RNA–Protein interactions for RNA: ENST00000613214.4

TNXB-209, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-209ENST00000613214 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 M0R1W7 72 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST1H2BKO60814 126 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST1H2BJP06899 126 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST1H2BOP23527 126 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST1H2BBP33778 126 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST1H2BDP58876 126 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST1H2BCP62807 126 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST2H2BEQ16778 126 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST1H2BHQ93079 126 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 TIMM17AQ99595 171 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST1H2BNQ99877 126 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 HIST1H2BMQ99879 126 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 C9orf139Q6ZV77 190 aa12.49□□□□□ -0.41
TNXB-209ENST00000613214 XCL1P47992 114 aa12.48□□□□□ -0.41
TNXB-209ENST00000613214 NRGNQ92686 78 aa12.48□□□□□ -0.41
TNXB-209ENST00000613214 SPINK8P0C7L1 97 aa12.48□□□□□ -0.41
TNXB-209ENST00000613214 GAGE2BQ13066 116 aa12.48□□□□□ -0.41
TNXB-209ENST00000613214 NDUFB8O95169 186 aa12.48□□□□□ -0.41
TNXB-209ENST00000613214 COL24A1Q17RW2 1714 aa12.48□□□□□ -0.41
TNXB-209ENST00000613214 TNFRSF14Q92956 283 aa12.48□□□□□ -0.41
TNXB-209ENST00000613214 SPTBN1Q01082 2364 aaKnown RBP12.48□□□□□ -0.41
TNXB-209ENST00000613214 CRYGSP22914 178 aa12.48□□□□□ -0.41
TNXB-209ENST00000613214 DYSFO75923 2080 aa12.48□□□□□ -0.41
TNXB-209ENST00000613214 TRGV9Q99603 122 aa12.48□□□□□ -0.41
TNXB-209ENST00000613214 A0A087WWC5 75 aa12.47□□□□□ -0.41
TNXB-209ENST00000613214 BTCP35070 178 aa12.47□□□□□ -0.41
TNXB-209ENST00000613214 LY6G6FQ5SQ64 297 aa12.47□□□□□ -0.41
TNXB-209ENST00000613214 CARHSP1Q9Y2V2 147 aaKnown RBP12.47□□□□□ -0.41
TNXB-209ENST00000613214 HSD52Q0P140 79 aa12.47□□□□□ -0.41
TNXB-209ENST00000613214 NOP10Q9NPE3 64 aaKnown RBP12.47□□□□□ -0.41
TNXB-209ENST00000613214 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.47□□□□□ -0.41
TNXB-209ENST00000613214 APOC4P55056 127 aa12.47□□□□□ -0.41
TNXB-209ENST00000613214 HS3ST6Q96QI5 342 aa12.47□□□□□ -0.41
TNXB-209ENST00000613214 WDR83OSQ9Y284 106 aa12.46□□□□□ -0.41
TNXB-209ENST00000613214 MMP23AO75900 390 aa12.46□□□□□ -0.41
TNXB-209ENST00000613214 SUPT4H1P63272 117 aaKnown RBP12.46□□□□□ -0.41
TNXB-209ENST00000613214 ARTNQ5T4W7 220 aa12.46□□□□□ -0.41
TNXB-209ENST00000613214 IGHV1-69DA0A0B4J2H0 117 aa12.46□□□□□ -0.42
TNXB-209ENST00000613214 IGHV1-69P01742 117 aa12.46□□□□□ -0.42
TNXB-209ENST00000613214 THSD7AQ9UPZ6 1657 aa12.46□□□□□ -0.42
TNXB-209ENST00000613214 APRG1Q8IVJ8 170 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 CACNA1BQ00975 2339 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 CACNA1EQ15878 2313 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 IFI6P09912 130 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 ZC2HC1BQ5TFG8 222 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 IGLV10-54A0A075B6I4 117 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 IGHV3-30P01768 117 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 IGHV3-33P01772 117 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 IGHV3-30-3P0DP02 117 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 IGHV3-30-5P0DP03 117 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 KMT2EQ8IZD2 1858 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 LY6G5BQ8NDX9 201 aa12.45□□□□□ -0.42
TNXB-209ENST00000613214 TRAV9-1A0A075B6T8 112 aa12.44□□□□□ -0.42
TNXB-209ENST00000613214 DOCK11Q5JSL3 2073 aa12.44□□□□□ -0.42
TNXB-209ENST00000613214 PTPRDP23468 1912 aa12.44□□□□□ -0.42
TNXB-209ENST00000613214 A0A1B0GUS0 222 aa12.44□□□□□ -0.42
TNXB-209ENST00000613214 ZNF362Q5T0B9 420 aaPredicted RBP12.44□□□□□ -0.42
TNXB-209ENST00000613214 TRPT1Q86TN4 253 aaKnown RBP12.44□□□□□ -0.42
TNXB-209ENST00000613214 SCN10AQ9Y5Y9 1956 aa12.44□□□□□ -0.42
TNXB-209ENST00000613214 LYPD3O95274 346 aa12.44□□□□□ -0.42
TNXB-209ENST00000613214 IGHG3P01860 377 aa12.44□□□□□ -0.42
TNXB-209ENST00000613214 A0A0G2JRQ6 117 aa12.44□□□□□ -0.42
TNXB-209ENST00000613214 A0A1W2PPI3 338 aa12.44□□□□□ -0.42
TNXB-209ENST00000613214 DEFB4AO15263 64 aa12.44□□□□□ -0.42
TNXB-209ENST00000613214 NDUFS7O75251 213 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 CRLF1O75462 422 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 CHAC1Q9BUX1 264 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 TPSG1Q9NRR2 321 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 KIR3DS1Q14943 382 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 NACAE9PAV3 2078 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 CRYGCP07315 174 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 ID3Q02535 119 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 Q6P435 159 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 LCTP09848 1927 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 HLA-DRB4P13762 266 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 HLA-DRB4X5D2U9 266 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 HIST1H2BLQ99880 126 aa12.43□□□□□ -0.42
TNXB-209ENST00000613214 F6UB75 175 aa12.42□□□□□ -0.42
TNXB-209ENST00000613214 DIAPH2-AS1Q14236 149 aa12.42□□□□□ -0.42
TNXB-209ENST00000613214 GREB1LQ9C091 1923 aaPredicted RBP12.42□□□□□ -0.42
TNXB-209ENST00000613214 DNAJC30Q96LL9 226 aa12.42□□□□□ -0.42
TNXB-209ENST00000613214 TMEM243Q9BU79 118 aa12.42□□□□□ -0.42
TNXB-209ENST00000613214 MPV17L2Q567V2 206 aa12.42□□□□□ -0.42
TNXB-209ENST00000613214 K7ENP7 123 aa12.42□□□□□ -0.42
TNXB-209ENST00000613214 NRXN2Q9P2S2 1712 aa12.41□□□□□ -0.42
TNXB-209ENST00000613214 C5orf47Q569G3 176 aa12.41□□□□□ -0.42
TNXB-209ENST00000613214 SMIM2Q9BVW6 85 aa12.41□□□□□ -0.42
TNXB-209ENST00000613214 SEC11AP67812 179 aa12.41□□□□□ -0.42
TNXB-209ENST00000613214 SPTA1P02549 2419 aa12.41□□□□□ -0.42
TNXB-209ENST00000613214 RNASE2P10153 161 aaKnown RBP12.41□□□□□ -0.42
TNXB-209ENST00000613214 C8orf86Q6ZUL3 223 aa12.41□□□□□ -0.42
TNXB-209ENST00000613214 AMBPP02760 352 aa12.4□□□□□ -0.42
TNXB-209ENST00000613214 GRNP28799 593 aaKnown RBP12.4□□□□□ -0.42
TNXB-209ENST00000613214 TICRRQ7Z2Z1 1910 aa12.4□□□□□ -0.42
TNXB-209ENST00000613214 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.4□□□□□ -0.42
TNXB-209ENST00000613214 PNRC2Q9NPJ4 139 aaKnown RBP12.4□□□□□ -0.42
TNXB-209ENST00000613214 GAS1P54826 345 aa12.4□□□□□ -0.42
TNXB-209ENST00000613214 LINC01551Q86U37 167 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms