RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 HLA-DMBP28068 263 aa8.66□□□□□ -1.02
SMAD4-205ENST00000588745 SRSF2Q01130 221 aaKnown RBP8.66□□□□□ -1.02
SMAD4-205ENST00000588745 IGFL4Q6B9Z1 124 aa8.66□□□□□ -1.02
SMAD4-205ENST00000588745 HIST2H2BDQ6DRA6 164 aa8.66□□□□□ -1.02
SMAD4-205ENST00000588745 BAGE2Q86Y30 109 aa8.66□□□□□ -1.02
SMAD4-205ENST00000588745 SMIM12Q96EX1 92 aa8.66□□□□□ -1.02
SMAD4-205ENST00000588745 CITED2Q99967 270 aaPredicted RBP8.66□□□□□ -1.02
SMAD4-205ENST00000588745 TUBA4BQ9H853 241 aa8.66□□□□□ -1.02
SMAD4-205ENST00000588745 NRN1Q9NPD7 142 aa8.66□□□□□ -1.02
SMAD4-205ENST00000588745 TMEM242Q9NWH2 141 aa8.66□□□□□ -1.02
SMAD4-205ENST00000588745 CLEC5AQ9NY25 188 aa8.66□□□□□ -1.02
SMAD4-205ENST00000588745 NF1P21359 2839 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 SETXQ7Z333 2677 aaKnown RBP8.65□□□□□ -1.02
SMAD4-205ENST00000588745 TRAV8-1A0A0A6YYK1 113 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 CXorf65A6NEN9 183 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 C2orf70A6NJV1 201 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 H7BYZ3 331 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 SOCS3O14543 225 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 LTAP01374 205 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 IGLV2-11P01706 119 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 FHL3Q13643 280 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 PSG3Q16557 428 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 TCF24Q7RTU0 167 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 RNF182Q8N6D2 247 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 NHLRC2Q8NBF2 726 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 ANAPC16Q96DE5 110 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 MRPL53Q96EL3 112 aaKnown RBP8.65□□□□□ -1.02
SMAD4-205ENST00000588745 C16orf92Q96LL3 132 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 SGK494Q96LW2 274 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 DUX3Q96PT4 197 aa8.65□□□□□ -1.02
SMAD4-205ENST00000588745 A0A1B0GUS0 222 aa8.64□□□□□ -1.03
SMAD4-205ENST00000588745 A0A1W2PRX2 142 aa8.64□□□□□ -1.03
SMAD4-205ENST00000588745 M0QZ24 198 aa8.64□□□□□ -1.03
SMAD4-205ENST00000588745 PPP1R2P9O14990 202 aa8.64□□□□□ -1.03
SMAD4-205ENST00000588745 GCGP01275 180 aa8.64□□□□□ -1.03
SMAD4-205ENST00000588745 MGST1P10620 155 aaKnown RBP8.64□□□□□ -1.03
SMAD4-205ENST00000588745 FLI1Q01543 452 aaPredicted RBP8.64□□□□□ -1.03
SMAD4-205ENST00000588745 OR5I1Q13606 314 aa8.64□□□□□ -1.03
SMAD4-205ENST00000588745 C15orf54Q8N8G6 183 aa8.64□□□□□ -1.03
SMAD4-205ENST00000588745 SFRP2Q96HF1 295 aa8.64□□□□□ -1.03
SMAD4-205ENST00000588745 RAX2Q96IS3 184 aa8.64□□□□□ -1.03
SMAD4-205ENST00000588745 PEMTQ9UBM1 199 aa8.64□□□□□ -1.03
SMAD4-205ENST00000588745 IGKV2-40A0A087WW87 121 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-205ENST00000588745 FBLL1A6NHQ2 334 aaKnown RBP8.63□□□□□ -1.03
SMAD4-205ENST00000588745 ZNF705FA8MVS1 300 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-205ENST00000588745 IGKV2D-40P01614 121 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-205ENST00000588745 CBLN1P23435 193 aa8.63□□□□□ -1.03
SMAD4-205ENST00000588745 RPL11P62913 178 aaKnown RBP8.63□□□□□ -1.03
SMAD4-205ENST00000588745 SAMD13Q5VXD3 122 aa8.63□□□□□ -1.03
SMAD4-205ENST00000588745 LCN12Q6JVE5 192 aa8.63□□□□□ -1.03
SMAD4-205ENST00000588745 PRNTQ86SH4 94 aa8.63□□□□□ -1.03
SMAD4-205ENST00000588745 OR10G8Q8NGN5 311 aa8.63□□□□□ -1.03
SMAD4-205ENST00000588745 OR9G4Q8NGQ1 327 aa8.63□□□□□ -1.03
SMAD4-205ENST00000588745 DLX4Q92988 240 aaPredicted RBP8.63□□□□□ -1.03
SMAD4-205ENST00000588745 MLST8Q9BVC4 326 aa8.63□□□□□ -1.03
SMAD4-205ENST00000588745 PSG8Q9UQ74 426 aa8.63□□□□□ -1.03
SMAD4-205ENST00000588745 PRB4P10163 310 aaPredicted RBP8.62□□□□□ -1.03
SMAD4-205ENST00000588745 FOLR2P14207 255 aa8.62□□□□□ -1.03
SMAD4-205ENST00000588745 TMEM183AQ8IXX5 376 aa8.62□□□□□ -1.03
SMAD4-205ENST00000588745 YPEL4Q96NS1 127 aa8.62□□□□□ -1.03
SMAD4-205ENST00000588745 OSTCQ9NRP0 149 aa8.62□□□□□ -1.03
SMAD4-205ENST00000588745 MLXQ9UH92 298 aa8.62□□□□□ -1.03
SMAD4-205ENST00000588745 ZFP30Q9Y2G7 519 aa8.62□□□□□ -1.03
SMAD4-205ENST00000588745 SELENOKQ9Y6D0 94 aa8.62□□□□□ -1.03
SMAD4-205ENST00000588745 IGKV3-7A0A075B6H7 116 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 RBAKDNA6NC62 111 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 COLCA2A8K830 154 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 ADARB2-AS1A8MUL3 147 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 PRAC2D3DTV9 90 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 CCL24O00175 119 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 ERVFC1-1P60608 527 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 IBA57Q5T440 356 aaKnown RBP8.61□□□□□ -1.03
SMAD4-205ENST00000588745 ADAMTSL5Q6ZMM2 481 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 FAM231DQ6ZW35 169 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 C20orf173Q96LM9 149 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 BIN3Q9NQY0 253 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 C2CD3Q4AC94 2353 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 KRTAP10-3P60369 221 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 FOXL1Q12952 345 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 ELOBQ15370 118 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 PRR27Q6MZM9 219 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 FAM24BQ8N5W8 94 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.61□□□□□ -1.03
SMAD4-205ENST00000588745 ZNF738Q8NE65 137 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 DCANP1Q8TF63 244 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 VGLL1Q99990 258 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 RNASE7Q9H1E1 156 aaKnown RBP8.61□□□□□ -1.03
SMAD4-205ENST00000588745 MS4A6AQ9H2W1 248 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 ZNF492Q9P255 531 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 URGCP-MRPS24S4R325 110 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 V9GYV3 84 aa8.61□□□□□ -1.03
SMAD4-205ENST00000588745 CSN3P07498 182 aa8.6□□□□□ -1.03
SMAD4-205ENST00000588745 S100PP25815 95 aa8.6□□□□□ -1.03
SMAD4-205ENST00000588745 ID1P41134 155 aa8.6□□□□□ -1.03
SMAD4-205ENST00000588745 KCNIP4Q6PIL6 250 aa8.6□□□□□ -1.03
SMAD4-205ENST00000588745 NDUFA11Q86Y39 141 aa8.6□□□□□ -1.03
SMAD4-205ENST00000588745 GBGT1Q8N5D6 347 aa8.6□□□□□ -1.03
SMAD4-205ENST00000588745 Q8TAT8 98 aa8.6□□□□□ -1.03
SMAD4-205ENST00000588745 ZC2HC1AQ96GY0 325 aa8.6□□□□□ -1.03
SMAD4-205ENST00000588745 IMMP2LQ96T52 175 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms