RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 FREM3P0C091 2139 aa0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 TRDV1A0A1B0GX56 115 aa0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 C5orf58C9J3I9 102 aa0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 PGRMC1O00264 195 aaKnown RBP0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 FABP2P12104 132 aa0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 MRPS36P82909 103 aaKnown RBP0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 EIF3IQ13347 325 aaKnown RBP0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 AMELYQ99218 206 aa0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 NAT8BQ9UHF3 227 aa0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 TPRKBQ9Y3C4 175 aa0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 RTL9Q8NET4 1388 aa0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 TECPR2O15040 1411 aa0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 TRAPPC8Q9Y2L5 1435 aa0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 N4BP2Q86UW6 1770 aaPredicted RBP0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 MYO18AQ92614 2054 aaKnown RBP0.77□□□□□ -2.29
PPP4R1-227ENST00000583988 ALPK3Q96L96 1907 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 PLXNA4Q9HCM2 1894 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 PBRM1Q86U86 1689 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 KIAA1107Q9UPP5 1409 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 NCR3O14931 201 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 IGLV1-51P01701 117 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 SDC2P34741 201 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 TOMM20LQ6UXN7 152 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 Q8TAT8 98 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 SKA2Q8WVK7 121 aaPredicted RBP0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 DDA1Q9BW61 102 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 SMPXQ9UHP9 88 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 RNF11Q9Y3C5 154 aa0.76□□□□□ -2.29
PPP4R1-227ENST00000583988 CECR2Q9BXF3 1484 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 UNC13CQ8NB66 2214 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 A0A1W2PRE2 83 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 B4DSR2 109 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 TSTD3H0UI37 97 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 GABARAPH6UMI1 98 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 FABP4P15090 132 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 S100GP29377 79 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 S100A11P31949 105 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 SRP9P49458 86 aaKnown RBP0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 VMA21Q3ZAQ7 101 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 SPRNQ5BIV9 151 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 SAMD13Q5VXD3 122 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 TMEM14EPQ6UXP3 125 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 OR9Q1Q8NGQ5 310 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 OR5H6Q8NGV6 325 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 PSMF1Q92530 271 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 OR4C12Q96R67 309 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 LXNQ9BS40 222 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 EFCAB11Q9BUY7 163 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 CST11Q9H112 138 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 OTORQ9NRC9 128 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 PTPRFP10586 1907 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 TENM3Q9P273 2699 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 MGAMO43451 1857 aa0.75□□□□□ -2.29
PPP4R1-227ENST00000583988 RFX7Q2KHR2 1363 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 NUP210Q8TEM1 1887 aaPredicted RBP0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 SIP14410 1827 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 C9orf170A2RU37 121 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 C5orf67F2Z3F1 127 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 JMJD7-PLA2G4BH0Y9G9 81 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 KLF7O75840 302 aaPredicted RBP0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 TPT1P13693 172 aaKnown RBP0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 LSM3P62310 102 aaKnown RBP0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 KRTAP26-1Q6PEX3 210 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 OR5AK2Q8NH90 309 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 GRPEL2Q8TAA5 225 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 THEM6Q8WUY1 208 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 PRELID3AQ96N28 172 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 LRTM1Q9HBL6 345 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 ASB4Q9Y574 426 aa0.74□□□□□ -2.29
PPP4R1-227ENST00000583988 ASCC3Q8N3C0 2202 aaKnown RBP0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 MED12Q93074 2177 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 GNG14A0A1W2PPG7 69 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 PPYP01298 95 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 TRACP01848 142 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 DIAPH2-AS1Q14236 149 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 SPATA45Q537H7 98 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 TMEM128Q5BJH2 165 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 CASC2Q6XLA1 102 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 LINC00299Q6ZSB3 139 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 LINC00305Q7Z4B0 112 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 TMEM35BQ8NCS4 154 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 OR10AC1Q8NH08 325 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 RMND5BQ96G75 393 aaPredicted RBP0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 AP1S3Q96PC3 154 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 WFDC10AQ9H1F0 79 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 SPANXA1Q9NS26 97 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 MED31Q9Y3C7 131 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 HSPB11Q9Y547 144 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 CASP8AP2Q9UKL3 1982 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 FRMPD1Q5SYB0 1578 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 ANKRD31Q8N7Z5 1873 aa0.73□□□□□ -2.29
PPP4R1-227ENST00000583988 COL24A1Q17RW2 1714 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 E9PCH4 1651 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 TRAV13-1A0A0B4J241 112 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 TRBV27A0A0K0K1C4 114 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 ARL5CA6NH57 179 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 H0YJX3 145 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 H7BYZ3 331 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 IGLV3-1P01715 115 aa0.72□□□□□ -2.29
PPP4R1-227ENST00000583988 SAA1P0DJI8 122 aaPredicted RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms