RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 SERTM2A0A1B0GWG4 89 aa16.72■□□□□ 0.27
GRAMD1A-212ENST00000600231 PAX1P15863 534 aa16.72■□□□□ 0.27
GRAMD1A-212ENST00000600231 PMCHP20382 165 aa16.72■□□□□ 0.27
GRAMD1A-212ENST00000600231 FOXA3P55318 350 aaPredicted RBP16.72■□□□□ 0.27
GRAMD1A-212ENST00000600231 ATP5G2Q06055 141 aa16.72■□□□□ 0.27
GRAMD1A-212ENST00000600231 RNF114Q9Y508 228 aa16.72■□□□□ 0.27
GRAMD1A-212ENST00000600231 IGHV3OR16-13A0A075B7E8 117 aa16.71■□□□□ 0.27
GRAMD1A-212ENST00000600231 IGHV3-74A0A0B4J1X5 117 aa16.71■□□□□ 0.27
GRAMD1A-212ENST00000600231 ZNF705FA8MVS1 300 aaPredicted RBP16.71■□□□□ 0.27
GRAMD1A-212ENST00000600231 H3BUX3 64 aa16.71■□□□□ 0.27
GRAMD1A-212ENST00000600231 AVPP01185 164 aa16.71■□□□□ 0.27
GRAMD1A-212ENST00000600231 APOHP02749 345 aaPredicted RBP16.71■□□□□ 0.27
GRAMD1A-212ENST00000600231 ZNF324O75467 553 aaPredicted RBP16.7■□□□□ 0.26
GRAMD1A-212ENST00000600231 CT45A10P0DMU9 189 aa16.7■□□□□ 0.26
GRAMD1A-212ENST00000600231 CRIP2P52943 208 aaPredicted RBP16.7■□□□□ 0.26
GRAMD1A-212ENST00000600231 DEFA6Q01524 100 aa16.7■□□□□ 0.26
GRAMD1A-212ENST00000600231 FAM19A2Q8N3H0 131 aa16.7■□□□□ 0.26
GRAMD1A-212ENST00000600231 ZNF705DP0CH99 300 aaPredicted RBP16.7■□□□□ 0.26
GRAMD1A-212ENST00000600231 ZNF705BP0CI00 300 aaPredicted RBP16.7■□□□□ 0.26
GRAMD1A-212ENST00000600231 KLF5Q13887 457 aaPredicted RBP16.7■□□□□ 0.26
GRAMD1A-212ENST00000600231 NRN1Q9NPD7 142 aa16.7■□□□□ 0.26
GRAMD1A-212ENST00000600231 ANKRD17O75179 2603 aaKnown RBP16.7■□□□□ 0.26
GRAMD1A-212ENST00000600231 B4DSR2 109 aa16.69■□□□□ 0.26
GRAMD1A-212ENST00000600231 ZNF207O43670 478 aaKnown RBP16.69■□□□□ 0.26
GRAMD1A-212ENST00000600231 ARL6IP6Q8N6S5 226 aa16.69■□□□□ 0.26
GRAMD1A-212ENST00000600231 VGLL1Q99990 258 aa16.69■□□□□ 0.26
GRAMD1A-212ENST00000600231 IGHV3-49A0A0A0MS15 119 aa16.69■□□□□ 0.26
GRAMD1A-212ENST00000600231 TRGV3P03979 118 aa16.69■□□□□ 0.26
GRAMD1A-212ENST00000600231 RAB9AP51151 201 aa16.69■□□□□ 0.26
GRAMD1A-212ENST00000600231 RELQ04864 619 aaPredicted RBP16.69■□□□□ 0.26
GRAMD1A-212ENST00000600231 FAM209BQ5JX69 171 aa16.69■□□□□ 0.26
GRAMD1A-212ENST00000600231 HAX1O00165 279 aa16.68■□□□□ 0.26
GRAMD1A-212ENST00000600231 LCN12Q6JVE5 192 aa16.68■□□□□ 0.26
GRAMD1A-212ENST00000600231 Q8TAT8 98 aa16.68■□□□□ 0.26
GRAMD1A-212ENST00000600231 PRR25Q96S07 402 aa16.68■□□□□ 0.26
GRAMD1A-212ENST00000600231 FBN2P35556 2912 aa16.68■□□□□ 0.26
GRAMD1A-212ENST00000600231 A6NDX4 124 aa16.68■□□□□ 0.26
GRAMD1A-212ENST00000600231 C14orf144Q96I85 54 aa16.68■□□□□ 0.26
GRAMD1A-212ENST00000600231 IGF1P05019 195 aa16.67■□□□□ 0.26
GRAMD1A-212ENST00000600231 ARMS2P0C7Q2 107 aa16.67■□□□□ 0.26
GRAMD1A-212ENST00000600231 FAM223BA6NKX1 122 aa16.67■□□□□ 0.26
GRAMD1A-212ENST00000600231 BLCAPP62952 87 aa16.67■□□□□ 0.26
GRAMD1A-212ENST00000600231 FAM223AQ8IWN6 122 aa16.67■□□□□ 0.26
GRAMD1A-212ENST00000600231 EPG5Q9HCE0 2579 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 A0A087X0K7 114 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 A0A1B0GUT8 65 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 NTF3P20783 257 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 KRTDAPP60985 99 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 SAPCD1Q5SSQ6 148 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 METTL26Q96S19 204 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 PTPN13Q12923 2485 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 IGHG2P01859 326 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 NIT1Q86X76 327 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 RNF182Q8N6D2 247 aa16.66■□□□□ 0.26
GRAMD1A-212ENST00000600231 SH2D1AO60880 128 aa16.65■□□□□ 0.26
GRAMD1A-212ENST00000600231 DSCR9P59020 149 aa16.65■□□□□ 0.26
GRAMD1A-212ENST00000600231 SRSF1Q07955 248 aaKnown RBP eCLIP16.65■□□□□ 0.26
GRAMD1A-212ENST00000600231 TDRG1Q3Y452 100 aa16.65■□□□□ 0.26
GRAMD1A-212ENST00000600231 Q6ZS46 218 aa16.65■□□□□ 0.26
GRAMD1A-212ENST00000600231 COX8CQ7Z4L0 72 aa16.65■□□□□ 0.26
GRAMD1A-212ENST00000600231 TPPP3Q9BW30 176 aa16.65■□□□□ 0.26
GRAMD1A-212ENST00000600231 PPIFP30405 207 aaKnown RBP16.65■□□□□ 0.26
GRAMD1A-212ENST00000600231 TMSB15BA0A087X1C1 80 aa16.64■□□□□ 0.25
GRAMD1A-212ENST00000600231 PRAC2D3DTV9 90 aa16.64■□□□□ 0.25
GRAMD1A-212ENST00000600231 FAM162BQ5T6X4 162 aa16.64■□□□□ 0.25
GRAMD1A-212ENST00000600231 A1L4Q6 167 aa16.64■□□□□ 0.25
GRAMD1A-212ENST00000600231 HSBP1O75506 76 aa16.64■□□□□ 0.25
GRAMD1A-212ENST00000600231 C1orf194Q5T5A4 169 aa16.64■□□□□ 0.25
GRAMD1A-212ENST00000600231 ZNF843Q8N446 348 aa16.64■□□□□ 0.25
GRAMD1A-212ENST00000600231 LOC102724200A0A096LPH7 203 aaPredicted RBP16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 TRBV12-3P01733 135 aa16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 ZNF80P51504 273 aaPredicted RBP16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 RNASEKQ6P5S7 137 aaKnown RBP16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 URB1-AS1Q96HZ7 61 aa16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 ATP6V0BQ99437 205 aa16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 U3KQE9 123 aa16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 UBR5O95071 2799 aaPredicted RBP16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 ZANQ9Y493 2812 aa16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 FBLL1A6NHQ2 334 aaKnown RBP16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 REC114Q7Z4M0 266 aa16.63■□□□□ 0.25
GRAMD1A-212ENST00000600231 TMEM189A5PLL7 270 aa16.62■□□□□ 0.25
GRAMD1A-212ENST00000600231 ARL3P36405 182 aa16.62■□□□□ 0.25
GRAMD1A-212ENST00000600231 ERCC8Q13216 396 aa16.62■□□□□ 0.25
GRAMD1A-212ENST00000600231 RIGQ13278 110 aa16.62■□□□□ 0.25
GRAMD1A-212ENST00000600231 TEX43Q6ZNM6 134 aa16.62■□□□□ 0.25
GRAMD1A-212ENST00000600231 M0QZ24 198 aa16.62■□□□□ 0.25
GRAMD1A-212ENST00000600231 COX6B1P14854 86 aa16.62■□□□□ 0.25
GRAMD1A-212ENST00000600231 SLC25A16P16260 332 aa16.62■□□□□ 0.25
GRAMD1A-212ENST00000600231 Q8N976 141 aa16.62■□□□□ 0.25
GRAMD1A-212ENST00000600231 KLK15Q9H2R5 256 aa16.62■□□□□ 0.25
GRAMD1A-212ENST00000600231 M0QZK8 103 aa16.61■□□□□ 0.25
GRAMD1A-212ENST00000600231 SLC50A1Q9BRV3 221 aa16.61■□□□□ 0.25
GRAMD1A-212ENST00000600231 NDFIP1Q9BT67 221 aa16.61■□□□□ 0.25
GRAMD1A-212ENST00000600231 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.61■□□□□ 0.25
GRAMD1A-212ENST00000600231 Q6AWC8 147 aa16.61■□□□□ 0.25
GRAMD1A-212ENST00000600231 C3orf79P0CE67 100 aa16.6■□□□□ 0.25
GRAMD1A-212ENST00000600231 GATA3P23771 443 aa16.6■□□□□ 0.25
GRAMD1A-212ENST00000600231 MAPK1IP1LQ8NDC0 245 aa16.6■□□□□ 0.25
GRAMD1A-212ENST00000600231 KIR2DL5BA0A0G2JN68 375 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms