RNA–Protein interactions for RNA: ENST00000611614.4

COPS7B-223, Transcript of COP9 signalosome subunit 7B, human

TSL 3 BASIC

Gene COPS7B, Length 2,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-223	ENST00000611614	ASPHD1	Q5U4P2	390 aa		10.9	□□□□□ -0.66
COPS7B-223	ENST00000611614	DYNAP	Q8N1N2	210 aa		10.9	□□□□□ -0.66
COPS7B-223	ENST00000611614	MLST8	Q9BVC4	326 aa		10.9	□□□□□ -0.66
COPS7B-223	ENST00000611614	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	10.9	□□□□□ -0.66
COPS7B-223	ENST00000611614	PRSS22	Q9GZN4	317 aa		10.9	□□□□□ -0.66
COPS7B-223	ENST00000611614	FBN2	P35556	2912 aa		10.9	□□□□□ -0.66
COPS7B-223	ENST00000611614	IGHV3OR16-10	A0A075B7F0	116 aa		10.9	□□□□□ -0.67
COPS7B-223	ENST00000611614	TGFA	P01135	160 aa		10.9	□□□□□ -0.67
COPS7B-223	ENST00000611614	IGKV1-17	P01599	117 aa		10.9	□□□□□ -0.67
COPS7B-223	ENST00000611614	CAMP	P49913	170 aa		10.9	□□□□□ -0.67
COPS7B-223	ENST00000611614		Q96MF0	132 aa		10.9	□□□□□ -0.67
COPS7B-223	ENST00000611614		H3BTX0	84 aa		10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	TCRA	P04437	139 aa		10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	UNQ5815/PRO19632	Q6UWF5	114 aa		10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	PIP4P2	Q8N4L2	257 aa		10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	OTOR	Q9NRC9	128 aa		10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	RPS20	P60866	119 aa	Known RBP	10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	SAPCD1	Q5SSQ6	148 aa		10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	FAM120AOS	Q5T036	256 aa		10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	MAPK1IP1L	Q8NDC0	245 aa		10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	URB1-AS1	Q96HZ7	61 aa		10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	SGK494	Q96LW2	274 aa		10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.89	□□□□□ -0.67
COPS7B-223	ENST00000611614		A0A096LNT2	108 aa		10.88	□□□□□ -0.67
COPS7B-223	ENST00000611614	C19orf71	A6NCJ1	209 aa		10.88	□□□□□ -0.67
COPS7B-223	ENST00000611614	OR4C46	A6NHA9	309 aa		10.88	□□□□□ -0.67
COPS7B-223	ENST00000611614		J3QLI3	93 aa		10.88	□□□□□ -0.67
COPS7B-223	ENST00000611614	LTA	P01374	205 aa		10.88	□□□□□ -0.67
COPS7B-223	ENST00000611614		P01737	135 aa		10.88	□□□□□ -0.67
COPS7B-223	ENST00000611614	C5orf64	Q2M2E5	130 aa		10.88	□□□□□ -0.67
COPS7B-223	ENST00000611614	RBPMS2	Q6ZRY4	209 aa	Known RBP	10.88	□□□□□ -0.67
COPS7B-223	ENST00000611614	TMEM191A	Q9H0A3	160 aa		10.88	□□□□□ -0.67
COPS7B-223	ENST00000611614	SYS1-DBNDD2	H3BUS1	97 aa		10.87	□□□□□ -0.67
COPS7B-223	ENST00000611614	BMI1	P35226	326 aa		10.87	□□□□□ -0.67
COPS7B-223	ENST00000611614	EBI3	Q14213	229 aa		10.87	□□□□□ -0.67
COPS7B-223	ENST00000611614	FBLN7	Q53RD9	439 aa		10.87	□□□□□ -0.67
COPS7B-223	ENST00000611614	BRD3OS	Q6XYD6	125 aa		10.87	□□□□□ -0.67
COPS7B-223	ENST00000611614	NDFIP1	Q9BT67	221 aa		10.87	□□□□□ -0.67
COPS7B-223	ENST00000611614	SHANK2-AS3	Q9BTD1	123 aa		10.87	□□□□□ -0.67
COPS7B-223	ENST00000611614	ABCA2	Q9BZC7	2435 aa		10.87	□□□□□ -0.67
COPS7B-223	ENST00000611614	TRAV30	A0A087WSZ9	112 aa		10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	PET117	Q6UWS5	81 aa		10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	TCF24	Q7RTU0	167 aa		10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	DAZAP1	Q96EP5	407 aa	Known RBP	10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	CLEC5A	Q9NY25	188 aa		10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	MAP1A	P78559	2803 aa	Predicted RBP	10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	IGHV1-24	A0A0C4DH33	117 aa		10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	LEPROTL1	O95214	131 aa		10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	IGHV4-38-2	P0DP08	117 aa		10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	MS4A6A	Q9H2W1	248 aa		10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	RNF24	Q9Y225	148 aa		10.86	□□□□□ -0.67
COPS7B-223	ENST00000611614	NPIPB5	A8MRT5	1133 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614		H3BRN7	92 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	HLA-DRB1	P01911	266 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	SLC25A34	Q6PIV7	304 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	ZNF562	Q6V9R5	426 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	AJUBA	Q96IF1	538 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	TRBV6-1	A0A0K0K1D8	114 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	NPIPB6	E9PJ23	425 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	RBX1	P62877	108 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	KLF17	Q5JT82	389 aa	Predicted RBP	10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	SPATA12	Q7Z6I5	190 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	BPIFA4P	Q86YQ2	179 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	ZNF491	Q8N8L2	437 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	HSPB8	Q9UJY1	196 aa		10.85	□□□□□ -0.67
COPS7B-223	ENST00000611614	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	10.85	□□□□□ -0.67	3e-6	■■■□□ 14.6
COPS7B-223	ENST00000611614	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	HAX1	O00165	279 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	IGHV4-31	P0DP07	118 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	CDKN1B	P46527	198 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	C12orf54	Q6X4T0	127 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614		Q8N6K4	173 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	OR4C5	Q8NGB2	326 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	ARPC1A	Q92747	370 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	RNF125	Q96EQ8	232 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	MAP1LC3C	Q9BXW4	147 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	IGLV11-55	A0A075B6I3	123 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	CHEK1	O14757	476 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	RHOG	P84095	191 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614		Q86TA4	180 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	EXOC3-AS1	Q8N2X6	119 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	TTC9C	Q8N5M4	171 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	RNASE8	Q8TDE3	154 aa	Known RBP	10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	GTSF1	Q8WW33	167 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	PGLYRP4	Q96LB8	373 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	FANCD2OS	Q96PS1	177 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	APC	P25054	2843 aa		10.84	□□□□□ -0.67
COPS7B-223	ENST00000611614	TRBV19	A0A075B6N1	114 aa		10.83	□□□□□ -0.68
COPS7B-223	ENST00000611614	IL4	P05112	153 aa		10.83	□□□□□ -0.68
COPS7B-223	ENST00000611614	MFAP4	P55083	255 aa		10.83	□□□□□ -0.68
COPS7B-223	ENST00000611614	ZNF48	Q96MX3	618 aa	Predicted RBP	10.83	□□□□□ -0.68
COPS7B-223	ENST00000611614	MEGF9	Q9H1U4	602 aa		10.83	□□□□□ -0.68
COPS7B-223	ENST00000611614	GNG7	O60262	68 aa		10.83	□□□□□ -0.68
COPS7B-223	ENST00000611614	GOLT1A	Q6ZVE7	132 aa		10.83	□□□□□ -0.68
COPS7B-223	ENST00000611614	PMCHL2	Q9BQD1	86 aa		10.83	□□□□□ -0.68
COPS7B-223	ENST00000611614	CREBBP	Q92793	2442 aa		10.83	□□□□□ -0.68
COPS7B-223	ENST00000611614	IGLV2-11	P01706	119 aa		10.82	□□□□□ -0.68
COPS7B-223	ENST00000611614	FOXA3	P55318	350 aa	Predicted RBP	10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms