RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 RPL23P62829 140 aaKnown RBP7.76□□□□□ -1.17
SS18-207ENST00000577636 FAM106AQ4KMX7 169 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 CASC10Q5T4H9 136 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 ZNF343Q6P1L6 599 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 MUC7Q8TAX7 377 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 ELOVL1Q9BW60 279 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 Q9H3A6 140 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 TMEM242Q9NWH2 141 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 EPDR1Q9UM22 224 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 LY96Q9Y6Y9 160 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 TENM3Q9P273 2699 aa7.76□□□□□ -1.17
SS18-207ENST00000577636 IGLC2P0DOY2 106 aa7.75□□□□□ -1.17
SS18-207ENST00000577636 FMC1Q96HJ9 113 aa7.75□□□□□ -1.17
SS18-207ENST00000577636 ATG101Q9BSB4 218 aa7.75□□□□□ -1.17
SS18-207ENST00000577636 DERL1Q9BUN8 251 aa7.75□□□□□ -1.17
SS18-207ENST00000577636 KLK15Q9H2R5 256 aa7.75□□□□□ -1.17
SS18-207ENST00000577636 ZFAND3Q9H8U3 227 aa7.75□□□□□ -1.17
SS18-207ENST00000577636 BIN3Q9NQY0 253 aa7.75□□□□□ -1.17
SS18-207ENST00000577636 ZNF586Q9NXT0 402 aa7.75□□□□□ -1.17
SS18-207ENST00000577636 RPH3ALQ9UNE2 315 aa7.75□□□□□ -1.17
SS18-207ENST00000577636 SERTM2A0A1B0GWG4 89 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 ZNF320A2RRD8 509 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 H3BTX0 84 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 SNRPCP09234 159 aaKnown RBP7.74□□□□□ -1.17
SS18-207ENST00000577636 CENPWQ5EE01 88 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 KCNIP4Q6PIL6 250 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 LINC01551Q86U37 167 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 C2CD4CQ8TF44 421 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 ZNF414Q96IQ9 312 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 BTF3L4Q96K17 158 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 UBE2E2Q96LR5 201 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 TMA7Q9Y2S6 64 aaKnown RBP7.74□□□□□ -1.17
SS18-207ENST00000577636 UFC1Q9Y3C8 167 aa7.74□□□□□ -1.17
SS18-207ENST00000577636 IGHV3OR16-8A0A075B7F1 116 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 FBLL1A6NHQ2 334 aaKnown RBP7.73□□□□□ -1.17
SS18-207ENST00000577636 CCL24O00175 119 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 BUB3O43684 328 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 ZNF253O75346 499 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 TCRAP04437 139 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 LGALS1P09382 135 aaKnown RBP7.73□□□□□ -1.17
SS18-207ENST00000577636 MGST1P10620 155 aaKnown RBP7.73□□□□□ -1.17
SS18-207ENST00000577636 RPEL1Q2QD12 228 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 DEFB136Q30KP8 78 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 RNF212Q495C1 297 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 ZFAND6Q6FIF0 208 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 SMIM12Q96EX1 92 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 RAX2Q96IS3 184 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 SLC50A1Q9BRV3 221 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 CLEC5AQ9NY25 188 aa7.73□□□□□ -1.17
SS18-207ENST00000577636 RPLP1P05386 114 aaKnown RBP7.72□□□□□ -1.17
SS18-207ENST00000577636 ERVFC1-1P60608 527 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 RPL19P84098 196 aaKnown RBP7.72□□□□□ -1.17
SS18-207ENST00000577636 TMEM183BQ1AE95 376 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 LCNL1Q6ZST4 164 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 BAGE2Q86Y30 109 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 EXOC3-AS1Q8N2X6 119 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 ARL6IP6Q8N6S5 226 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 OR10G8Q8NGN5 311 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 OCC1Q8TAD7 63 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 ISOC2Q96AB3 205 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 SFRP2Q96HF1 295 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 RCHY1Q96PM5 261 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 DAZ1Q9NQZ3 744 aaKnown RBP7.72□□□□□ -1.17
SS18-207ENST00000577636 TENM2Q9NT68 2774 aa7.72□□□□□ -1.17
SS18-207ENST00000577636 A0A087X0K7 114 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 K7EMT4 169 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 MRPS12O15235 138 aaKnown RBP7.71□□□□□ -1.18
SS18-207ENST00000577636 ZNF207O43670 478 aaKnown RBP7.71□□□□□ -1.18
SS18-207ENST00000577636 TRBV12-3P01733 135 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 GNG5P63218 68 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 SAMD13Q5VXD3 122 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 SIGLEC15Q6ZMC9 328 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 GOLT1AQ6ZVE7 132 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 GPHB5Q86YW7 130 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 FAM24BQ8N5W8 94 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 RNF152Q8N8N0 203 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 KLF12Q9Y4X4 402 aa7.71□□□□□ -1.18
SS18-207ENST00000577636 TRBV20OR9-2A0A075B6H5 130 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 IGHV3-66A0A0C4DH42 116 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 LCE6AA0A183 80 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 PGPEP1LA6NFU8 196 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 ISLRO14498 428 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 RPL11P62913 178 aaKnown RBP7.7□□□□□ -1.18
SS18-207ENST00000577636 C16orf54Q6UWD8 224 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 SBSPONQ8IVN8 264 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 TMEM75Q8N9X5 138 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 IGF2BP2-AS1Q96M15 143 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 IMMP2LQ96T52 175 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 MLXQ9UH92 298 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 SMAD5-AS1Q9Y6J3 95 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 URGCP-MRPS24S4R325 110 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 U3KQE9 123 aa7.7□□□□□ -1.18
SS18-207ENST00000577636 IGHV3OR16-13A0A075B7E8 117 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 IGHV3-49A0A0A0MS15 119 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 IGHV3-74A0A0B4J1X5 117 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 TRAV34A0A0B4J273 112 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 IGHV7-4-1A0A0J9YVY3 117 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 TRBV6-1A0A0K0K1D8 114 aa7.69□□□□□ -1.18
SS18-207ENST00000577636 COLCA2A8K830 154 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms