RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SNRPCP09234 159 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-203ENST00000594298 CNN1P51911 297 aaKnown RBP12.58□□□□□ -0.4
SHKBP1-203ENST00000594298 PDE6HQ13956 83 aa12.58□□□□□ -0.4
SHKBP1-203ENST00000594298 POM121L12Q8N7R1 296 aa12.58□□□□□ -0.4
SHKBP1-203ENST00000594298 OR8A1Q8NGG7 326 aa12.58□□□□□ -0.4
SHKBP1-203ENST00000594298 SAT2Q96F10 170 aaPredicted RBP12.58□□□□□ -0.4
SHKBP1-203ENST00000594298 DNAH2Q9P225 4427 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 A8MTW9 85 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 H3BTX0 84 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 P0DMU3 169 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 FAM231AP0DMU4 169 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 FAM231CP0DMU5 169 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 TAS2R45P59539 299 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 RHOBP62745 196 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 HIST1H1AQ02539 215 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 ACOT6Q3I5F7 207 aaPredicted RBP12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 MIR17HGQ75NE6 70 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 OR51M1Q9H341 326 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 ZNF586Q9NXT0 402 aa12.57□□□□□ -0.4
SHKBP1-203ENST00000594298 TRBV19A0A075B6N1 114 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 FXYD7P58549 80 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 OR10J6PQ8NGY7 276 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 NEU1Q99519 415 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 NDUFAF3Q9BU61 184 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 PAXXQ9BUH6 204 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 SLC25A2Q9BXI2 301 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 SLC35B3Q9H1N7 401 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 TNFSF18Q9UNG2 199 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 PRELID1Q9Y255 219 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 GOLT1BQ9Y3E0 138 aa12.56□□□□□ -0.4
SHKBP1-203ENST00000594298 BORCS7-ASMTA0A0B4J1R7 106 aa12.55□□□□□ -0.4
SHKBP1-203ENST00000594298 A0A1W2PPV4 95 aa12.55□□□□□ -0.4
SHKBP1-203ENST00000594298 SLC17A3O00476 420 aa12.55□□□□□ -0.4
SHKBP1-203ENST00000594298 NBEAP1P0C6P0 100 aa12.55□□□□□ -0.4
SHKBP1-203ENST00000594298 M6PRP20645 277 aa12.55□□□□□ -0.4
SHKBP1-203ENST00000594298 ZNF705AQ6ZN79 300 aaPredicted RBP12.55□□□□□ -0.4
SHKBP1-203ENST00000594298 ZNF767PQ75MW2 155 aa12.55□□□□□ -0.4
SHKBP1-203ENST00000594298 FAM167A-AS1Q96KT0 104 aa12.55□□□□□ -0.4
SHKBP1-203ENST00000594298 AAMDCQ9H7C9 122 aa12.55□□□□□ -0.4
SHKBP1-203ENST00000594298 AGRNO00468 2067 aa12.55□□□□□ -0.4
SHKBP1-203ENST00000594298 SMIM9A6NGZ8 99 aa12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 OR7C2O60412 319 aa12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 ZNF705DP0CH99 300 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 ZNF705BP0CI00 300 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 PYYP10082 97 aa12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 KHDC3LQ587J8 217 aa12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 AMTNQ6UX39 209 aa12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 HSD17B11Q8NBQ5 300 aa12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 BLNKQ8WV28 456 aa12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 RNF141Q8WVD5 230 aa12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 PSMG3Q9BT73 122 aaPredicted RBP12.54□□□□□ -0.4
SHKBP1-203ENST00000594298 TMEM189A5PLL7 270 aa12.53□□□□□ -0.4
SHKBP1-203ENST00000594298 ZNF705FA8MVS1 300 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-203ENST00000594298 TAAR5O14804 337 aa12.53□□□□□ -0.4
SHKBP1-203ENST00000594298 MBP02144 154 aa12.53□□□□□ -0.4
SHKBP1-203ENST00000594298 MED14OSP0DP75 135 aa12.53□□□□□ -0.4
SHKBP1-203ENST00000594298 SERF2P84101 59 aa12.53□□□□□ -0.4
SHKBP1-203ENST00000594298 OR2G3Q8NGZ4 309 aa12.53□□□□□ -0.4
SHKBP1-203ENST00000594298 GNPNAT1Q96EK6 184 aaPredicted RBP12.53□□□□□ -0.4
SHKBP1-203ENST00000594298 IGF2BP2-AS1Q96M15 143 aa12.53□□□□□ -0.4
SHKBP1-203ENST00000594298 RNF222A6NCQ9 220 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 BOLA2-SMG1P6H3BVE0 249 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 RTL8CO15255 209 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 INSP01308 110 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 SPART-AS1P0CW21 52 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 TSPOP30536 169 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 LGALS9BQ3B8N2 356 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 OR10G4Q8NGN3 311 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 OR10G9Q8NGN4 311 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 OR10G7Q8NGN6 311 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 TMEM208Q9BTX3 173 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 DNAH17Q9UFH2 4485 aa12.52□□□□□ -0.41
SHKBP1-203ENST00000594298 IGHV3OR16-12A0A075B7B8 117 aa12.51□□□□□ -0.41
SHKBP1-203ENST00000594298 PRSS29PA6NIE9 313 aa12.51□□□□□ -0.41
SHKBP1-203ENST00000594298 ARPC5O15511 151 aa12.51□□□□□ -0.41
SHKBP1-203ENST00000594298 NDUFB4O95168 129 aa12.51□□□□□ -0.41
SHKBP1-203ENST00000594298 ATP6V0CP27449 155 aa12.51□□□□□ -0.41
SHKBP1-203ENST00000594298 SPINK13Q1W4C9 94 aa12.51□□□□□ -0.41
SHKBP1-203ENST00000594298 LYPD1Q8N2G4 141 aa12.51□□□□□ -0.41
SHKBP1-203ENST00000594298 FXYD5Q96DB9 178 aa12.51□□□□□ -0.41
SHKBP1-203ENST00000594298 FAM210BQ96KR6 192 aa12.51□□□□□ -0.41
SHKBP1-203ENST00000594298 HBE1P02100 147 aa12.5□□□□□ -0.41
SHKBP1-203ENST00000594298 OR10J4P0C629 311 aa12.5□□□□□ -0.41
SHKBP1-203ENST00000594298 RAB2AP61019 212 aa12.5□□□□□ -0.41
SHKBP1-203ENST00000594298 UBE2L3P68036 154 aaKnown RBP12.5□□□□□ -0.41
SHKBP1-203ENST00000594298 FAM122CQ6P4D5 195 aa12.5□□□□□ -0.41
SHKBP1-203ENST00000594298 PQLC2Q6ZP29 291 aa12.5□□□□□ -0.41
SHKBP1-203ENST00000594298 RFNGQ9Y644 331 aa12.5□□□□□ -0.41
SHKBP1-203ENST00000594298 PKHD1P08F94 4074 aa12.5□□□□□ -0.41
SHKBP1-203ENST00000594298 DYNC1H1Q14204 4646 aaKnown RBP12.5□□□□□ -0.41
SHKBP1-203ENST00000594298 TEX48A0A1B0GUV7 120 aa12.49□□□□□ -0.41
SHKBP1-203ENST00000594298 PRAC2D3DTV9 90 aa12.49□□□□□ -0.41
SHKBP1-203ENST00000594298 G3V3Q6 166 aa12.49□□□□□ -0.41
SHKBP1-203ENST00000594298 M0R2Z0 102 aa12.49□□□□□ -0.41
SHKBP1-203ENST00000594298 CDKN1BP46527 198 aa12.49□□□□□ -0.41
SHKBP1-203ENST00000594298 ICAM4Q14773 271 aa12.49□□□□□ -0.41
SHKBP1-203ENST00000594298 RPL7L1Q6DKI1 246 aaKnown RBP12.49□□□□□ -0.41
SHKBP1-203ENST00000594298 DNAH11Q96DT5 4516 aa12.48□□□□□ -0.41
SHKBP1-203ENST00000594298 M0R2N4 97 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms