RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 CMTM2Q8TAZ6 248 aa9.12□□□□□ -0.95
TGFB1-204ENST00000600196 RPUSD4Q96CM3 377 aaKnown RBP9.12□□□□□ -0.95
TGFB1-204ENST00000600196 LINC00477Q96M19 166 aa9.12□□□□□ -0.95
TGFB1-204ENST00000600196 LINC00052Q96N35 136 aa9.12□□□□□ -0.95
TGFB1-204ENST00000600196 ODF3Q96PU9 254 aa9.12□□□□□ -0.95
TGFB1-204ENST00000600196 SMDT1Q9H4I9 107 aa9.12□□□□□ -0.95
TGFB1-204ENST00000600196 LENEPQ9Y5L5 61 aa9.12□□□□□ -0.95
TGFB1-204ENST00000600196 A0A0J9YX75 114 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 PGPA6NDG6 321 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 FAM74A7A6NL05 159 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 SLC17A3O00476 420 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 UBE2CO00762 179 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 HMGB3O15347 200 aaKnown RBP9.11□□□□□ -0.95
TGFB1-204ENST00000600196 AMBPP02760 352 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 S100A9P06702 114 aaKnown RBP9.11□□□□□ -0.95
TGFB1-204ENST00000600196 HLA-DRB4P13762 266 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 ICAM4Q14773 271 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 LINC00322Q6ZN03 302 aaPredicted RBP9.11□□□□□ -0.95
TGFB1-204ENST00000600196 C9orf47Q6ZRZ4 202 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 CCDC28AQ8IWP9 274 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 ZNF738Q8NE65 137 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 OR10J6PQ8NGY7 276 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 AURKAIP1Q9NWT8 199 aaPredicted RBP9.11□□□□□ -0.95
TGFB1-204ENST00000600196 HLA-DRB4X5D2U9 266 aa9.11□□□□□ -0.95
TGFB1-204ENST00000600196 NOTCH1P46531 2555 aa9.1□□□□□ -0.95
TGFB1-204ENST00000600196 H3BMM0 161 aa9.1□□□□□ -0.95
TGFB1-204ENST00000600196 FGF8P55075 233 aaPredicted RBP9.1□□□□□ -0.95
TGFB1-204ENST00000600196 SUMO1P63165 101 aaKnown RBP9.1□□□□□ -0.95
TGFB1-204ENST00000600196 STHQ8IWL8 128 aa9.1□□□□□ -0.95
TGFB1-204ENST00000600196 FAM24BQ8N5W8 94 aa9.1□□□□□ -0.95
TGFB1-204ENST00000600196 OR8A1Q8NGG7 326 aa9.1□□□□□ -0.95
TGFB1-204ENST00000600196 PRR25Q96S07 402 aa9.1□□□□□ -0.95
TGFB1-204ENST00000600196 TUBA4BQ9H853 241 aa9.1□□□□□ -0.95
TGFB1-204ENST00000600196 EPDR1Q9UM22 224 aa9.1□□□□□ -0.95
TGFB1-204ENST00000600196 LOC102724200A0A096LPH7 203 aaPredicted RBP9.09□□□□□ -0.95
TGFB1-204ENST00000600196 DIRC3C9JPN6 131 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 NPIPB6E9PJ23 425 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 RGS13O14921 159 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 PDE6DO43924 150 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 APOC4P55056 127 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 CLLU1Q5K131 121 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 TRPT1Q86TN4 253 aaKnown RBP9.09□□□□□ -0.95
TGFB1-204ENST00000600196 IQCF2Q8IXL9 164 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 C20orf173Q96LM9 149 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 ATG101Q9BSB4 218 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 C1QTNF4Q9BXJ3 329 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 VAX2Q9UIW0 290 aa9.09□□□□□ -0.95
TGFB1-204ENST00000600196 TRBV6-1A0A0K0K1D8 114 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 PAGE4O60829 102 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 TCRAP04437 139 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 IGHV4-30-4P0DP06 118 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 BCL2P10415 239 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 TSPOP30536 169 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 EXOC3-AS1Q8N2X6 119 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 DEFB125Q8N687 156 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 TMPRSS5Q9H3S3 457 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 SRD5A3Q9H8P0 318 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 KLF12Q9Y4X4 402 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 SELENOKQ9Y6D0 94 aa9.08□□□□□ -0.96
TGFB1-204ENST00000600196 GGTLC3B5MD39 225 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 H3BTX0 84 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 CCL20P78556 96 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 IFITM2Q01629 132 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 MEF2BQ02080 365 aaPredicted RBP9.07□□□□□ -0.96
TGFB1-204ENST00000600196 ACTL10Q5JWF8 245 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 CST9LP1Q5W188 147 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 APRG1Q8IVJ8 170 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 RNF182Q8N6D2 247 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 CYB561D1Q8N8Q1 229 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 C20orf144Q9BQM9 153 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 CSTL1Q9H114 145 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 MED9Q9NWA0 146 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 GNG13Q9P2W3 67 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 YTHDF2Q9Y5A9 579 aaKnown RBP9.07□□□□□ -0.96
TGFB1-204ENST00000600196 CMYA5Q8N3K9 4069 aa9.07□□□□□ -0.96
TGFB1-204ENST00000600196 RBFOX3A6NFN3 312 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 C11orf94C9JXX5 98 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 TMEM250H0YL14 139 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 K7EIL1 84 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 M0R3E3 92 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 CRISP2P16562 243 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 CNN1P51911 297 aaKnown RBP9.06□□□□□ -0.96
TGFB1-204ENST00000600196 ZNF506Q5JVG8 444 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 SAPCD1Q5SSQ6 148 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 TMEM78Q5T7P6 136 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 IGFL4Q6B9Z1 124 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 Q6ZWC4 215 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 TMEM75Q8N9X5 138 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 C11orf52Q96A22 123 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 FAM210AQ96ND0 272 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 ZNF492Q9P255 531 aa9.06□□□□□ -0.96
TGFB1-204ENST00000600196 LOC102723971A0A1B0GUV8 181 aa9.05□□□□□ -0.96
TGFB1-204ENST00000600196 ZNF705FA8MVS1 300 aaPredicted RBP9.05□□□□□ -0.96
TGFB1-204ENST00000600196 EIF3GO75821 320 aaKnown RBP eCLIP9.05□□□□□ -0.96
TGFB1-204ENST00000600196 SNRPCP09234 159 aaKnown RBP9.05□□□□□ -0.96
TGFB1-204ENST00000600196 HLA-DMBP28068 263 aa9.05□□□□□ -0.96
TGFB1-204ENST00000600196 LEPP41159 167 aa9.05□□□□□ -0.96
TGFB1-204ENST00000600196 ZNF138P52744 262 aa9.05□□□□□ -0.96
TGFB1-204ENST00000600196 UBE2G2P60604 165 aa9.05□□□□□ -0.96
TGFB1-204ENST00000600196 SMIM12Q96EX1 92 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 153.2 ms