RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TMEM189A5PLL7 270 aa7.29□□□□□ -1.24
BRCA1-227ENST00000591849 ZNF253O75346 499 aa7.29□□□□□ -1.24
BRCA1-227ENST00000591849 OR10J4P0C629 311 aa7.29□□□□□ -1.24
BRCA1-227ENST00000591849 RRN3P1Q2M238 152 aa7.29□□□□□ -1.24
BRCA1-227ENST00000591849 HSD17B11Q8NBQ5 300 aa7.29□□□□□ -1.24
BRCA1-227ENST00000591849 RNF141Q8WVD5 230 aa7.29□□□□□ -1.24
BRCA1-227ENST00000591849 SAT2Q96F10 170 aaPredicted RBP7.29□□□□□ -1.24
BRCA1-227ENST00000591849 AQP10Q96PS8 301 aa7.29□□□□□ -1.24
BRCA1-227ENST00000591849 LINC01587Q99440 93 aa7.29□□□□□ -1.24
BRCA1-227ENST00000591849 NEU1Q99519 415 aa7.29□□□□□ -1.24
BRCA1-227ENST00000591849 DYNC2H1Q8NCM8 4307 aaKnown RBP7.28□□□□□ -1.24
BRCA1-227ENST00000591849 TRAV12-2A0A075B6T6 113 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 PRAC2D3DTV9 90 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 SPART-AS1P0CW21 52 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 M6PRP20645 277 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 CSN1S1P47710 185 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 UBE2L3P68036 154 aaKnown RBP7.28□□□□□ -1.24
BRCA1-227ENST00000591849 PDE6HQ13956 83 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 ICAM4Q14773 271 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 KHDC3LQ587J8 217 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 Q5BKY6 102 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 FAM122CQ6P4D5 195 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 AMTNQ6UX39 209 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 ZNF705AQ6ZN79 300 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-227ENST00000591849 BAP18Q8IXM2 172 aa7.28□□□□□ -1.24
BRCA1-227ENST00000591849 MRPL53Q96EL3 112 aaKnown RBP7.28□□□□□ -1.24
BRCA1-227ENST00000591849 LCE6AA0A183 80 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 LOC102723971A0A1B0GUV8 181 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 A8MTW9 85 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 ZNF705GA8MUZ8 300 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-227ENST00000591849 C11orf94C9JXX5 98 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 J3KRW8 73 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 HTN1P15515 57 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 LEPP41159 167 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 CDKN1BP46527 198 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 C1orf158Q8N1D5 194 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 EXOC3-AS1Q8N2X6 119 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 RPP25LQ8N5L8 163 aaKnown RBP7.27□□□□□ -1.25
BRCA1-227ENST00000591849 OR10G4Q8NGN3 311 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 OR10G9Q8NGN4 311 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 OR10G7Q8NGN6 311 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 FAM167A-AS1Q96KT0 104 aa7.27□□□□□ -1.25
BRCA1-227ENST00000591849 TEX48A0A1B0GUV7 120 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 M0R3E3 92 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 NDUFB4O95168 129 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 MBP02144 154 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 RAB2AP61019 212 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 RANP62826 216 aaKnown RBP7.26□□□□□ -1.25
BRCA1-227ENST00000591849 ERCC8Q13216 396 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 FAM74A1Q5RGS3 127 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 ZNF767PQ75MW2 155 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 TMEM256Q8N2U0 113 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 C2CD4CQ8TF44 421 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 GNPNAT1Q96EK6 184 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-227ENST00000591849 LINC00477Q96M19 166 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 TNFSF18Q9UNG2 199 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 SACSQ9NZJ4 4579 aa7.26□□□□□ -1.25
BRCA1-227ENST00000591849 TRAV10A0A0B4J240 114 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 IGLL5B9A064 214 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 ARPC5O15511 151 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 EIF3GO75821 320 aaKnown RBP eCLIP7.25□□□□□ -1.25
BRCA1-227ENST00000591849 CT45A10P0DMU9 189 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 ATP6V0CP27449 155 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 CDC34P49427 236 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-227ENST00000591849 TMEM78Q5T7P6 136 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 RPL7L1Q6DKI1 246 aaKnown RBP7.25□□□□□ -1.25
BRCA1-227ENST00000591849 PQLC2Q6ZP29 291 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 CCDC28AQ8IWP9 274 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 CMTM2Q8TAZ6 248 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 FXYD5Q96DB9 178 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 HYLS1Q96M11 299 aa7.25□□□□□ -1.25
BRCA1-227ENST00000591849 PSMG3Q9BT73 122 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-227ENST00000591849 YTHDF2Q9Y5A9 579 aaKnown RBP7.25□□□□□ -1.25
BRCA1-227ENST00000591849 CSMD3Q7Z407 3707 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 NPIPB6E9PJ23 425 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 TAAR5O14804 337 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 HMGB3O15347 200 aaKnown RBP7.24□□□□□ -1.25
BRCA1-227ENST00000591849 CRXO43186 299 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-227ENST00000591849 LY6G6CO95867 125 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 TAS2R60P59551 318 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 SERF2P84101 59 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 C12orf74Q32Q52 190 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 FAM222AQ5U5X8 452 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 Q6ZTC4 211 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 IQCF2Q8IXL9 164 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 LYPD1Q8N2G4 141 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 OR2G3Q8NGZ4 309 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 RXFP4Q8TDU9 374 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 PHYHIPLQ96FC7 376 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 C20orf144Q9BQM9 153 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 NIPSNAP3BQ9BS92 247 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 ACTR3CQ9C0K3 210 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-227ENST00000591849 Q9H3A6 140 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 RPH3ALQ9UNE2 315 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 CELA1Q9UNI1 258 aa7.24□□□□□ -1.25
BRCA1-227ENST00000591849 EPPK1P58107 5090 aaKnown RBP7.23□□□□□ -1.25
BRCA1-227ENST00000591849 IGKV2-40A0A087WW87 121 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-227ENST00000591849 DEFB131BA0A096LNP1 70 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 TRAV12-3A0A0B4J271 114 aa7.23□□□□□ -1.25
BRCA1-227ENST00000591849 RNF222A6NCQ9 220 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms