RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 HSPB11Q9Y547 144 aa13.79□□□□□ -0.2
TCF3-219ENST00000610756 ALG5Q9Y673 324 aa13.79□□□□□ -0.2
TCF3-219ENST00000610756 TRAV12-2A0A075B6T6 113 aa13.78□□□□□ -0.2
TCF3-219ENST00000610756 DEFB131BA0A096LNP1 70 aa13.78□□□□□ -0.2
TCF3-219ENST00000610756 PRAC2D3DTV9 90 aa13.78□□□□□ -0.2
TCF3-219ENST00000610756 C17orf112F2Z3M2 114 aa13.78□□□□□ -0.2
TCF3-219ENST00000610756 CDKN1BP46527 198 aa13.78□□□□□ -0.2
TCF3-219ENST00000610756 BAP18Q8IXM2 172 aa13.78□□□□□ -0.2
TCF3-219ENST00000610756 PRB4P10163 310 aaPredicted RBP13.77□□□□□ -0.21
TCF3-219ENST00000610756 PDE6HQ13956 83 aa13.77□□□□□ -0.21
TCF3-219ENST00000610756 FAM222AQ5U5X8 452 aa13.77□□□□□ -0.21
TCF3-219ENST00000610756 TMEM256Q8N2U0 113 aa13.77□□□□□ -0.21
TCF3-219ENST00000610756 YTHDF2Q9Y5A9 579 aaKnown RBP13.77□□□□□ -0.21
TCF3-219ENST00000610756 NDUFB4O95168 129 aa13.76□□□□□ -0.21
TCF3-219ENST00000610756 TSPOP30536 169 aa13.76□□□□□ -0.21
TCF3-219ENST00000610756 OXA1LQ15070 435 aa13.76□□□□□ -0.21
TCF3-219ENST00000610756 RPP25LQ8N5L8 163 aaKnown RBP13.76□□□□□ -0.21
TCF3-219ENST00000610756 MRPL53Q96EL3 112 aaKnown RBP13.76□□□□□ -0.21
TCF3-219ENST00000610756 FAM167A-AS1Q96KT0 104 aa13.76□□□□□ -0.21
TCF3-219ENST00000610756 NIPSNAP3BQ9BS92 247 aa13.76□□□□□ -0.21
TCF3-219ENST00000610756 SLC25A2Q9BXI2 301 aa13.76□□□□□ -0.21
TCF3-219ENST00000610756 MBD2Q9UBB5 411 aa13.76□□□□□ -0.21
TCF3-219ENST00000610756 IGHV4-4A0A075B6R2 117 aa13.75□□□□□ -0.21
TCF3-219ENST00000610756 ZNF705GA8MUZ8 300 aaPredicted RBP13.75□□□□□ -0.21
TCF3-219ENST00000610756 PYYP10082 97 aa13.75□□□□□ -0.21
TCF3-219ENST00000610756 MIR17HGQ75NE6 70 aa13.75□□□□□ -0.21
TCF3-219ENST00000610756 LINC01587Q99440 93 aa13.75□□□□□ -0.21
TCF3-219ENST00000610756 MRPL32Q9BYC8 188 aaKnown RBP13.75□□□□□ -0.21
TCF3-219ENST00000610756 PRELID1Q9Y255 219 aa13.75□□□□□ -0.21
TCF3-219ENST00000610756 TIMM9Q9Y5J7 89 aa13.75□□□□□ -0.21
TCF3-219ENST00000610756 IFNA5P01569 189 aa13.74□□□□□ -0.21
TCF3-219ENST00000610756 PRM2P04554 102 aa13.74□□□□□ -0.21
TCF3-219ENST00000610756 TAS2R60P59551 318 aa13.74□□□□□ -0.21
TCF3-219ENST00000610756 SCGB1C1Q8TD33 95 aa13.74□□□□□ -0.21
TCF3-219ENST00000610756 C20orf144Q9BQM9 153 aa13.74□□□□□ -0.21
TCF3-219ENST00000610756 PARD6GQ9BYG4 376 aaPredicted RBP13.74□□□□□ -0.21
TCF3-219ENST00000610756 OR51M1Q9H341 326 aa13.74□□□□□ -0.21
TCF3-219ENST00000610756 PLA2G2EQ9NZK7 142 aa13.74□□□□□ -0.21
TCF3-219ENST00000610756 NPIPB6E9PJ23 425 aa13.73□□□□□ -0.21
TCF3-219ENST00000610756 NBEAP1P0C6P0 100 aa13.73□□□□□ -0.21
TCF3-219ENST00000610756 AZU1P20160 251 aa13.73□□□□□ -0.21
TCF3-219ENST00000610756 ODF3Q96PU9 254 aa13.73□□□□□ -0.21
TCF3-219ENST00000610756 SMIM3Q9BZL3 60 aa13.73□□□□□ -0.21
TCF3-219ENST00000610756 MED28Q9H204 178 aa13.73□□□□□ -0.21
TCF3-219ENST00000610756 FUT9Q9Y231 359 aa13.73□□□□□ -0.21
TCF3-219ENST00000610756 VPS13DQ5THJ4 4388 aa13.72□□□□□ -0.21
TCF3-219ENST00000610756 M0R3E3 92 aa13.72□□□□□ -0.21
TCF3-219ENST00000610756 CT45A10P0DMU9 189 aa13.72□□□□□ -0.21
TCF3-219ENST00000610756 BLNKQ8WV28 456 aa13.72□□□□□ -0.21
TCF3-219ENST00000610756 FAM210BQ96KR6 192 aa13.72□□□□□ -0.21
TCF3-219ENST00000610756 EPPK1P58107 5090 aaKnown RBP13.72□□□□□ -0.21
TCF3-219ENST00000610756 LYRM9A8MSI8 78 aa13.71□□□□□ -0.21
TCF3-219ENST00000610756 H7BYZ3 331 aa13.71□□□□□ -0.21
TCF3-219ENST00000610756 KIR3DS1Q14943 382 aa13.71□□□□□ -0.21
TCF3-219ENST00000610756 FCN2Q15485 313 aa13.71□□□□□ -0.21
TCF3-219ENST00000610756 RNF141Q8WVD5 230 aa13.71□□□□□ -0.21
TCF3-219ENST00000610756 LINC00477Q96M19 166 aa13.71□□□□□ -0.21
TCF3-219ENST00000610756 NDUFAF3Q9BU61 184 aa13.71□□□□□ -0.21
TCF3-219ENST00000610756 PAXXQ9BUH6 204 aa13.71□□□□□ -0.21
TCF3-219ENST00000610756 AAMDCQ9H7C9 122 aa13.71□□□□□ -0.21
TCF3-219ENST00000610756 WFDC1Q9HC57 220 aa13.71□□□□□ -0.21
TCF3-219ENST00000610756 PLAC8L1A1L4L8 177 aa13.7□□□□□ -0.22
TCF3-219ENST00000610756 DAD1P61803 113 aa13.7□□□□□ -0.22
TCF3-219ENST00000610756 FFAR4Q5NUL3 377 aa13.7□□□□□ -0.22
TCF3-219ENST00000610756 ZNF493Q6ZR52 646 aa13.7□□□□□ -0.22
TCF3-219ENST00000610756 EXOC3-AS1Q8N2X6 119 aa13.7□□□□□ -0.22
TCF3-219ENST00000610756 FXYD5Q96DB9 178 aa13.7□□□□□ -0.22
TCF3-219ENST00000610756 HTN1P15515 57 aa13.69□□□□□ -0.22
TCF3-219ENST00000610756 LEPP41159 167 aa13.69□□□□□ -0.22
TCF3-219ENST00000610756 GFI1BQ5VTD9 330 aa13.69□□□□□ -0.22
TCF3-219ENST00000610756 ASB13Q8WXK3 278 aa13.69□□□□□ -0.22
TCF3-219ENST00000610756 OR10J4P0C629 311 aa13.68□□□□□ -0.22
TCF3-219ENST00000610756 ICAM4Q14773 271 aa13.68□□□□□ -0.22
TCF3-219ENST00000610756 C16orf74Q96GX8 76 aa13.68□□□□□ -0.22
TCF3-219ENST00000610756 AGPAT4-IT1Q9H0P7 198 aa13.68□□□□□ -0.22
TCF3-219ENST00000610756 ERCC8Q13216 396 aa13.67□□□□□ -0.22
TCF3-219ENST00000610756 C9orf47Q6ZRZ4 202 aa13.67□□□□□ -0.22
TCF3-219ENST00000610756 LYPD1Q8N2G4 141 aa13.67□□□□□ -0.22
TCF3-219ENST00000610756 ZNF503Q96F45 646 aa13.67□□□□□ -0.22
TCF3-219ENST00000610756 FAM19A4Q96LR4 140 aa13.67□□□□□ -0.22
TCF3-219ENST00000610756 TIMM8BQ9Y5J9 83 aaPredicted RBP13.67□□□□□ -0.22
TCF3-219ENST00000610756 OR7C2O60412 319 aa13.66□□□□□ -0.22
TCF3-219ENST00000610756 SLC25A5P05141 298 aaKnown RBP13.66□□□□□ -0.22
TCF3-219ENST00000610756 GIPP09681 153 aaPredicted RBP13.66□□□□□ -0.22
TCF3-219ENST00000610756 TAS2R45P59539 299 aa13.66□□□□□ -0.22
TCF3-219ENST00000610756 RNASE8Q8TDE3 154 aaKnown RBP13.66□□□□□ -0.22
TCF3-219ENST00000610756 TMEM263Q8WUH6 116 aaKnown RBP13.66□□□□□ -0.22
TCF3-219ENST00000610756 AQP10Q96PS8 301 aa13.66□□□□□ -0.22
TCF3-219ENST00000610756 NMBP08949 121 aa13.65□□□□□ -0.22
TCF3-219ENST00000610756 P0DMU3 169 aa13.65□□□□□ -0.22
TCF3-219ENST00000610756 FAM231AP0DMU4 169 aa13.65□□□□□ -0.22
TCF3-219ENST00000610756 FAM231CP0DMU5 169 aa13.65□□□□□ -0.22
TCF3-219ENST00000610756 ACOT6Q3I5F7 207 aaPredicted RBP13.65□□□□□ -0.22
TCF3-219ENST00000610756 KHDC3LQ587J8 217 aa13.65□□□□□ -0.22
TCF3-219ENST00000610756 FAM122CQ6P4D5 195 aa13.65□□□□□ -0.22
TCF3-219ENST00000610756 CCDC28AQ8IWP9 274 aa13.65□□□□□ -0.22
TCF3-219ENST00000610756 TRAV12-3A0A0B4J271 114 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 CBY3A6NI87 242 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 KLLNB2CW77 178 aa13.64□□□□□ -0.23
TCF3-219ENST00000610756 DEFB130BP0DP73 79 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms