RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 CEP250Q9BV73 2442 aa10.52□□□□□ -0.72
RNF43-208ENST00000584437 TMEM219Q86XT9 240 aa10.52□□□□□ -0.72
RNF43-208ENST00000584437 CEND1Q8N111 149 aa10.52□□□□□ -0.72
RNF43-208ENST00000584437 DEFB104AQ8WTQ1 72 aa10.52□□□□□ -0.72
RNF43-208ENST00000584437 SLX1AQ9BQ83 275 aa10.52□□□□□ -0.72
RNF43-208ENST00000584437 MDS2Q8NDY4 140 aa10.52□□□□□ -0.73
RNF43-208ENST00000584437 ETV2O00321 342 aaPredicted RBP10.52□□□□□ -0.73
RNF43-208ENST00000584437 SS18Q15532 418 aa10.52□□□□□ -0.73
RNF43-208ENST00000584437 DAZ1Q9NQZ3 744 aaKnown RBP10.52□□□□□ -0.73
RNF43-208ENST00000584437 PRO1854Q9UHT4 67 aa10.52□□□□□ -0.73
RNF43-208ENST00000584437 MBD3L4A6NDZ8 208 aaPredicted RBP10.52□□□□□ -0.73
RNF43-208ENST00000584437 MBD3L3A6NE82 208 aaPredicted RBP10.52□□□□□ -0.73
RNF43-208ENST00000584437 MBD3L5A6NJ08 208 aaPredicted RBP10.52□□□□□ -0.73
RNF43-208ENST00000584437 CSRP1P21291 193 aaKnown RBP10.52□□□□□ -0.73
RNF43-208ENST00000584437 MBD3L2Q8NHZ7 208 aaPredicted RBP10.52□□□□□ -0.73
RNF43-208ENST00000584437 LYPD6BQ8NI32 183 aa10.52□□□□□ -0.73
RNF43-208ENST00000584437 KLF2Q9Y5W3 355 aaPredicted RBP10.52□□□□□ -0.73
RNF43-208ENST00000584437 ABCA7Q8IZY2 2146 aa10.52□□□□□ -0.73
RNF43-208ENST00000584437 SPACA3Q8IXA5 215 aa10.51□□□□□ -0.73
RNF43-208ENST00000584437 HLA-DRB4P13762 266 aa10.51□□□□□ -0.73
RNF43-208ENST00000584437 HLA-DRB4X5D2U9 266 aa10.51□□□□□ -0.73
RNF43-208ENST00000584437 FGF6P10767 208 aa10.51□□□□□ -0.73
RNF43-208ENST00000584437 Q0VFX4 171 aa10.51□□□□□ -0.73
RNF43-208ENST00000584437 C3orf36Q3SXR2 165 aa10.51□□□□□ -0.73
RNF43-208ENST00000584437 HS3ST6Q96QI5 342 aa10.51□□□□□ -0.73
RNF43-208ENST00000584437 SIGLEC8Q9NYZ4 499 aa10.51□□□□□ -0.73
RNF43-208ENST00000584437 F8VRH5 84 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 IGKV1-39P01597 117 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 IGKV1D-39P04432 117 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 TET1Q8NFU7 2136 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 ZNF114Q8NC26 417 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 C8orf49Q96NF6 230 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 I3L3M4 83 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 COA6Q5JTJ3 125 aaKnown RBP10.5□□□□□ -0.73
RNF43-208ENST00000584437 KIR2DL5BA0A0G2JN68 375 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 KIR2DL5BA0A0G2JPC4 375 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 INS-IGF2F8WCM5 200 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 CDKN1BP46527 198 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 IL17RELQ6ZVW7 336 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 KIR2DL5AQ8N109 375 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 UBL5Q9BZL1 73 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 H3BUX3 64 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 IGHG3P01860 377 aa10.5□□□□□ -0.73
RNF43-208ENST00000584437 FAM110DQ8TAY7 271 aaPredicted RBP10.5□□□□□ -0.73
RNF43-208ENST00000584437 IL15RAQ13261 267 aa10.49□□□□□ -0.73
RNF43-208ENST00000584437 PRR25Q96S07 402 aa10.49□□□□□ -0.73
RNF43-208ENST00000584437 PRSS57Q6UWY2 283 aa10.49□□□□□ -0.73
RNF43-208ENST00000584437 PRDM6Q9NQX0 595 aa10.49□□□□□ -0.73
RNF43-208ENST00000584437 CDK2AP2O75956 126 aa10.49□□□□□ -0.73
RNF43-208ENST00000584437 AZU1P20160 251 aa10.49□□□□□ -0.73
RNF43-208ENST00000584437 HLA-DMBP28068 263 aa10.49□□□□□ -0.73
RNF43-208ENST00000584437 CITED1Q99966 193 aa10.49□□□□□ -0.73
RNF43-208ENST00000584437 MRPL35Q9NZE8 188 aaKnown RBP10.49□□□□□ -0.73
RNF43-208ENST00000584437 ZNF833PQ6ZTB9 187 aa10.48□□□□□ -0.73
RNF43-208ENST00000584437 WIPF2Q8TF74 440 aaPredicted RBP10.48□□□□□ -0.73
RNF43-208ENST00000584437 IGLC7A0M8Q6 106 aa10.48□□□□□ -0.73
RNF43-208ENST00000584437 PIP4P2Q8N4L2 257 aa10.48□□□□□ -0.73
RNF43-208ENST00000584437 PYGO2Q9BRQ0 406 aa10.48□□□□□ -0.73
RNF43-208ENST00000584437 IGHV3-53P01767 116 aa10.48□□□□□ -0.73
RNF43-208ENST00000584437 KLF5Q13887 457 aaPredicted RBP10.48□□□□□ -0.73
RNF43-208ENST00000584437 SMIM2Q9BVW6 85 aa10.48□□□□□ -0.73
RNF43-208ENST00000584437 SAP30O75446 220 aa10.47□□□□□ -0.73
RNF43-208ENST00000584437 TRACP01848 142 aa10.47□□□□□ -0.73
RNF43-208ENST00000584437 LYPD2Q6UXB3 125 aa10.47□□□□□ -0.73
RNF43-208ENST00000584437 SDHAF1A6NFY7 115 aa10.47□□□□□ -0.73
RNF43-208ENST00000584437 B4DSR2 109 aa10.47□□□□□ -0.73
RNF43-208ENST00000584437 H3BMG7 143 aa10.47□□□□□ -0.73
RNF43-208ENST00000584437 H3BRN7 92 aa10.47□□□□□ -0.73
RNF43-208ENST00000584437 HAPLN4Q86UW8 402 aa10.47□□□□□ -0.73
RNF43-208ENST00000584437 NDUFA12Q9UI09 145 aa10.47□□□□□ -0.73
RNF43-208ENST00000584437 GAGE12JA6NER3 117 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 GAGE7O76087 117 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 GAGE12FP0CL80 117 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 GAGE12GP0CL81 117 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 GAGE12IP0CL82 117 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 GATA4P43694 442 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 GAGE4Q13068 117 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 K7EM74 188 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 NPYP01303 97 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 CD59P13987 128 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 VWC2Q2TAL6 325 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 MORN5Q5VZ52 161 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 Q8TCH9 128 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 C20orf78Q9BR46 151 aa10.46□□□□□ -0.73
RNF43-208ENST00000584437 OVOL3O00110 214 aa10.46□□□□□ -0.74
RNF43-208ENST00000584437 DEFB125Q8N687 156 aa10.46□□□□□ -0.74
RNF43-208ENST00000584437 KIAA2026Q5HYC2 2103 aa10.46□□□□□ -0.74
RNF43-208ENST00000584437 C12orf74Q32Q52 190 aa10.45□□□□□ -0.74
RNF43-208ENST00000584437 LINC00311Q8N616 119 aa10.45□□□□□ -0.74
RNF43-208ENST00000584437 THAP8Q8NA92 274 aa10.45□□□□□ -0.74
RNF43-208ENST00000584437 INTS1Q8N201 2190 aaKnown RBP10.45□□□□□ -0.74
RNF43-208ENST00000584437 SRSF2Q01130 221 aaKnown RBP10.45□□□□□ -0.74
RNF43-208ENST00000584437 CACNA1EQ15878 2313 aa10.45□□□□□ -0.74
RNF43-208ENST00000584437 DOCK11Q5JSL3 2073 aa10.45□□□□□ -0.74
RNF43-208ENST00000584437 DKK1O94907 266 aa10.45□□□□□ -0.74
RNF43-208ENST00000584437 RBMY1FQ15415 496 aaKnown RBP10.45□□□□□ -0.74
RNF43-208ENST00000584437 NDUFS7O75251 213 aa10.45□□□□□ -0.74
RNF43-208ENST00000584437 MED12Q93074 2177 aa10.45□□□□□ -0.74
RNF43-208ENST00000584437 FXYD5Q96DB9 178 aa10.44□□□□□ -0.74
RNF43-208ENST00000584437 CARD19Q96LW7 228 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms