RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 TMEM14CQ9P0S9 112 aa16.35■□□□□ 0.21
VAPA-205ENST00000578314 PRAC2D3DTV9 90 aa16.34■□□□□ 0.21
VAPA-205ENST00000578314 ZNF253O75346 499 aa16.34■□□□□ 0.21
VAPA-205ENST00000578314 PRM2P04554 102 aa16.34■□□□□ 0.21
VAPA-205ENST00000578314 TSPOP30536 169 aa16.34■□□□□ 0.21
VAPA-205ENST00000578314 CDKN1BP46527 198 aa16.34■□□□□ 0.21
VAPA-205ENST00000578314 TMEM256Q8N2U0 113 aa16.34■□□□□ 0.21
VAPA-205ENST00000578314 THAP6Q8TBB0 222 aa16.34■□□□□ 0.21
VAPA-205ENST00000578314 PPP1R1CQ8WVI7 109 aa16.34■□□□□ 0.21
VAPA-205ENST00000578314 NDUFAF3Q9BU61 184 aa16.34■□□□□ 0.21
VAPA-205ENST00000578314 DNAH6Q9C0G6 4158 aa16.34■□□□□ 0.21
VAPA-205ENST00000578314 SSNA1O43805 119 aa16.33■□□□□ 0.2
VAPA-205ENST00000578314 OR10J6PQ8NGY7 276 aa16.33■□□□□ 0.2
VAPA-205ENST00000578314 FAM210BQ96KR6 192 aa16.33■□□□□ 0.2
VAPA-205ENST00000578314 TRBV19A0A075B6N1 114 aa16.32■□□□□ 0.2
VAPA-205ENST00000578314 GCSAMLQ5JQS6 135 aa16.32■□□□□ 0.2
VAPA-205ENST00000578314 LINC01587Q99440 93 aa16.32■□□□□ 0.2
VAPA-205ENST00000578314 HIST1H1EP10412 219 aaKnown RBP16.31■□□□□ 0.2
VAPA-205ENST00000578314 AZU1P20160 251 aa16.31■□□□□ 0.2
VAPA-205ENST00000578314 TAS2R60P59551 318 aa16.31■□□□□ 0.2
VAPA-205ENST00000578314 CLINT1Q14677 625 aa16.31■□□□□ 0.2
VAPA-205ENST00000578314 WDR61Q9GZS3 305 aaKnown RBP16.31■□□□□ 0.2
VAPA-205ENST00000578314 PLAC8L1A1L4L8 177 aa16.3■□□□□ 0.2
VAPA-205ENST00000578314 LYRM9A8MSI8 78 aa16.3■□□□□ 0.2
VAPA-205ENST00000578314 MPC2O95563 127 aa16.3■□□□□ 0.2
VAPA-205ENST00000578314 DAD1P61803 113 aa16.3■□□□□ 0.2
VAPA-205ENST00000578314 NDUFB4O95168 129 aa16.29■□□□□ 0.2
VAPA-205ENST00000578314 PET100P0DJ07 73 aa16.29■□□□□ 0.2
VAPA-205ENST00000578314 PDE6HQ13956 83 aa16.29■□□□□ 0.2
VAPA-205ENST00000578314 MRPL53Q96EL3 112 aaKnown RBP16.29■□□□□ 0.2
VAPA-205ENST00000578314 C20orf144Q9BQM9 153 aa16.29■□□□□ 0.2
VAPA-205ENST00000578314 FAM167A-AS1Q96KT0 104 aa16.28■□□□□ 0.2
VAPA-205ENST00000578314 ODF3Q96PU9 254 aa16.28■□□□□ 0.2
VAPA-205ENST00000578314 SLC25A2Q9BXI2 301 aa16.28■□□□□ 0.2
VAPA-205ENST00000578314 KCNIP2Q9NS61 270 aa16.28■□□□□ 0.2
VAPA-205ENST00000578314 NPIPB6E9PJ23 425 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 P0DMU3 169 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 FAM231AP0DMU4 169 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 FAM231CP0DMU5 169 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 CT45A10P0DMU9 189 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 PYYP10082 97 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 KIR3DS1Q14943 382 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 ATP5SQ99766 215 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 PARD6GQ9BYG4 376 aaPredicted RBP16.27■□□□□ 0.2
VAPA-205ENST00000578314 PRELID1Q9Y255 219 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 HSPB11Q9Y547 144 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 TIMM9Q9Y5J7 89 aa16.27■□□□□ 0.2
VAPA-205ENST00000578314 H7BYZ3 331 aa16.26■□□□□ 0.19
VAPA-205ENST00000578314 ZNF493Q6ZR52 646 aa16.26■□□□□ 0.19
VAPA-205ENST00000578314 MIR17HGQ75NE6 70 aa16.26■□□□□ 0.19
VAPA-205ENST00000578314 C17orf112F2Z3M2 114 aa16.25■□□□□ 0.19
VAPA-205ENST00000578314 M0R3E3 92 aa16.25■□□□□ 0.19
VAPA-205ENST00000578314 HTN3P15516 51 aa16.25■□□□□ 0.19
VAPA-205ENST00000578314 RPL12P30050 165 aaKnown RBP16.25■□□□□ 0.19
VAPA-205ENST00000578314 GFI1BQ5VTD9 330 aa16.25■□□□□ 0.19
VAPA-205ENST00000578314 POM121L12Q8N7R1 296 aa16.25■□□□□ 0.19
VAPA-205ENST00000578314 C16orf74Q96GX8 76 aa16.25■□□□□ 0.19
VAPA-205ENST00000578314 MRPL32Q9BYC8 188 aaKnown RBP16.25■□□□□ 0.19
VAPA-205ENST00000578314 HTN1P15515 57 aa16.24■□□□□ 0.19
VAPA-205ENST00000578314 LEPP41159 167 aa16.24■□□□□ 0.19
VAPA-205ENST00000578314 BLNKQ8WV28 456 aa16.24■□□□□ 0.19
VAPA-205ENST00000578314 MBD2Q9UBB5 411 aa16.24■□□□□ 0.19
VAPA-205ENST00000578314 HECTD4Q9Y4D8 3996 aa16.23■□□□□ 0.19
VAPA-205ENST00000578314 DEFB130BP0DP73 79 aa16.23■□□□□ 0.19
VAPA-205ENST00000578314 DEFB130AP0DP74 79 aa16.23■□□□□ 0.19
VAPA-205ENST00000578314 FCN2Q15485 313 aa16.23■□□□□ 0.19
VAPA-205ENST00000578314 RNASE8Q8TDE3 154 aaKnown RBP16.23■□□□□ 0.19
VAPA-205ENST00000578314 OR51M1Q9H341 326 aa16.23■□□□□ 0.19
VAPA-205ENST00000578314 FUT9Q9Y231 359 aa16.23■□□□□ 0.19
VAPA-205ENST00000578314 TIMM8BQ9Y5J9 83 aaPredicted RBP16.23■□□□□ 0.19
VAPA-205ENST00000578314 NBEAP1P0C6P0 100 aa16.22■□□□□ 0.19
VAPA-205ENST00000578314 EXOC3-AS1Q8N2X6 119 aa16.22■□□□□ 0.19
VAPA-205ENST00000578314 TMEM263Q8WUH6 116 aaKnown RBP16.22■□□□□ 0.19
VAPA-205ENST00000578314 LINC00477Q96M19 166 aa16.22■□□□□ 0.19
VAPA-205ENST00000578314 ALG5Q9Y673 324 aa16.22■□□□□ 0.19
VAPA-205ENST00000578314 PTTG1O95997 202 aa16.21■□□□□ 0.19
VAPA-205ENST00000578314 ERCC8Q13216 396 aa16.21■□□□□ 0.19
VAPA-205ENST00000578314 TMEM88Q6PEY1 159 aa16.21■□□□□ 0.19
VAPA-205ENST00000578314 FXYD5Q96DB9 178 aa16.21■□□□□ 0.19
VAPA-205ENST00000578314 FAM19A4Q96LR4 140 aa16.21■□□□□ 0.19
VAPA-205ENST00000578314 PAXXQ9BUH6 204 aa16.21■□□□□ 0.19
VAPA-205ENST00000578314 AGPAT4-IT1Q9H0P7 198 aa16.21■□□□□ 0.19
VAPA-205ENST00000578314 AAMDCQ9H7C9 122 aa16.21■□□□□ 0.19
VAPA-205ENST00000578314 CBY3A6NI87 242 aa16.2■□□□□ 0.18
VAPA-205ENST00000578314 IFNA5P01569 189 aa16.2■□□□□ 0.18
VAPA-205ENST00000578314 ICAM4Q14773 271 aa16.2■□□□□ 0.18
VAPA-205ENST00000578314 SCGB1C1Q8TD33 95 aa16.2■□□□□ 0.18
VAPA-205ENST00000578314 SMIM3Q9BZL3 60 aa16.2■□□□□ 0.18
VAPA-205ENST00000578314 C9orf47Q6ZRZ4 202 aa16.19■□□□□ 0.18
VAPA-205ENST00000578314 CCDC28AQ8IWP9 274 aa16.19■□□□□ 0.18
VAPA-205ENST00000578314 RNF141Q8WVD5 230 aa16.19■□□□□ 0.18
VAPA-205ENST00000578314 WFDC1Q9HC57 220 aa16.19■□□□□ 0.18
VAPA-205ENST00000578314 TRAV12-3A0A0B4J271 114 aa16.18■□□□□ 0.18
VAPA-205ENST00000578314 J3KRW8 73 aa16.18■□□□□ 0.18
VAPA-205ENST00000578314 SLC25A5P05141 298 aaKnown RBP16.18■□□□□ 0.18
VAPA-205ENST00000578314 FFAR4Q5NUL3 377 aa16.18■□□□□ 0.18
VAPA-205ENST00000578314 NOP10Q9NPE3 64 aaKnown RBP16.18■□□□□ 0.18
VAPA-205ENST00000578314 KLLNB2CW77 178 aa16.17■□□□□ 0.18
VAPA-205ENST00000578314 ATP5G1P05496 136 aa16.17■□□□□ 0.18
VAPA-205ENST00000578314 OR10J4P0C629 311 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms