RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 CRYGDP07320 174 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 CT45A10P0DMU9 189 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 SSBP1Q04837 148 aaKnown RBP8.21□□□□□ -1.1
PRPF8-208ENST00000573716 NEGR1Q7Z3B1 354 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 ZBTB8BQ8NAP8 495 aaPredicted RBP8.21□□□□□ -1.1
PRPF8-208ENST00000573716 NTN5Q8WTR8 489 aaPredicted RBP8.21□□□□□ -1.1
PRPF8-208ENST00000573716 SCGB3A2Q96PL1 93 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 SLC50A1Q9BRV3 221 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 FUNDC2Q9BWH2 189 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 MCUBQ9NWR8 336 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 MRPL16Q9NX20 251 aaKnown RBP8.21□□□□□ -1.1
PRPF8-208ENST00000573716 PRO0255Q9UI72 69 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 SCP2D1Q9UJQ7 156 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 STRAPQ9Y3F4 350 aaKnown RBP8.21□□□□□ -1.1
PRPF8-208ENST00000573716 KLF12Q9Y4X4 402 aa8.21□□□□□ -1.1
PRPF8-208ENST00000573716 E5RGE8 158 aa8.2□□□□□ -1.1
PRPF8-208ENST00000573716 SLC17A3O00476 420 aa8.2□□□□□ -1.1
PRPF8-208ENST00000573716 RGS5O15539 181 aa8.2□□□□□ -1.1
PRPF8-208ENST00000573716 RRAS2P62070 204 aaPredicted RBP8.2□□□□□ -1.1
PRPF8-208ENST00000573716 ZNF415Q09FC8 603 aa8.2□□□□□ -1.1
PRPF8-208ENST00000573716 C11orf72Q8NBR9 251 aa8.2□□□□□ -1.1
PRPF8-208ENST00000573716 ZNF431Q8TF32 576 aaPredicted RBP8.2□□□□□ -1.1
PRPF8-208ENST00000573716 ST6GAL2Q96JF0 529 aa8.2□□□□□ -1.1
PRPF8-208ENST00000573716 ARV1Q9H2C2 271 aa8.2□□□□□ -1.1
PRPF8-208ENST00000573716 HHLA3Q9XRX5 114 aa8.2□□□□□ -1.1
PRPF8-208ENST00000573716 A0A087WXM4 84 aa8.19□□□□□ -1.1
PRPF8-208ENST00000573716 ATP6V1G2O95670 118 aa8.19□□□□□ -1.1
PRPF8-208ENST00000573716 CXCL2P19875 107 aa8.19□□□□□ -1.1
PRPF8-208ENST00000573716 SRIP30626 198 aa8.19□□□□□ -1.1
PRPF8-208ENST00000573716 CRYBA4P53673 196 aa8.19□□□□□ -1.1
PRPF8-208ENST00000573716 SELENOTP62341 195 aa8.19□□□□□ -1.1
PRPF8-208ENST00000573716 MRPS10P82664 201 aaKnown RBP8.19□□□□□ -1.1
PRPF8-208ENST00000573716 PATE2Q6UY27 113 aa8.19□□□□□ -1.1
PRPF8-208ENST00000573716 SMIM4Q8WVI0 70 aa8.19□□□□□ -1.1
PRPF8-208ENST00000573716 PCNPQ8WW12 178 aaKnown RBP8.19□□□□□ -1.1
PRPF8-208ENST00000573716 Q9HAA7 133 aa8.19□□□□□ -1.1
PRPF8-208ENST00000573716 TRGV4A0A0C4DH28 118 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 C7orf71A4D174 169 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 LRCOL1A6NCL2 159 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 MRPS12O15235 138 aaKnown RBP8.18□□□□□ -1.1
PRPF8-208ENST00000573716 SPINK4O60575 86 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
PRPF8-208ENST00000573716 VAMP1P23763 118 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 PLP1P60201 277 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 SLAQ13239 276 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 TEPPQ6URK8 271 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 LINC00305Q7Z4B0 112 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 BPIFA4PQ86YQ2 179 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 EIF4E3Q8N5X7 224 aaKnown RBP8.18□□□□□ -1.1
PRPF8-208ENST00000573716 Q8N814 137 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 MIXL1Q9H2W2 232 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 RNF24Q9Y225 148 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 RCL1Q9Y2P8 373 aaKnown RBP8.18□□□□□ -1.1
PRPF8-208ENST00000573716 PXMP4Q9Y6I8 212 aa8.18□□□□□ -1.1
PRPF8-208ENST00000573716 PIGBOS1A0A0B4J2F0 54 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 DUXBA0A1W2PPF3 345 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 K7EP13 123 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 SLC25A5P05141 298 aaKnown RBP8.17□□□□□ -1.1
PRPF8-208ENST00000573716 HOXB5P09067 269 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 RNASE4P34096 147 aaKnown RBP8.17□□□□□ -1.1
PRPF8-208ENST00000573716 TCL1AP56279 114 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 SLC38A11Q08AI6 406 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 ERCC8Q13216 396 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 BTN1A1Q13410 526 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 IL18Q14116 193 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 FHL2Q14192 279 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 C10orf126Q8N4M7 172 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 ODF3Q96PU9 254 aa8.17□□□□□ -1.1
PRPF8-208ENST00000573716 K7EQD1 137 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 GOSR2O14653 212 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 RGS13O14921 159 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 COX7A2P2O60397 106 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 GHRHP01286 108 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 SLC25A6P12236 298 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 GYPEP15421 78 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 CD300CQ08708 224 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 VGLL1Q99990 258 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 PSENENQ9NZ42 101 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 TP53TG3Q9ULZ0 132 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 RABL2BQ9UNT1 228 aa8.16□□□□□ -1.1
PRPF8-208ENST00000573716 ANKRD20A5PA0PJZ0 165 aa8.15□□□□□ -1.1
PRPF8-208ENST00000573716 H3BQ15 152 aa8.15□□□□□ -1.1
PRPF8-208ENST00000573716 MPDU1O75352 247 aa8.15□□□□□ -1.1
PRPF8-208ENST00000573716 CCNKO75909 580 aa8.15□□□□□ -1.1
PRPF8-208ENST00000573716 ANXA2RQ3ZCQ2 193 aa8.15□□□□□ -1.1
PRPF8-208ENST00000573716 ARPC5LQ9BPX5 153 aa8.15□□□□□ -1.1
PRPF8-208ENST00000573716 NAA50Q9GZZ1 169 aaKnown RBP8.15□□□□□ -1.1
PRPF8-208ENST00000573716 CCDC59Q9P031 241 aaKnown RBP8.15□□□□□ -1.1
PRPF8-208ENST00000573716 MGAT4CQ9UBM8 478 aa8.15□□□□□ -1.1
PRPF8-208ENST00000573716 CTDSP2O14595 271 aa8.14□□□□□ -1.11
PRPF8-208ENST00000573716 SSSCA1O60232 199 aa8.14□□□□□ -1.11
PRPF8-208ENST00000573716 C1QBP02746 253 aa8.14□□□□□ -1.11
PRPF8-208ENST00000573716 GPX1P07203 203 aa8.14□□□□□ -1.11
PRPF8-208ENST00000573716 SFTA3P0C7M3 94 aa8.14□□□□□ -1.11
PRPF8-208ENST00000573716 POLR2GP62487 172 aaKnown RBP eCLIP8.14□□□□□ -1.11
PRPF8-208ENST00000573716 OPCMLQ14982 345 aa8.14□□□□□ -1.11
PRPF8-208ENST00000573716 MORN5Q5VZ52 161 aa8.14□□□□□ -1.11
PRPF8-208ENST00000573716 DIRAS2Q96HU8 199 aa8.14□□□□□ -1.11
PRPF8-208ENST00000573716 MRPL32Q9BYC8 188 aaKnown RBP8.14□□□□□ -1.11
PRPF8-208ENST00000573716 NPVFQ9HCQ7 196 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms