RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 PSMB11A5LHX3 300 aa11.72□□□□□ -0.53
VPS36-207ENST00000611132 CD59P13987 128 aa11.72□□□□□ -0.53
VPS36-207ENST00000611132 DDB2Q92466 427 aa11.72□□□□□ -0.53
VPS36-207ENST00000611132 TRAV21A0A0B4J279 112 aa11.72□□□□□ -0.53
VPS36-207ENST00000611132 BUB1B-PAK6H3BSN5 160 aa11.72□□□□□ -0.53
VPS36-207ENST00000611132 IGFL4Q6B9Z1 124 aa11.72□□□□□ -0.53
VPS36-207ENST00000611132 EML5Q05BV3 1969 aa11.72□□□□□ -0.53
VPS36-207ENST00000611132 TRGV3P03979 118 aa11.72□□□□□ -0.53
VPS36-207ENST00000611132 F8W1H4 67 aa11.72□□□□□ -0.53
VPS36-207ENST00000611132 SAP30O75446 220 aa11.72□□□□□ -0.53
VPS36-207ENST00000611132 IGKV1OR2-108A0A075B7D4 117 aa11.71□□□□□ -0.53
VPS36-207ENST00000611132 TPSG1Q9NRR2 321 aa11.71□□□□□ -0.53
VPS36-207ENST00000611132 C2orf70A6NJV1 201 aa11.71□□□□□ -0.53
VPS36-207ENST00000611132 BRWD1-AS2P59051 145 aa11.71□□□□□ -0.53
VPS36-207ENST00000611132 CIRBPQ14011 172 aaKnown RBP11.71□□□□□ -0.53
VPS36-207ENST00000611132 NUP37Q8NFH4 326 aa11.71□□□□□ -0.53
VPS36-207ENST00000611132 SRSF8Q9BRL6 282 aaKnown RBP11.71□□□□□ -0.53
VPS36-207ENST00000611132 NPYP01303 97 aa11.71□□□□□ -0.54
VPS36-207ENST00000611132 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.54
VPS36-207ENST00000611132 CTRLP40313 264 aa11.71□□□□□ -0.54
VPS36-207ENST00000611132 ADIPOQQ15848 244 aa11.71□□□□□ -0.54
VPS36-207ENST00000611132 PATE2Q6UY27 113 aa11.7□□□□□ -0.54
VPS36-207ENST00000611132 NDUFB8O95169 186 aa11.7□□□□□ -0.54
VPS36-207ENST00000611132 SPINK8P0C7L1 97 aa11.7□□□□□ -0.54
VPS36-207ENST00000611132 ANKRD39Q53RE8 183 aa11.7□□□□□ -0.54
VPS36-207ENST00000611132 IGLC1P0CG04 106 aa11.7□□□□□ -0.54
VPS36-207ENST00000611132 PAX1P15863 534 aa11.7□□□□□ -0.54
VPS36-207ENST00000611132 CNTFRP26992 372 aa11.7□□□□□ -0.54
VPS36-207ENST00000611132 C5orf64Q2M2E5 130 aa11.7□□□□□ -0.54
VPS36-207ENST00000611132 VGLL1Q99990 258 aa11.7□□□□□ -0.54
VPS36-207ENST00000611132 GEMIN7Q9H840 131 aaKnown RBP11.7□□□□□ -0.54
VPS36-207ENST00000611132 FAM106AQ4KMX7 169 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 FAM120AOSQ5T036 256 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 ZFAND6Q6FIF0 208 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 NUP210LQ5VU65 1888 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 GAGE12HA6NDE8 117 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 LINC01549A6NIU2 74 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 NDUFS7O75251 213 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 LINC00311Q8N616 119 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 DKK2Q9UBU2 259 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 MUC22E2RYF6 1773 aaPredicted RBP11.69□□□□□ -0.54
VPS36-207ENST00000611132 CEACAM4O75871 244 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 AZU1P20160 251 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 TMEM155Q4W5P6 130 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 PCP2Q8IVA1 136 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 GAGE2BQ13066 116 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 GAGE2EQ4V326 116 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 PRR25Q96S07 402 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 GAGE2DQ9UEU5 116 aa11.69□□□□□ -0.54
VPS36-207ENST00000611132 COLQQ9Y215 455 aaPredicted RBP11.69□□□□□ -0.54
VPS36-207ENST00000611132 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.68□□□□□ -0.54
VPS36-207ENST00000611132 CACNA1BQ00975 2339 aa11.68□□□□□ -0.54
VPS36-207ENST00000611132 PRR14LQ5THK1 2151 aa11.68□□□□□ -0.54
VPS36-207ENST00000611132 GTSF1Q8WW33 167 aa11.68□□□□□ -0.54
VPS36-207ENST00000611132 DIAPH2-AS1Q14236 149 aa11.68□□□□□ -0.54
VPS36-207ENST00000611132 C15orf32Q32M92 178 aa11.68□□□□□ -0.54
VPS36-207ENST00000611132 Q8N8P6 123 aa11.68□□□□□ -0.54
VPS36-207ENST00000611132 IGLV3-9A0A075B6K5 115 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 TRAV2A0A0B4J234 112 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 K7ERJ3 54 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 K7EM74 188 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 IGKV3-20P01619 116 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 ZNF503Q96F45 646 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 ERG28Q9UKR5 140 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 H3BRN7 92 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 LCNL1Q6ZST4 164 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 PROP1O75360 226 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 IGLV2-8P01709 118 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 TEX36Q5VZQ5 186 aa11.67□□□□□ -0.54
VPS36-207ENST00000611132 H3BMG7 143 aa11.66□□□□□ -0.54
VPS36-207ENST00000611132 IGHV4-39P01824 125 aa11.66□□□□□ -0.54
VPS36-207ENST00000611132 GLMPQ8WWB7 406 aa11.66□□□□□ -0.54
VPS36-207ENST00000611132 CEND1Q8N111 149 aa11.66□□□□□ -0.54
VPS36-207ENST00000611132 MRPL35Q9NZE8 188 aaKnown RBP11.66□□□□□ -0.54
VPS36-207ENST00000611132 KLF12Q9Y4X4 402 aa11.66□□□□□ -0.54
VPS36-207ENST00000611132 RBX1P62877 108 aa11.66□□□□□ -0.54
VPS36-207ENST00000611132 ERCC8Q13216 396 aa11.66□□□□□ -0.54
VPS36-207ENST00000611132 DPH3P1Q9H4G8 78 aa11.66□□□□□ -0.54
VPS36-207ENST00000611132 TSPAN13O95857 204 aa11.66□□□□□ -0.54
VPS36-207ENST00000611132 ARFGEF3Q5TH69 2177 aa11.65□□□□□ -0.54
VPS36-207ENST00000611132 TEX48A0A1B0GUV7 120 aa11.65□□□□□ -0.54
VPS36-207ENST00000611132 GP9P14770 177 aa11.65□□□□□ -0.54
VPS36-207ENST00000611132 PRTN3P24158 256 aa11.65□□□□□ -0.54
VPS36-207ENST00000611132 COPS9Q8WXC6 57 aa11.65□□□□□ -0.54
VPS36-207ENST00000611132 ATP6V0BQ99437 205 aa11.65□□□□□ -0.54
VPS36-207ENST00000611132 NEU4Q8WWR8 484 aaPredicted RBP11.65□□□□□ -0.54
VPS36-207ENST00000611132 TAL2Q16559 108 aa11.65□□□□□ -0.54
VPS36-207ENST00000611132 C10orf126Q8N4M7 172 aa11.65□□□□□ -0.54
VPS36-207ENST00000611132 PCNX2A6NKB5 2137 aa11.64□□□□□ -0.55
VPS36-207ENST00000611132 LOXP28300 417 aaPredicted RBP11.64□□□□□ -0.55
VPS36-207ENST00000611132 LY6EQ16553 131 aa11.64□□□□□ -0.55
VPS36-207ENST00000611132 SIGLEC15Q6ZMC9 328 aa11.64□□□□□ -0.55
VPS36-207ENST00000611132 MRAP2Q96G30 205 aa11.64□□□□□ -0.55
VPS36-207ENST00000611132 CD7P09564 240 aa11.64□□□□□ -0.55
VPS36-207ENST00000611132 SNRPD3P62318 126 aaKnown RBP11.64□□□□□ -0.55
VPS36-207ENST00000611132 AMTNQ6UX39 209 aa11.64□□□□□ -0.55
VPS36-207ENST00000611132 C17orf77Q96MU5 243 aa11.64□□□□□ -0.55
VPS36-207ENST00000611132 OVOL1O14753 267 aa11.64□□□□□ -0.55
VPS36-207ENST00000611132 C3orf36Q3SXR2 165 aa11.64□□□□□ -0.55
VPS36-207ENST00000611132 ZNF672Q499Z4 452 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms