RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 H3BMG7 143 aa10.53□□□□□ -0.72
PCDHGB3-201ENST00000576222 TMEM95Q3KNT9 176 aa10.53□□□□□ -0.72
PCDHGB3-201ENST00000576222 ZC2HC1AQ96GY0 325 aa10.53□□□□□ -0.72
PCDHGB3-201ENST00000576222 K7ERJ3 54 aa10.53□□□□□ -0.72
PCDHGB3-201ENST00000576222 DUX4L9Q6RFH8 374 aaPredicted RBP10.53□□□□□ -0.72
PCDHGB3-201ENST00000576222 TNFRSF18Q9Y5U5 241 aa10.53□□□□□ -0.72
PCDHGB3-201ENST00000576222 LTAP01374 205 aa10.53□□□□□ -0.72
PCDHGB3-201ENST00000576222 ZNF833PQ6ZTB9 187 aa10.53□□□□□ -0.72
PCDHGB3-201ENST00000576222 SCRT2Q9NQ03 307 aa10.53□□□□□ -0.72
PCDHGB3-201ENST00000576222 OBSL1O75147 1896 aa10.53□□□□□ -0.72
PCDHGB3-201ENST00000576222 NPYP01303 97 aa10.52□□□□□ -0.72
PCDHGB3-201ENST00000576222 SNRPD3P62318 126 aaKnown RBP10.52□□□□□ -0.72
PCDHGB3-201ENST00000576222 THAP8Q8NA92 274 aa10.52□□□□□ -0.72
PCDHGB3-201ENST00000576222 DDB2Q92466 427 aa10.52□□□□□ -0.72
PCDHGB3-201ENST00000576222 CD7P09564 240 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 LY6EQ16553 131 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 DKK2Q9UBU2 259 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 SSBP2P81877 361 aaPredicted RBP10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 LINC01545Q5VT33 79 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 PCP2Q8IVA1 136 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 IGF2BP2-AS1Q96M15 143 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 LY6G6EA0A0G2JKS1 128 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 NDUFS7O75251 213 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 GTF3C1Q12789 2109 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 AMTNQ6UX39 209 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 U3KQA8 63 aa10.52□□□□□ -0.73
PCDHGB3-201ENST00000576222 CACNA1BQ00975 2339 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 IGLC1P0CG04 106 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 C11orf53Q8IXP5 236 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 MALRD1Q5VYJ5 2156 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 TEX48A0A1B0GUV7 120 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 BUB1B-PAK6H3BSN5 160 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 ANKRD39Q53RE8 183 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 LYPD2Q6UXB3 125 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 TMEM14CQ9P0S9 112 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 IGHV3-64A0A075B6Q5 118 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 IGHG3P01860 377 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 C15orf32Q32M92 178 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 CEND1Q8N111 149 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 RNF182Q8N6D2 247 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 DPH3P1Q9H4G8 78 aa10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 NUP210Q8TEM1 1887 aaPredicted RBP10.51□□□□□ -0.73
PCDHGB3-201ENST00000576222 NPFFO15130 113 aa10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 TMEM155Q4W5P6 130 aa10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 KMT2EQ8IZD2 1858 aa10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 Q8N8P6 123 aa10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 C5orf64Q2M2E5 130 aa10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 DYNLRB2Q8TF09 96 aa10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 MRPL35Q9NZE8 188 aaKnown RBP10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 FAM120AOSQ5T036 256 aa10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 MORN5Q5VZ52 161 aa10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 C14orf178Q8N769 122 aaPredicted RBP10.5□□□□□ -0.73
PCDHGB3-201ENST00000576222 IGHV3OR16-10A0A075B7F0 116 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 C9JAW5 83 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 ERCC8Q13216 396 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 DEFB104AQ8WTQ1 72 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 PPDPFLQ8WWR9 84 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 MED13Q9UHV7 2174 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 PRR25Q96S07 402 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 EML6Q6ZMW3 1958 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 KIAA1549LQ6ZVL6 1849 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 GATA4P43694 442 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 UCNP55089 124 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 RAX2Q96IS3 184 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 TPSG1Q9NRR2 321 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 TRAV12-3A0A0B4J271 114 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 IGHV3-11P01762 117 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 CNTFRP26992 372 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 ZNF474Q6S9Z5 364 aaPredicted RBP10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 SRSF8Q9BRL6 282 aaKnown RBP10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 TNCP24821 2201 aa10.49□□□□□ -0.73
PCDHGB3-201ENST00000576222 ARFGEF3Q5TH69 2177 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 OVOL1O14753 267 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 TAL2Q16559 108 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 SIGLEC15Q6ZMC9 328 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 ATRXP46100 2492 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 KIF26AQ9ULI4 1882 aaPredicted RBP10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 C2orf70A6NJV1 201 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 UBE2L6O14933 153 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 CLEC2AQ6UVW9 174 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 NPFFR1Q9GZQ6 430 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 TP53TG3Q9ULZ0 132 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 MBD3L4A6NDZ8 208 aaPredicted RBP10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 MBD3L3A6NE82 208 aaPredicted RBP10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 MBD3L5A6NJ08 208 aaPredicted RBP10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 NDUFB8O95169 186 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 MBD3L2Q8NHZ7 208 aaPredicted RBP10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 FAM167A-AS1Q96KT0 104 aa10.48□□□□□ -0.73
PCDHGB3-201ENST00000576222 TRBV20-1A0A075B6N2 111 aa10.47□□□□□ -0.73
PCDHGB3-201ENST00000576222 MYMXA0A1B0GTQ4 84 aa10.47□□□□□ -0.73
PCDHGB3-201ENST00000576222 C12orf74Q32Q52 190 aa10.47□□□□□ -0.73
PCDHGB3-201ENST00000576222 C2orf82Q6UX34 121 aa10.47□□□□□ -0.73
PCDHGB3-201ENST00000576222 M0R2P5 195 aa10.47□□□□□ -0.73
PCDHGB3-201ENST00000576222 P0C879 139 aa10.47□□□□□ -0.73
PCDHGB3-201ENST00000576222 SLC25A16P16260 332 aa10.47□□□□□ -0.73
PCDHGB3-201ENST00000576222 ATXN8Q156A1 80 aa10.47□□□□□ -0.73
PCDHGB3-201ENST00000576222 NUP37Q8NFH4 326 aa10.47□□□□□ -0.73
PCDHGB3-201ENST00000576222 YAE1D1Q9NRH1 226 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms