RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 XCL2Q9UBD3 114 aa9.97□□□□□ -0.81
SCAF1-203ENST00000598359 LOC102723971A0A1B0GUV8 181 aa9.96□□□□□ -0.82
SCAF1-203ENST00000598359 FABP1P07148 127 aa9.96□□□□□ -0.82
SCAF1-203ENST00000598359 KHDC3LQ587J8 217 aa9.96□□□□□ -0.82
SCAF1-203ENST00000598359 SSX7Q7RTT5 188 aa9.96□□□□□ -0.82
SCAF1-203ENST00000598359 RPP25LQ8N5L8 163 aaKnown RBP9.96□□□□□ -0.82
SCAF1-203ENST00000598359 ZNF709Q8N972 641 aa9.96□□□□□ -0.82
SCAF1-203ENST00000598359 EIF5A2Q9GZV4 153 aaKnown RBP9.96□□□□□ -0.82
SCAF1-203ENST00000598359 SLC35B3Q9H1N7 401 aa9.96□□□□□ -0.82
SCAF1-203ENST00000598359 ELOA3CA0A087WX78 387 aaPredicted RBP9.95□□□□□ -0.82
SCAF1-203ENST00000598359 SMCO3A2RU48 225 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 MAP1LC3B2A6NCE7 125 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 SOCS3O14543 225 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 SRP19P09132 144 aaKnown RBP9.95□□□□□ -0.82
SCAF1-203ENST00000598359 HLA-DRB4P13762 266 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 ORM2P19652 201 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 TAGLN2P37802 199 aaKnown RBP9.95□□□□□ -0.82
SCAF1-203ENST00000598359 PPT1P50897 306 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 ICAM4Q14773 271 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 ACOT6Q3I5F7 207 aaPredicted RBP9.95□□□□□ -0.82
SCAF1-203ENST00000598359 FFAR4Q5NUL3 377 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 OR8I2Q8N0Y5 310 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 SUN5Q8TC36 379 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 MGST2Q99735 147 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 MAP1LC3BQ9GZQ8 125 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 SLC25A22Q9H936 323 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 DOK5Q9P104 306 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 HLA-DRB4X5D2U9 266 aa9.95□□□□□ -0.82
SCAF1-203ENST00000598359 F6UB75 175 aa9.94□□□□□ -0.82
SCAF1-203ENST00000598359 BCL2P10415 239 aa9.94□□□□□ -0.82
SCAF1-203ENST00000598359 MIFP14174 115 aa9.94□□□□□ -0.82
SCAF1-203ENST00000598359 C1orf194Q5T5A4 169 aa9.94□□□□□ -0.82
SCAF1-203ENST00000598359 TEPPQ6URK8 271 aa9.94□□□□□ -0.82
SCAF1-203ENST00000598359 OR10G9Q8NGN4 311 aa9.94□□□□□ -0.82
SCAF1-203ENST00000598359 OR10G7Q8NGN6 311 aa9.94□□□□□ -0.82
SCAF1-203ENST00000598359 C20orf173Q96LM9 149 aa9.94□□□□□ -0.82
SCAF1-203ENST00000598359 C17orf77Q96MU5 243 aa9.94□□□□□ -0.82
SCAF1-203ENST00000598359 ACTR3CQ9C0K3 210 aaPredicted RBP9.94□□□□□ -0.82
SCAF1-203ENST00000598359 SEPSECSQ9HD40 501 aaKnown RBP9.94□□□□□ -0.82
SCAF1-203ENST00000598359 CELA1Q9UNI1 258 aa9.94□□□□□ -0.82
SCAF1-203ENST00000598359 KMT2AQ03164 3969 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 ZNF98A6NK75 572 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 IFNA1P01562 189 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 HLA-DMBP28068 263 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 ID1P41134 155 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 RPL29P47914 159 aaKnown RBP9.93□□□□□ -0.82
SCAF1-203ENST00000598359 PSMB3P49720 205 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 BTN1A1Q13410 526 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 LCN15Q6UWW0 184 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 TMEM144Q7Z5S9 345 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 CLRN3Q8NCR9 226 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 OR4B1Q8NGF8 309 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 OR1B1Q8NGR6 318 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 SAV1Q9H4B6 383 aaPredicted RBP9.93□□□□□ -0.82
SCAF1-203ENST00000598359 SLC39A9Q9NUM3 307 aa9.93□□□□□ -0.82
SCAF1-203ENST00000598359 A0A1B0GV50 99 aa9.92□□□□□ -0.82
SCAF1-203ENST00000598359 CDC34P49427 236 aaPredicted RBP9.92□□□□□ -0.82
SCAF1-203ENST00000598359 PRR20EP86478 221 aa9.92□□□□□ -0.82
SCAF1-203ENST00000598359 PRR20CP86479 221 aa9.92□□□□□ -0.82
SCAF1-203ENST00000598359 PRR20DP86480 221 aa9.92□□□□□ -0.82
SCAF1-203ENST00000598359 PRR20BP86481 221 aa9.92□□□□□ -0.82
SCAF1-203ENST00000598359 PRR20AP86496 221 aa9.92□□□□□ -0.82
SCAF1-203ENST00000598359 IGFL4Q6B9Z1 124 aa9.92□□□□□ -0.82
SCAF1-203ENST00000598359 CYP2G1PQ6ZSU1 146 aa9.92□□□□□ -0.82
SCAF1-203ENST00000598359 Q6ZTC4 211 aa9.92□□□□□ -0.82
SCAF1-203ENST00000598359 PXMP4Q9Y6I8 212 aa9.92□□□□□ -0.82
SCAF1-203ENST00000598359 IGHV3OR16-12A0A075B7B8 117 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 IGLL5B9A064 214 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 PRB4P10163 310 aaPredicted RBP9.91□□□□□ -0.82
SCAF1-203ENST00000598359 NUTF2P61970 127 aaKnown RBP9.91□□□□□ -0.82
SCAF1-203ENST00000598359 RAB31Q13636 194 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 FAM78BQ5VT40 261 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 FAM122CQ6P4D5 195 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 FOXI2Q6ZQN5 318 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 C2CD4CQ8TF44 421 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 RAB24Q969Q5 203 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 C16orf92Q96LL3 132 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 C1QTNF4Q9BXJ3 329 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 MANBALQ9NQG1 85 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 VAX2Q9UIW0 290 aa9.91□□□□□ -0.82
SCAF1-203ENST00000598359 VPS13DQ5THJ4 4388 aa9.9□□□□□ -0.82
SCAF1-203ENST00000598359 FAM74A7A6NL05 159 aa9.9□□□□□ -0.82
SCAF1-203ENST00000598359 ISLRO14498 428 aa9.9□□□□□ -0.82
SCAF1-203ENST00000598359 GALR1P47211 349 aa9.9□□□□□ -0.82
SCAF1-203ENST00000598359 FAM74A3Q4VXF1 159 aa9.9□□□□□ -0.82
SCAF1-203ENST00000598359 SOHLH1Q5JUK2 328 aa9.9□□□□□ -0.82
SCAF1-203ENST00000598359 MIC13Q5XKP0 118 aa9.9□□□□□ -0.82
SCAF1-203ENST00000598359 RXFP4Q8TDU9 374 aa9.9□□□□□ -0.82
SCAF1-203ENST00000598359 GNG13Q9P2W3 67 aa9.9□□□□□ -0.82
SCAF1-203ENST00000598359 SLC45A2Q9UMX9 530 aa9.9□□□□□ -0.82
SCAF1-203ENST00000598359 HECTD4Q9Y4D8 3996 aa9.9□□□□□ -0.83
SCAF1-203ENST00000598359 A0A0J9YX75 114 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 H3BRN7 92 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 LINC00869P0C866 280 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 STAG3L2P0CL84 134 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 STAG3L3P0CL85 134 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 EMP1P54849 157 aa9.89□□□□□ -0.83
SCAF1-203ENST00000598359 FGF8P55075 233 aaPredicted RBP9.89□□□□□ -0.83
SCAF1-203ENST00000598359 B2MP61769 119 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms