RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 TREM1Q9NP99 234 aa6.96□□□□□ -1.3
CASC3-209ENST00000583902 EPDR1Q9UM22 224 aa6.96□□□□□ -1.3
CASC3-209ENST00000583902 KLF12Q9Y4X4 402 aa6.96□□□□□ -1.3
CASC3-209ENST00000583902 SMAD5-AS1Q9Y6J3 95 aa6.96□□□□□ -1.3
CASC3-209ENST00000583902 LY96Q9Y6Y9 160 aa6.96□□□□□ -1.3
CASC3-209ENST00000583902 TMEM218A2RU14 115 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 C9JCJ5 164 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 K7EQG2 157 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 SOCS3O14543 225 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 SAP30O75446 220 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 IGLV1-51P01701 117 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 SRP19P09132 144 aaKnown RBP6.95□□□□□ -1.3
CASC3-209ENST00000583902 CNN1P51911 297 aaKnown RBP6.95□□□□□ -1.3
CASC3-209ENST00000583902 UBE2G2P60604 165 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 PNRC1Q12796 327 aaPredicted RBP6.95□□□□□ -1.3
CASC3-209ENST00000583902 PSG3Q16557 428 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 CYB561D1Q8N8Q1 229 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 TMEM75Q8N9X5 138 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 DCANP1Q8TF63 244 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 RARRES2Q99969 163 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 MS4A6AQ9H2W1 248 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 YTHDF2Q9Y5A9 579 aaKnown RBP6.95□□□□□ -1.3
CASC3-209ENST00000583902 LENEPQ9Y5L5 61 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 COL6A5A8TX70 2615 aa6.95□□□□□ -1.3
CASC3-209ENST00000583902 GGTLC3B5MD39 225 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 DIRC3C9JPN6 131 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 PEX7O00628 323 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 TCRAP04437 139 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 AKR1C3P42330 323 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 TMEM183BQ1AE95 376 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 PRR31Q5SQ13 230 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 SAPCD1Q5SSQ6 148 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 ADAMTSL5Q6ZMM2 481 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 C2CD4CQ8TF44 421 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 LINC00477Q96M19 166 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 DUX3Q96PT4 197 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 NIPSNAP3BQ9BS92 247 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 ZFP30Q9Y2G7 519 aa6.94□□□□□ -1.3
CASC3-209ENST00000583902 IGHV3OR16-13A0A075B7E8 117 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 IGHV3-49A0A0A0MS15 119 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 IGHV3-74A0A0B4J1X5 117 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 IGHV3-66A0A0C4DH42 116 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 DUSP14O95147 198 aaKnown RBP6.93□□□□□ -1.3
CASC3-209ENST00000583902 SFTA3P0C7M3 94 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 UBE2G1P62253 170 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 CD300EQ496F6 205 aaPredicted RBP6.93□□□□□ -1.3
CASC3-209ENST00000583902 C10orf91Q5T1B1 145 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 TMEM61Q8N0U2 210 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 OR10J6PQ8NGY7 276 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 CLUHP3Q96NS8 147 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 CITED4Q96RK1 184 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 NDFIP1Q9BT67 221 aa6.93□□□□□ -1.3
CASC3-209ENST00000583902 ZNF727A8MUV8 499 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 B4DEV8 164 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 SLC17A3O00476 420 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 ATP5G3P48201 142 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 TMEM241Q24JQ0 296 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 EBLN2Q6P2I7 272 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 FOXI2Q6ZQN5 318 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 C9orf47Q6ZRZ4 202 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 SVBPQ8N300 66 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 SPATA3Q8NHX4 192 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 C17orf77Q96MU5 243 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 ODF3Q96PU9 254 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 SMIM7Q9BQ49 75 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 NAT8Q9UHE5 227 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 CARHSP1Q9Y2V2 147 aaKnown RBP6.92□□□□□ -1.3
CASC3-209ENST00000583902 NOTCH3Q9UM47 2321 aa6.92□□□□□ -1.3
CASC3-209ENST00000583902 TRAV8-2A0A0B4J237 113 aa6.91□□□□□ -1.3
CASC3-209ENST00000583902 F8W036 122 aa6.91□□□□□ -1.3
CASC3-209ENST00000583902 EIF3GO75821 320 aaKnown RBP eCLIP6.91□□□□□ -1.3
CASC3-209ENST00000583902 SNAPINO95295 136 aa6.91□□□□□ -1.3
CASC3-209ENST00000583902 GNG4P50150 75 aa6.91□□□□□ -1.3
CASC3-209ENST00000583902 BEAN1Q3B7T3 259 aa6.91□□□□□ -1.3
CASC3-209ENST00000583902 TMEM78Q5T7P6 136 aa6.91□□□□□ -1.3
CASC3-209ENST00000583902 COX8CQ7Z4L0 72 aa6.91□□□□□ -1.3
CASC3-209ENST00000583902 EXOC3-AS1Q8N2X6 119 aa6.91□□□□□ -1.3
CASC3-209ENST00000583902 ZNF738Q8NE65 137 aa6.91□□□□□ -1.3
CASC3-209ENST00000583902 PARLQ9H300 379 aa6.91□□□□□ -1.3
CASC3-209ENST00000583902 STAB1Q9NY15 2570 aa6.9□□□□□ -1.3
CASC3-209ENST00000583902 SCO2A0A1W2PP80 73 aa6.9□□□□□ -1.3
CASC3-209ENST00000583902 OR11H12B2RN74 326 aa6.9□□□□□ -1.3
CASC3-209ENST00000583902 LTAP01374 205 aa6.9□□□□□ -1.3
CASC3-209ENST00000583902 TSPOP30536 169 aa6.9□□□□□ -1.3
CASC3-209ENST00000583902 RPL35P42766 123 aaKnown RBP6.9□□□□□ -1.3
CASC3-209ENST00000583902 FLI1Q01543 452 aaPredicted RBP6.9□□□□□ -1.3
CASC3-209ENST00000583902 GOLT1AQ6ZVE7 132 aa6.9□□□□□ -1.3
CASC3-209ENST00000583902 GTSCR1Q86UQ5 136 aa6.9□□□□□ -1.3
CASC3-209ENST00000583902 SLC7A5P1Q8MH63 180 aa6.9□□□□□ -1.3
CASC3-209ENST00000583902 OR8A1Q8NGG7 326 aa6.9□□□□□ -1.3
CASC3-209ENST00000583902 TVP23CQ96ET8 276 aa6.9□□□□□ -1.3
CASC3-209ENST00000583902 ZNF256Q9Y2P7 627 aaPredicted RBP6.9□□□□□ -1.3
CASC3-209ENST00000583902 CUBNO60494 3623 aa6.9□□□□□ -1.31
CASC3-209ENST00000583902 NPIPB6E9PJ23 425 aa6.89□□□□□ -1.31
CASC3-209ENST00000583902 AMBPP02760 352 aa6.89□□□□□ -1.31
CASC3-209ENST00000583902 ZNF138P52744 262 aa6.89□□□□□ -1.31
CASC3-209ENST00000583902 NUTF2P61970 127 aaKnown RBP6.89□□□□□ -1.31
CASC3-209ENST00000583902 SRSF3P84103 164 aaKnown RBP6.89□□□□□ -1.31
CASC3-209ENST00000583902 RHEBQ15382 184 aa6.89□□□□□ -1.31
CASC3-209ENST00000583902 GUCA2BQ16661 112 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms