RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 CD5P06127 495 aa8.8□□□□□ -1
HLA-F-230ENST00000606273 SNRPCP09234 159 aaKnown RBP8.8□□□□□ -1
HLA-F-230ENST00000606273 AP2S1P53680 142 aaPredicted RBP8.8□□□□□ -1
HLA-F-230ENST00000606273 RAB31Q13636 194 aa8.8□□□□□ -1
HLA-F-230ENST00000606273 C1orf194Q5T5A4 169 aa8.8□□□□□ -1
HLA-F-230ENST00000606273 SPATA31B1PQ5VZV4 182 aa8.8□□□□□ -1
HLA-F-230ENST00000606273 LINC00305Q7Z4B0 112 aa8.8□□□□□ -1
HLA-F-230ENST00000606273 OR8I2Q8N0Y5 310 aa8.8□□□□□ -1
HLA-F-230ENST00000606273 SCRT2Q9NQ03 307 aa8.8□□□□□ -1
HLA-F-230ENST00000606273 APOBP04114 4563 aaKnown RBP8.8□□□□□ -1
HLA-F-230ENST00000606273 TRAV2A0A0B4J234 112 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 COX7A2P2O60397 106 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 MPDU1O75352 247 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 ZNF688P0C7X2 276 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 DEFB131AP59861 70 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 DEFB1P60022 68 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 CD300CQ08708 224 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 PXDC1Q5TGL8 231 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 C10orf113Q5VZT2 155 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 DNAJC4Q9NNZ3 241 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 NRN1Q9NPD7 142 aa8.79□□□□□ -1
HLA-F-230ENST00000606273 EIF3GO75821 320 aaKnown RBP eCLIP8.78□□□□□ -1
HLA-F-230ENST00000606273 NUP62P37198 522 aaPredicted RBP8.78□□□□□ -1
HLA-F-230ENST00000606273 PAFAH1B2P68402 229 aa8.78□□□□□ -1
HLA-F-230ENST00000606273 LGALS9BQ3B8N2 356 aa8.78□□□□□ -1
HLA-F-230ENST00000606273 RPL7L1Q6DKI1 246 aaKnown RBP8.78□□□□□ -1
HLA-F-230ENST00000606273 Q6ZRG5 221 aa8.78□□□□□ -1
HLA-F-230ENST00000606273 POM121L12Q8N7R1 296 aa8.78□□□□□ -1
HLA-F-230ENST00000606273 RARRES2Q99969 163 aa8.78□□□□□ -1
HLA-F-230ENST00000606273 PARD6GQ9BYG4 376 aaPredicted RBP8.78□□□□□ -1
HLA-F-230ENST00000606273 SEPSECSQ9HD40 501 aaKnown RBP8.78□□□□□ -1
HLA-F-230ENST00000606273 TRAV8-2A0A0B4J237 113 aa8.77□□□□□ -1.01
HLA-F-230ENST00000606273 KNCNA6PVL3 124 aa8.77□□□□□ -1.01
HLA-F-230ENST00000606273 C11orf94C9JXX5 98 aa8.77□□□□□ -1.01
HLA-F-230ENST00000606273 H3BTX0 84 aa8.77□□□□□ -1.01
HLA-F-230ENST00000606273 IFNA5P01569 189 aa8.77□□□□□ -1.01
HLA-F-230ENST00000606273 PRB4P10163 310 aaPredicted RBP8.77□□□□□ -1.01
HLA-F-230ENST00000606273 CXCL2P19875 107 aa8.77□□□□□ -1.01
HLA-F-230ENST00000606273 HSD17B11Q8NBQ5 300 aa8.77□□□□□ -1.01
HLA-F-230ENST00000606273 INO80EQ8NBZ0 244 aaPredicted RBP8.77□□□□□ -1.01
HLA-F-230ENST00000606273 SH3BGRL3Q9H299 93 aa8.77□□□□□ -1.01
HLA-F-230ENST00000606273 C11orf68Q9H3H3 251 aaKnown RBP8.77□□□□□ -1.01
HLA-F-230ENST00000606273 CYTL1Q9NRR1 136 aa8.77□□□□□ -1.01
HLA-F-230ENST00000606273 C16orf90A8MZG2 172 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 H3BQ15 152 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 RPL35AP18077 110 aaKnown RBP8.76□□□□□ -1.01
HLA-F-230ENST00000606273 HLA-DMBP28068 263 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 PSMG4Q5JS54 123 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 FFAR4Q5NUL3 377 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 MIR17HGQ75NE6 70 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 ZNF709Q8N972 641 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 OR1L4Q8NGR5 311 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 SCGB1C1Q8TD33 95 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 FAM167A-AS1Q96KT0 104 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 SLC25A2Q9BXI2 301 aa8.76□□□□□ -1.01
HLA-F-230ENST00000606273 IGHV4-4A0A075B6R2 117 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 C17orf112F2Z3M2 114 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 IGLC2P0DOY2 106 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 RPL7P18124 248 aaKnown RBP8.75□□□□□ -1.01
HLA-F-230ENST00000606273 ATP6V0CP27449 155 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 GALR1P47211 349 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 RAB2AP61019 212 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 GDF5OSQ5U4N7 250 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 FAM78BQ5VT40 261 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 TCTE3Q8IZS6 198 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 RNF182Q8N6D2 247 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 GPR82Q96P67 336 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 PFDN5Q99471 154 aa8.75□□□□□ -1.01
HLA-F-230ENST00000606273 AGRNO00468 2067 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 A0A087X0K7 114 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 HMSDA8MTL9 139 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 F6UB75 175 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 SLC17A3O00476 420 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 DEFB4AO15263 64 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 PYYP10082 97 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 KCNRGQ8N5I3 272 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 OR11H2Q8NH07 326 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 LINC00052Q96N35 136 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 MLST8Q9BVC4 326 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 ZNF586Q9NXT0 402 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 TIMM9Q9Y5J7 89 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 DNAH5Q8TE73 4624 aa8.74□□□□□ -1.01
HLA-F-230ENST00000606273 P0DMU3 169 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 FAM231AP0DMU4 169 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 FAM231CP0DMU5 169 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 PSMB3P49720 205 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 CMC4P56277 68 aaPredicted RBP8.73□□□□□ -1.01
HLA-F-230ENST00000606273 ZNF266Q14584 549 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 ZNF345Q14585 488 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 RBMY1FQ15415 496 aaKnown RBP8.73□□□□□ -1.01
HLA-F-230ENST00000606273 ACTL10Q5JWF8 245 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 Q6ZR54 194 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 BPIFA4PQ86YQ2 179 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 SAT2Q96F10 170 aaPredicted RBP8.73□□□□□ -1.01
HLA-F-230ENST00000606273 CSTL1Q9H114 145 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 KCNIP2Q9NS61 270 aa8.73□□□□□ -1.01
HLA-F-230ENST00000606273 ISLRO14498 428 aa8.72□□□□□ -1.01
HLA-F-230ENST00000606273 NDUFB4O95168 129 aa8.72□□□□□ -1.01
HLA-F-230ENST00000606273 S100A7P31151 101 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms