RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 HSPB11Q9Y547 144 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 IGKV1D-13A0A0B4J2D9 117 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 MUC21A0A0G2JKD1 596 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 CORTO00230 105 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 SULT1C2O00338 296 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 TNFSF12O43508 249 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 ARL6IP5O75915 188 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 FCGR3AP08637 254 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 SEC11BP0C7V7 166 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 IGLC1P0CG04 106 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 IGKV1-13P0DP09 117 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 SEC61BP60468 96 aaKnown RBP4.08□□□□□ -1.76
TPM4-210ENST00000588507 SUPT4H1P63272 117 aaKnown RBP4.08□□□□□ -1.76
TPM4-210ENST00000588507 MLANAQ16655 118 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 MAJINQ3KP22 176 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 C1orf194Q5T5A4 169 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 GFI1BQ5VTD9 330 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 SLC51BQ86UW2 128 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 ACBD7Q8N6N7 88 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 STPG4Q8N801 248 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 FER1L6-AS1Q8NA97 138 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 ASB13Q8WXK3 278 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 MAFIPQ8WZ33 124 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 ARHGAP5-AS1Q96IT6 56 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 SOSTQ9BQB4 213 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 PECRQ9BY49 303 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 MIXL1Q9H2W2 232 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 GPN1Q9HCN4 374 aaPredicted RBP4.08□□□□□ -1.76
TPM4-210ENST00000588507 MRPL16Q9NX20 251 aaKnown RBP4.08□□□□□ -1.76
TPM4-210ENST00000588507 COMMD9Q9P000 198 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 SCP2D1Q9UJQ7 156 aa4.08□□□□□ -1.76
TPM4-210ENST00000588507 KRBOX1C9JBD0 128 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 J3QRE1 110 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 PDCD5O14737 125 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 PLA2G10O15496 165 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 SSNA1O43805 119 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 HPGDSO60760 199 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 TSC22D2O75157 780 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 SFTA3P0C7M3 94 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 NFYAP23511 347 aaPredicted RBP4.07□□□□□ -1.76
TPM4-210ENST00000588507 FAUP35544 74 aaKnown RBP4.07□□□□□ -1.76
TPM4-210ENST00000588507 SNCAP37840 140 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 OPRK1P41145 380 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 ETV1P50549 477 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 TMEM50BP56557 158 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 MRPS10P82664 201 aaKnown RBP4.07□□□□□ -1.76
TPM4-210ENST00000588507 CLLU1Q5K131 121 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 ATRAIDQ6UW56 229 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 TEX261Q6UWH6 196 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 OR8I2Q8N0Y5 310 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 TOMM5Q8N4H5 51 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 ZBTB34Q8NCN2 500 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 ZNF738Q8NE65 137 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 OR8A1Q8NGG7 326 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 OR51G1Q8NGK1 321 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 PHYHIPQ92561 330 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 DIRC1Q969H9 104 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 UBE2WQ96B02 151 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 ZNF479Q96JC4 524 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 RETNLBQ9BQ08 111 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 EXTL2Q9UBQ6 330 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 ELF5Q9UKW6 265 aaPredicted RBP4.07□□□□□ -1.76
TPM4-210ENST00000588507 U3KQ87 197 aa4.07□□□□□ -1.76
TPM4-210ENST00000588507 IGHV1OR15-1A0A075B7D0 117 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 C7orf66A4D0T2 115 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 CTDSPLO15194 276 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 TCRBP04435 133 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 H2AFB2P0C5Z0 115 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 CFC1P0CG37 223 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 RD3LP0DJH9 198 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 CT45A10P0DMU9 189 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 OR10J1P30954 320 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 TCL1AP56279 114 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 RPS25P62851 125 aaKnown RBP4.06□□□□□ -1.76
TPM4-210ENST00000588507 FABP5Q01469 135 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 CATR1Q13166 79 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 IDNKQ5T6J7 187 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 IGFL4Q6B9Z1 124 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 OR8G2PQ6IF36 304 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 LHFPL3Q86UP9 236 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 URM1Q9BTM9 101 aaKnown RBP4.06□□□□□ -1.76
TPM4-210ENST00000588507 LPAR5Q9H1C0 372 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 CCL28Q9NRJ3 127 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 MED9Q9NWA0 146 aa4.06□□□□□ -1.76
TPM4-210ENST00000588507 KMT2DO14686 5537 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 TRAV1-2A0A0B4J238 106 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 LOC105371267A0A1B0GV96 52 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 CD1AP06126 327 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 OR10J4P0C629 311 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 LIMS3P0CW19 117 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 LIMS4P0CW20 117 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 RAB3BP20337 219 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 MAPK3P27361 379 aaPredicted RBP4.05□□□□□ -1.76
TPM4-210ENST00000588507 SUB1P53999 127 aaKnown RBP eCLIP4.05□□□□□ -1.76
TPM4-210ENST00000588507 RAP2BP61225 183 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 RAB11BQ15907 218 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 SMUG1Q53HV7 270 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 COMMD7Q86VX2 200 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 C9orf62Q8N4C0 152 aa4.05□□□□□ -1.76
TPM4-210ENST00000588507 FAM89BQ8N5H3 189 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms