□ -0.45
SMN2-213ENST00000614240 MPDU1O75352 247 aa12.26□□□□□ -0.45
SMN2-213ENST00000614240 NXPH4O95158 308 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms