RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 FAM231CP0DMU5 169 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 LGALS9BQ3B8N2 356 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 ACTL10Q5JWF8 245 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 FAM78BQ5VT40 261 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 STXBP6Q8NFX7 210 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 DCANP1Q8TF63 244 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 SH3BGRL3Q9H299 93 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 SLC25A32Q9H2D1 315 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 RFNGQ9Y644 331 aa11.79□□□□□ -0.52
SHKBP1-215ENST00000597649 A0A1W2PPV4 95 aa11.78□□□□□ -0.52
SHKBP1-215ENST00000597649 TPT1P13693 172 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-215ENST00000597649 RPL7P18124 248 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-215ENST00000597649 M6PRP20645 277 aa11.78□□□□□ -0.52
SHKBP1-215ENST00000597649 RHOBP62745 196 aa11.78□□□□□ -0.52
SHKBP1-215ENST00000597649 C9orf62Q8N4C0 152 aa11.78□□□□□ -0.52
SHKBP1-215ENST00000597649 MRPL32Q9BYC8 188 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-215ENST00000597649 NKX2-5P52952 324 aaPredicted RBP11.77□□□□□ -0.53
SHKBP1-215ENST00000597649 AKR1C8PQ5T2L2 129 aa11.77□□□□□ -0.53
SHKBP1-215ENST00000597649 Q6ZR54 194 aa11.77□□□□□ -0.53
SHKBP1-215ENST00000597649 BPIFA4PQ86YQ2 179 aa11.77□□□□□ -0.53
SHKBP1-215ENST00000597649 BAP18Q8IXM2 172 aa11.77□□□□□ -0.53
SHKBP1-215ENST00000597649 OR10G4Q8NGN3 311 aa11.77□□□□□ -0.53
SHKBP1-215ENST00000597649 OR10G9Q8NGN4 311 aa11.77□□□□□ -0.53
SHKBP1-215ENST00000597649 OR10G7Q8NGN6 311 aa11.77□□□□□ -0.53
SHKBP1-215ENST00000597649 NDUFAF3Q9BU61 184 aa11.77□□□□□ -0.53
SHKBP1-215ENST00000597649 FUT9Q9Y231 359 aa11.77□□□□□ -0.53
SHKBP1-215ENST00000597649 IGLV2-18A0A075B6J9 118 aa11.76□□□□□ -0.53
SHKBP1-215ENST00000597649 TRAV5A0A0B4J249 113 aa11.76□□□□□ -0.53
SHKBP1-215ENST00000597649 RAB2AP61019 212 aa11.76□□□□□ -0.53
SHKBP1-215ENST00000597649 FAM122CQ6P4D5 195 aa11.76□□□□□ -0.53
SHKBP1-215ENST00000597649 MIR17HGQ75NE6 70 aa11.76□□□□□ -0.53
SHKBP1-215ENST00000597649 SLC51BQ86UW2 128 aa11.76□□□□□ -0.53
SHKBP1-215ENST00000597649 SEPSECSQ9HD40 501 aaKnown RBP11.76□□□□□ -0.53
SHKBP1-215ENST00000597649 NRN1Q9NPD7 142 aa11.76□□□□□ -0.53
SHKBP1-215ENST00000597649 TAS2R45P59539 299 aa11.75□□□□□ -0.53
SHKBP1-215ENST00000597649 MORN5Q5VZ52 161 aa11.75□□□□□ -0.53
SHKBP1-215ENST00000597649 EIF5AL1Q6IS14 154 aaKnown RBP11.75□□□□□ -0.53
SHKBP1-215ENST00000597649 LRRC20Q8TCA0 184 aa11.75□□□□□ -0.53
SHKBP1-215ENST00000597649 SEC11BP0C7V7 166 aa11.74□□□□□ -0.53
SHKBP1-215ENST00000597649 MEOX2P50222 304 aa11.74□□□□□ -0.53
SHKBP1-215ENST00000597649 SPATA31B1PQ5VZV4 182 aa11.74□□□□□ -0.53
SHKBP1-215ENST00000597649 STOML3Q8TAV4 291 aa11.74□□□□□ -0.53
SHKBP1-215ENST00000597649 ACTR3CQ9C0K3 210 aaPredicted RBP11.74□□□□□ -0.53
SHKBP1-215ENST00000597649 XCL2Q9UBD3 114 aa11.74□□□□□ -0.53
SHKBP1-215ENST00000597649 ID1P41134 155 aa11.73□□□□□ -0.53
SHKBP1-215ENST00000597649 CDC34P49427 236 aaPredicted RBP11.73□□□□□ -0.53
SHKBP1-215ENST00000597649 KHDC3LQ587J8 217 aa11.73□□□□□ -0.53
SHKBP1-215ENST00000597649 PSMG4Q5JS54 123 aa11.73□□□□□ -0.53
SHKBP1-215ENST00000597649 SAMD13Q5VXD3 122 aa11.73□□□□□ -0.53
SHKBP1-215ENST00000597649 OR7C2O60412 319 aa11.72□□□□□ -0.53
SHKBP1-215ENST00000597649 SNRPD3P62318 126 aaKnown RBP11.72□□□□□ -0.53
SHKBP1-215ENST00000597649 TMED6Q8WW62 240 aa11.72□□□□□ -0.53
SHKBP1-215ENST00000597649 C16orf92Q96LL3 132 aa11.72□□□□□ -0.53
SHKBP1-215ENST00000597649 PAXXQ9BUH6 204 aa11.72□□□□□ -0.53
SHKBP1-215ENST00000597649 SLC25A2Q9BXI2 301 aa11.72□□□□□ -0.53
SHKBP1-215ENST00000597649 OR51M1Q9H341 326 aa11.72□□□□□ -0.53
SHKBP1-215ENST00000597649 RPRMQ9NS64 109 aa11.72□□□□□ -0.53
SHKBP1-215ENST00000597649 PLA2G2EQ9NZK7 142 aa11.72□□□□□ -0.53
SHKBP1-215ENST00000597649 TMEM14CQ9P0S9 112 aa11.72□□□□□ -0.53
SHKBP1-215ENST00000597649 UMAD1C9J7I0 102 aa11.71□□□□□ -0.53
SHKBP1-215ENST00000597649 H3BMM0 161 aa11.71□□□□□ -0.53
SHKBP1-215ENST00000597649 BOLA2-SMG1P6H3BVE0 249 aa11.71□□□□□ -0.53
SHKBP1-215ENST00000597649 GUK1Q16774 197 aa11.71□□□□□ -0.53
SHKBP1-215ENST00000597649 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.71□□□□□ -0.53
SHKBP1-215ENST00000597649 A0A087X0K7 114 aa11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 MRPS12O15235 138 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 HMGB3O15347 200 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 SNRPCP09234 159 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 PYYP10082 97 aa11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 HIST1H1EP10412 219 aaKnown RBP11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 EMP1P54849 157 aa11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 LCN15Q6UWW0 184 aa11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 ZNF705AQ6ZN79 300 aaPredicted RBP11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 FAM167A-AS1Q96KT0 104 aa11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 LINC00052Q96N35 136 aa11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
SHKBP1-215ENST00000597649 H3BTX0 84 aa11.69□□□□□ -0.54
SHKBP1-215ENST00000597649 ISLRO14498 428 aa11.69□□□□□ -0.54
SHKBP1-215ENST00000597649 EIF3GO75821 320 aaKnown RBP eCLIP11.69□□□□□ -0.54
SHKBP1-215ENST00000597649 SPART-AS1P0CW21 52 aa11.69□□□□□ -0.54
SHKBP1-215ENST00000597649 PSMB3P49720 205 aa11.69□□□□□ -0.54
SHKBP1-215ENST00000597649 UBE2L3P68036 154 aaKnown RBP11.69□□□□□ -0.54
SHKBP1-215ENST00000597649 PQLC2Q6ZP29 291 aa11.69□□□□□ -0.54
SHKBP1-215ENST00000597649 UBE2DNLQ8IWF7 75 aa11.69□□□□□ -0.54
SHKBP1-215ENST00000597649 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
SHKBP1-215ENST00000597649 RNF141Q8WVD5 230 aa11.69□□□□□ -0.54
SHKBP1-215ENST00000597649 CTXND1A0A1B0GTU2 59 aa11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 ZNF705FA8MVS1 300 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 H3BQ15 152 aa11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 OR10J4P0C629 311 aa11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 ZNF705DP0CH99 300 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 ZNF705BP0CI00 300 aaPredicted RBP11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 IGLC2P0DOY2 106 aa11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 DEFB1P60022 68 aa11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 DPPA3Q6W0C5 159 aa11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 IQCF2Q8IXL9 164 aa11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 FAM213BQ8TBF2 198 aa11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 NEU1Q99519 415 aa11.68□□□□□ -0.54
SHKBP1-215ENST00000597649 SLC50A1Q9BRV3 221 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms