RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 TFPI2P48307 235 aa8.26□□□□□ -1.09
TOP3A-216ENST00000583804 CEBPGP53567 150 aa8.26□□□□□ -1.09
TOP3A-216ENST00000583804 MEF2BQ02080 365 aaPredicted RBP8.26□□□□□ -1.09
TOP3A-216ENST00000583804 ELOBQ15370 118 aa8.26□□□□□ -1.09
TOP3A-216ENST00000583804 CST9LP1Q5W188 147 aa8.26□□□□□ -1.09
TOP3A-216ENST00000583804 IGFL4Q6B9Z1 124 aa8.26□□□□□ -1.09
TOP3A-216ENST00000583804 ZFP82Q8N141 532 aa8.26□□□□□ -1.09
TOP3A-216ENST00000583804 GBGT1Q8N5D6 347 aa8.26□□□□□ -1.09
TOP3A-216ENST00000583804 FXYD5Q96DB9 178 aa8.26□□□□□ -1.09
TOP3A-216ENST00000583804 CTDSP1Q9GZU7 261 aa8.26□□□□□ -1.09
TOP3A-216ENST00000583804 RPH3ALQ9UNE2 315 aa8.26□□□□□ -1.09
TOP3A-216ENST00000583804 YTHDF2Q9Y5A9 579 aaKnown RBP8.26□□□□□ -1.09
TOP3A-216ENST00000583804 HELTA6NFD8 242 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 SLC17A3O00476 420 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 ATP5G3P48201 142 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 PSMB3P49720 205 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 C1orf194Q5T5A4 169 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 LCN12Q6JVE5 192 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 SIGLEC15Q6ZMC9 328 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 BPIFA4PQ86YQ2 179 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 TMEM61Q8N0U2 210 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 GLMPQ8WWB7 406 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 TCEAL7Q9BRU2 100 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 ZNF586Q9NXT0 402 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 NAT8Q9UHE5 227 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 RNF24Q9Y225 148 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 SMAD5-AS1Q9Y6J3 95 aa8.25□□□□□ -1.09
TOP3A-216ENST00000583804 PKD1L1Q8TDX9 2849 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 TRAV25A0A0B4J276 109 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 SMIM6P0DI80 62 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 RPL7P18124 248 aaKnown RBP8.24□□□□□ -1.09
TOP3A-216ENST00000583804 HLA-DMBP28068 263 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 RPL35P42766 123 aaKnown RBP8.24□□□□□ -1.09
TOP3A-216ENST00000583804 GALR1P47211 349 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 AKR1D1P51857 326 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 CD81P60033 236 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 SNRPEP62304 92 aaKnown RBP8.24□□□□□ -1.09
TOP3A-216ENST00000583804 RANP62826 216 aaKnown RBP8.24□□□□□ -1.09
TOP3A-216ENST00000583804 PAFAH1B2P68402 229 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 PQLC2Q6ZP29 291 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 EXOC3-AS1Q8N2X6 119 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 STXBP6Q8NFX7 210 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 OR2K2Q8NGT1 345 aa8.24□□□□□ -1.09
TOP3A-216ENST00000583804 ZNF727A8MUV8 499 aa8.23□□□□□ -1.09
TOP3A-216ENST00000583804 MRPS12O15235 138 aaKnown RBP8.23□□□□□ -1.09
TOP3A-216ENST00000583804 WIPF1O43516 503 aa8.23□□□□□ -1.09
TOP3A-216ENST00000583804 IGLC2P0DOY2 106 aa8.23□□□□□ -1.09
TOP3A-216ENST00000583804 MEOX2P50222 304 aa8.23□□□□□ -1.09
TOP3A-216ENST00000583804 SAMD5Q5TGI4 173 aa8.23□□□□□ -1.09
TOP3A-216ENST00000583804 GPR82Q96P67 336 aa8.23□□□□□ -1.09
TOP3A-216ENST00000583804 TXNDC17Q9BRA2 123 aa8.23□□□□□ -1.09
TOP3A-216ENST00000583804 TMEM167BQ9NRX6 74 aa8.23□□□□□ -1.09
TOP3A-216ENST00000583804 TRBV24-1A0A075B6N3 115 aa8.22□□□□□ -1.09
TOP3A-216ENST00000583804 NBEAP1P0C6P0 100 aa8.22□□□□□ -1.09
TOP3A-216ENST00000583804 HIST1H1EP10412 219 aaKnown RBP8.22□□□□□ -1.09
TOP3A-216ENST00000583804 GNG5P63218 68 aa8.22□□□□□ -1.09
TOP3A-216ENST00000583804 S100A12P80511 92 aa8.22□□□□□ -1.09
TOP3A-216ENST00000583804 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.22□□□□□ -1.09
TOP3A-216ENST00000583804 RNF182Q8N6D2 247 aa8.22□□□□□ -1.09
TOP3A-216ENST00000583804 C12orf57Q99622 126 aa8.22□□□□□ -1.09
TOP3A-216ENST00000583804 MS4A6AQ9H2W1 248 aa8.22□□□□□ -1.09
TOP3A-216ENST00000583804 TMEM14CQ9P0S9 112 aa8.22□□□□□ -1.09
TOP3A-216ENST00000583804 ZMAT5Q9UDW3 170 aaKnown RBP8.22□□□□□ -1.09
TOP3A-216ENST00000583804 MGAM2Q2M2H8 2515 aa8.22□□□□□ -1.09
TOP3A-216ENST00000583804 OR4C46A6NHA9 309 aa8.21□□□□□ -1.09
TOP3A-216ENST00000583804 GGTLC3B5MD39 225 aa8.21□□□□□ -1.09
TOP3A-216ENST00000583804 C11orf94C9JXX5 98 aa8.21□□□□□ -1.09
TOP3A-216ENST00000583804 NDUFB4O95168 129 aa8.21□□□□□ -1.09
TOP3A-216ENST00000583804 CXCL1P09341 107 aa8.21□□□□□ -1.09
TOP3A-216ENST00000583804 RPS10P46783 165 aaKnown RBP8.21□□□□□ -1.09
TOP3A-216ENST00000583804 KRTAP10-11P60412 298 aa8.21□□□□□ -1.09
TOP3A-216ENST00000583804 TMEM241Q24JQ0 296 aa8.21□□□□□ -1.09
TOP3A-216ENST00000583804 SPAG8Q99932 426 aaPredicted RBP8.21□□□□□ -1.09
TOP3A-216ENST00000583804 SMIM7Q9BQ49 75 aa8.21□□□□□ -1.09
TOP3A-216ENST00000583804 Q9H3A6 140 aa8.21□□□□□ -1.09
TOP3A-216ENST00000583804 ZNF256Q9Y2P7 627 aaPredicted RBP8.21□□□□□ -1.09
TOP3A-216ENST00000583804 TRBV19A0A075B6N1 114 aa8.2□□□□□ -1.1
TOP3A-216ENST00000583804 SCO2A0A1W2PP80 73 aa8.2□□□□□ -1.1
TOP3A-216ENST00000583804 SUMO1P63165 101 aaKnown RBP8.2□□□□□ -1.1
TOP3A-216ENST00000583804 EGFEM1PQ0D2K5 195 aa8.2□□□□□ -1.1
TOP3A-216ENST00000583804 FABP9Q0Z7S8 132 aa8.2□□□□□ -1.1
TOP3A-216ENST00000583804 C16orf92Q96LL3 132 aa8.2□□□□□ -1.1
TOP3A-216ENST00000583804 PRR25Q96S07 402 aa8.2□□□□□ -1.1
TOP3A-216ENST00000583804 PYGO2Q9BRQ0 406 aa8.2□□□□□ -1.1
TOP3A-216ENST00000583804 NRN1Q9NPD7 142 aa8.2□□□□□ -1.1
TOP3A-216ENST00000583804 NBEAL1Q6ZS30 2694 aa8.2□□□□□ -1.1
TOP3A-216ENST00000583804 CMYA5Q8N3K9 4069 aa8.2□□□□□ -1.1
TOP3A-216ENST00000583804 PGPA6NDG6 321 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 F6UZH7 168 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 M0R3E3 92 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 PDE6DO43924 150 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 SLC25A5P05141 298 aaKnown RBP8.19□□□□□ -1.1
TOP3A-216ENST00000583804 HOXA5P20719 270 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 DEFB1P60022 68 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 RPL23P62829 140 aaKnown RBP8.19□□□□□ -1.1
TOP3A-216ENST00000583804 BEAN1Q3B7T3 259 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 GTSCR1Q86UQ5 136 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 ANAPC16Q96DE5 110 aa8.19□□□□□ -1.1
TOP3A-216ENST00000583804 SGK494Q96LW2 274 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms