RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 IGKV1OR2-108A0A075B7D4 117 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 TRAV40A0A0B4J280 105 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 SMAGPQ0VAQ4 97 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 PSG3Q16557 428 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 ZNF295-AS1Q8N0V1 137 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 CYSLTR1Q9Y271 337 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 PKD1L2Q7Z442 2459 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 GAGE12BA1L429 117 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 SPRY2O43597 315 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 PROP1O75360 226 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 DPM2O94777 84 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 KLRB1Q12918 225 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 LINC00173Q6ZV60 143 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 COX11Q9Y6N1 276 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 A0A0G2JLM5 398 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 A0A1B0GW15 77 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 THBDP07204 575 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 MSMPQ1L6U9 139 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 TMEM249Q2WGJ8 235 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 CENPVQ7Z7K6 275 aaPredicted RBP11.1□□□□□ -0.63
MUC1-223ENST00000611571 TMEM158Q8WZ71 300 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 DUX5Q96PT3 197 aa11.1□□□□□ -0.63
MUC1-223ENST00000611571 IGLV1-44P01699 117 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 C14orf178Q8N769 122 aaPredicted RBP11.09□□□□□ -0.63
MUC1-223ENST00000611571 G3V318 75 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 E7EUB6 86 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 FXYD5Q96DB9 178 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 RITA1Q96K30 269 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 IGKCP01834 107 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 UCNP55089 124 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 TMEM155Q4W5P6 130 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 SAMD5Q5TGI4 173 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 C11orf1Q9H5F2 150 aa11.09□□□□□ -0.63
MUC1-223ENST00000611571 EML5Q05BV3 1969 aa11.08□□□□□ -0.64
MUC1-223ENST00000611571 IGHV1-24A0A0C4DH33 117 aa11.08□□□□□ -0.64
MUC1-223ENST00000611571 NDUFB8O95169 186 aa11.08□□□□□ -0.64
MUC1-223ENST00000611571 C11orf52Q96A22 123 aa11.08□□□□□ -0.64
MUC1-223ENST00000611571 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
MUC1-223ENST00000611571 HLA-DMBP28068 263 aa11.08□□□□□ -0.64
MUC1-223ENST00000611571 NEU4Q8WWR8 484 aaPredicted RBP11.08□□□□□ -0.64
MUC1-223ENST00000611571 HCFC1P51610 2035 aa11.08□□□□□ -0.64
MUC1-223ENST00000611571 KIR3DS1Q14943 382 aa11.08□□□□□ -0.64
MUC1-223ENST00000611571 KRTAP27-1Q3LI81 207 aa11.08□□□□□ -0.64
MUC1-223ENST00000611571 ZC2HC1AQ96GY0 325 aa11.08□□□□□ -0.64
MUC1-223ENST00000611571 KMT2EQ8IZD2 1858 aa11.07□□□□□ -0.64
MUC1-223ENST00000611571 BRWD1-AS2P59051 145 aa11.07□□□□□ -0.64
MUC1-223ENST00000611571 COA6Q5JTJ3 125 aaKnown RBP11.07□□□□□ -0.64
MUC1-223ENST00000611571 RASL11AQ6T310 242 aa11.07□□□□□ -0.64
MUC1-223ENST00000611571 KIAA1549Q9HCM3 1950 aa11.07□□□□□ -0.64
MUC1-223ENST00000611571 PAX8Q06710 450 aa11.07□□□□□ -0.64
MUC1-223ENST00000611571 SYT8Q8NBV8 401 aa11.07□□□□□ -0.64
MUC1-223ENST00000611571 TNFRSF14Q92956 283 aa11.07□□□□□ -0.64
MUC1-223ENST00000611571 ZNF479Q96JC4 524 aa11.07□□□□□ -0.64
MUC1-223ENST00000611571 SHANK2-AS3Q9BTD1 123 aa11.07□□□□□ -0.64
MUC1-223ENST00000611571 DKK4Q9UBT3 224 aa11.07□□□□□ -0.64
MUC1-223ENST00000611571 IGHV3-73A0A0B4J1V6 119 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 ZNF815PA8K554 130 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 GEMIN7Q9H840 131 aaKnown RBP11.06□□□□□ -0.64
MUC1-223ENST00000611571 MRPL36Q9P0J6 103 aaKnown RBP11.06□□□□□ -0.64
MUC1-223ENST00000611571 CDH23Q9H251 3354 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 ZNF688P0C7X2 276 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 SNRPD3P62318 126 aaKnown RBP11.06□□□□□ -0.64
MUC1-223ENST00000611571 SRSF1Q07955 248 aaKnown RBP eCLIP11.06□□□□□ -0.64
MUC1-223ENST00000611571 TEX43Q6ZNM6 134 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 CTSZQ9UBR2 303 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 NDUFS7O75251 213 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 ZNF833PQ6ZTB9 187 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 MS4A6AQ9H2W1 248 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 TRAV26-2A0A0B4J265 109 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 FAM231BA6NCW3 169 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 OR4X2Q8NGF9 303 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 PIMREGQ9BSJ6 248 aa11.06□□□□□ -0.64
MUC1-223ENST00000611571 FNDC10F2Z333 226 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 PPBPP02775 128 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 GRNP28799 593 aaKnown RBP11.05□□□□□ -0.64
MUC1-223ENST00000611571 HSD52Q0P140 79 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 NUP37Q8NFH4 326 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 TRBV19A0A075B6N1 114 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 NPIPB6E9PJ23 425 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 ITGB1BP1O14713 200 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 GATA4P43694 442 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 SEC11AP67812 179 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 PATE2Q6UY27 113 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 SUMO2P61956 95 aaKnown RBP11.05□□□□□ -0.64
MUC1-223ENST00000611571 SLC50A1Q9BRV3 221 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 GTSF1LQ9H1H1 148 aa11.05□□□□□ -0.64
MUC1-223ENST00000611571 MRPS16Q9Y3D3 137 aaKnown RBP11.05□□□□□ -0.64
MUC1-223ENST00000611571 ITLN2Q8WWU7 325 aaPredicted RBP11.04□□□□□ -0.64
MUC1-223ENST00000611571 IGLC1P0CG04 106 aa11.04□□□□□ -0.64
MUC1-223ENST00000611571 CCL19Q99731 98 aa11.04□□□□□ -0.64
MUC1-223ENST00000611571 COX6CP09669 75 aa11.04□□□□□ -0.64
MUC1-223ENST00000611571 NPC2P61916 151 aa11.04□□□□□ -0.64
MUC1-223ENST00000611571 SIGLEC15Q6ZMC9 328 aa11.04□□□□□ -0.64
MUC1-223ENST00000611571 BPESC1Q9GZL8 116 aa11.04□□□□□ -0.64
MUC1-223ENST00000611571 POLQO75417 2590 aa11.03□□□□□ -0.64
MUC1-223ENST00000611571 A0A087WWL8 130 aa11.03□□□□□ -0.64
MUC1-223ENST00000611571 A0A1W2PRX2 142 aa11.03□□□□□ -0.64
MUC1-223ENST00000611571 FCN3O75636 299 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms