RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 UBE2WQ96B02 151 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 SHISA9B4DS77 424 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 PAX4O43316 350 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 BVES-AS1Q5T3Y7 98 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 THAP8Q8NA92 274 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 LINC00479Q96M42 142 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 WDR90Q96KV7 1748 aa8.67□□□□□ -1.02
SEC22B-201ENST00000578049 F8VRH5 84 aa8.66□□□□□ -1.02
SEC22B-201ENST00000578049 DAZ1Q9NQZ3 744 aaKnown RBP8.66□□□□□ -1.02
SEC22B-201ENST00000578049 Q0VFX4 171 aa8.66□□□□□ -1.02
SEC22B-201ENST00000578049 C20orf78Q9BR46 151 aa8.66□□□□□ -1.02
SEC22B-201ENST00000578049 CD24P25063 80 aa8.66□□□□□ -1.02
SEC22B-201ENST00000578049 CDKN1BP46527 198 aa8.66□□□□□ -1.02
SEC22B-201ENST00000578049 ETDBQ3ZM63 59 aa8.66□□□□□ -1.02
SEC22B-201ENST00000578049 CYYR1Q96J86 154 aa8.66□□□□□ -1.02
SEC22B-201ENST00000578049 PRIMA1Q86XR5 153 aa8.65□□□□□ -1.02
SEC22B-201ENST00000578049 PRR25Q96S07 402 aa8.65□□□□□ -1.02
SEC22B-201ENST00000578049 RSPO3Q9BXY4 272 aaPredicted RBP8.65□□□□□ -1.02
SEC22B-201ENST00000578049 ZNF688P0C7X2 276 aa8.65□□□□□ -1.02
SEC22B-201ENST00000578049 HLA-DRB4P13762 266 aa8.65□□□□□ -1.02
SEC22B-201ENST00000578049 HLA-DRB4X5D2U9 266 aa8.65□□□□□ -1.02
SEC22B-201ENST00000578049 ERCC8Q13216 396 aa8.65□□□□□ -1.02
SEC22B-201ENST00000578049 INSP01308 110 aa8.65□□□□□ -1.03
SEC22B-201ENST00000578049 IGKV3D-20A0A0C4DH25 116 aa8.65□□□□□ -1.03
SEC22B-201ENST00000578049 CD59P13987 128 aa8.65□□□□□ -1.03
SEC22B-201ENST00000578049 HAPLN4Q86UW8 402 aa8.65□□□□□ -1.03
SEC22B-201ENST00000578049 LINC01545Q5VT33 79 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 DEFB125Q8N687 156 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 C8orf31Q8N9H6 132 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 GATD1Q8NB37 220 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 SLC25A16P16260 332 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 TSSC4Q9Y5U2 329 aaPredicted RBP8.64□□□□□ -1.03
SEC22B-201ENST00000578049 A0A1B0GUS0 222 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 MRPL51Q4U2R6 128 aaKnown RBP8.64□□□□□ -1.03
SEC22B-201ENST00000578049 A0A087WX48 190 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 VGLL1Q99990 258 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 SMIM2Q9BVW6 85 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 RHPN1-AS1Q9BWJ2 59 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 PRO1854Q9UHT4 67 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 Q6ZS92 163 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 ATP6V0BQ99437 205 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 NCOR1O75376 2440 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 GAGE12HA6NDE8 117 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 H3BRN7 92 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 C5orf24Q7Z6I8 188 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 LENEPQ9Y5L5 61 aa8.64□□□□□ -1.03
SEC22B-201ENST00000578049 FANCMQ8IYD8 2048 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 IGHV3-64A0A075B6Q5 118 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 TRAV8-3A0A0A6YYJ7 113 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 IGLC7A0M8Q6 106 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 VWC2LB2RUY7 222 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 SMKR1H3BMG3 65 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 TMEM213A2RRL7 107 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 HLA-DMBP28068 263 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 C9orf153Q5TBE3 101 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 Q6ZSR3 168 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 HIST1H4AP62805 103 aaKnown RBP8.63□□□□□ -1.03
SEC22B-201ENST00000578049 RIF1Q5UIP0 2472 aaKnown RBP8.63□□□□□ -1.03
SEC22B-201ENST00000578049 LYNX1G3V0Z9 82 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 LYNX1P0DP58 116 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 SIGLEC8Q9NYZ4 499 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 B4DSR2 109 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 SOCS3O14543 225 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 MLANAQ16655 118 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 C6orf226Q5I0X4 101 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 TP53TG1Q9Y2A0 90 aa8.63□□□□□ -1.03
SEC22B-201ENST00000578049 DOCK11Q5JSL3 2073 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 ZNF114Q8NC26 417 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 HS3ST6Q96QI5 342 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 SPTBN2O15020 2390 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 PKDREJQ9NTG1 2253 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 HEATR1Q9H583 2144 aaKnown RBP8.62□□□□□ -1.03
SEC22B-201ENST00000578049 C15orf65H3BRN8 121 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 ZNF747Q9BV97 191 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 IGHV2-70DA0A0C4DH43 119 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 TEX36Q5VZQ5 186 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 CEND1Q8N111 149 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 LAMTOR3Q9UHA4 124 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 FXYD7P58549 80 aa8.62□□□□□ -1.03
SEC22B-201ENST00000578049 A0A0U1RRA0 63 aa8.61□□□□□ -1.03
SEC22B-201ENST00000578049 I3L3M4 83 aa8.61□□□□□ -1.03
SEC22B-201ENST00000578049 PHF3Q92576 2039 aaKnown RBP8.61□□□□□ -1.03
SEC22B-201ENST00000578049 LTAP01374 205 aa8.61□□□□□ -1.03
SEC22B-201ENST00000578049 FXYD5Q96DB9 178 aa8.61□□□□□ -1.03
SEC22B-201ENST00000578049 RSPO1Q2MKA7 263 aaPredicted RBP8.61□□□□□ -1.03
SEC22B-201ENST00000578049 C1orf159Q96HA4 380 aa8.61□□□□□ -1.03
SEC22B-201ENST00000578049 WIPF3A6NGB9 483 aa8.61□□□□□ -1.03
SEC22B-201ENST00000578049 SRD5A1P18405 259 aa8.61□□□□□ -1.03
SEC22B-201ENST00000578049 FCN3O75636 299 aa8.61□□□□□ -1.03
SEC22B-201ENST00000578049 UBE2E1P51965 193 aa8.61□□□□□ -1.03
SEC22B-201ENST00000578049 ZNF493Q6ZR52 646 aa8.61□□□□□ -1.03
SEC22B-201ENST00000578049 MRPL53Q96EL3 112 aaKnown RBP8.61□□□□□ -1.03
SEC22B-201ENST00000578049 PTPRDP23468 1912 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 LINC00205P59089 165 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 SPXQ9BT56 116 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 EDA2RQ9HAV5 297 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 GATA3P23771 443 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 GAGE2AQ6NT46 116 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 PRSS57Q6UWY2 283 aa8.6□□□□□ -1.03
SEC22B-201ENST00000578049 MRPL35Q9NZE8 188 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms