RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 FAM104BQ5XKR9 115 aa13.7□□□□□ -0.22
SCARF1-205ENST00000571272 Q6AWC8 147 aa13.7□□□□□ -0.22
SCARF1-205ENST00000571272 TLN1Q9Y490 2541 aaKnown RBP13.7□□□□□ -0.22
SCARF1-205ENST00000571272 ZNF493Q6ZR52 646 aa13.7□□□□□ -0.22
SCARF1-205ENST00000571272 WFDC3Q8IUB2 231 aa13.7□□□□□ -0.22
SCARF1-205ENST00000571272 VPS25Q9BRG1 176 aa13.7□□□□□ -0.22
SCARF1-205ENST00000571272 SPTA1P02549 2419 aa13.7□□□□□ -0.22
SCARF1-205ENST00000571272 LY6LH3BQJ8 138 aa13.69□□□□□ -0.22
SCARF1-205ENST00000571272 IGFL4Q6B9Z1 124 aa13.69□□□□□ -0.22
SCARF1-205ENST00000571272 ORMDL3Q8N138 153 aa13.69□□□□□ -0.22
SCARF1-205ENST00000571272 PEF1Q9UBV8 284 aaKnown RBP13.69□□□□□ -0.22
SCARF1-205ENST00000571272 RABAC1Q9UI14 185 aa13.69□□□□□ -0.22
SCARF1-205ENST00000571272 GAGE12BA1L429 117 aa13.69□□□□□ -0.22
SCARF1-205ENST00000571272 FGF6P10767 208 aa13.69□□□□□ -0.22
SCARF1-205ENST00000571272 HES1Q14469 280 aa13.69□□□□□ -0.22
SCARF1-205ENST00000571272 MRPL51Q4U2R6 128 aaKnown RBP13.69□□□□□ -0.22
SCARF1-205ENST00000571272 PRR30Q53SZ7 412 aaPredicted RBP13.69□□□□□ -0.22
SCARF1-205ENST00000571272 Q8TAT8 98 aa13.69□□□□□ -0.22
SCARF1-205ENST00000571272 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.69□□□□□ -0.22
SCARF1-205ENST00000571272 NAA38Q9BRA0 125 aaKnown RBP13.69□□□□□ -0.22
SCARF1-205ENST00000571272 ANKHD1Q8IWZ3 2542 aaKnown RBP13.68□□□□□ -0.22
SCARF1-205ENST00000571272 WI2-2373I1.2A0A1W2PRP0 233 aa13.68□□□□□ -0.22
SCARF1-205ENST00000571272 NBR2O15453 112 aa13.68□□□□□ -0.22
SCARF1-205ENST00000571272 LY6HO94772 140 aa13.68□□□□□ -0.22
SCARF1-205ENST00000571272 IGHV3OR16-8A0A075B7F1 116 aa13.68□□□□□ -0.22
SCARF1-205ENST00000571272 B9A039 149 aa13.68□□□□□ -0.22
SCARF1-205ENST00000571272 PTPRZ1P23471 2315 aaPredicted RBP13.68□□□□□ -0.22
SCARF1-205ENST00000571272 TWIST1Q15672 202 aa13.67□□□□□ -0.22
SCARF1-205ENST00000571272 Q8NA96 180 aa13.67□□□□□ -0.22
SCARF1-205ENST00000571272 THYN1Q9P016 225 aa13.67□□□□□ -0.22
SCARF1-205ENST00000571272 NPIPB5A8MRT5 1133 aa13.67□□□□□ -0.22
SCARF1-205ENST00000571272 EGR2P11161 476 aaPredicted RBP13.67□□□□□ -0.22
SCARF1-205ENST00000571272 CKS2P33552 79 aa13.67□□□□□ -0.22
SCARF1-205ENST00000571272 KLRD1Q13241 179 aa13.67□□□□□ -0.22
SCARF1-205ENST00000571272 RNF5Q99942 180 aa13.67□□□□□ -0.22
SCARF1-205ENST00000571272 NPYP01303 97 aa13.66□□□□□ -0.22
SCARF1-205ENST00000571272 CD3EP07766 207 aa13.66□□□□□ -0.22
SCARF1-205ENST00000571272 LINC01560Q8TB33 94 aa13.66□□□□□ -0.22
SCARF1-205ENST00000571272 SRSF8Q9BRL6 282 aaKnown RBP13.66□□□□□ -0.22
SCARF1-205ENST00000571272 FANCD2OSQ96PS1 177 aa13.66□□□□□ -0.22
SCARF1-205ENST00000571272 U3KQK5 164 aa13.66□□□□□ -0.22
SCARF1-205ENST00000571272 IGHV3-35A0A0C4DH35 117 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 HBDP02042 147 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 HLA-DMBP28068 263 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 ZNF80P51504 273 aaPredicted RBP13.65□□□□□ -0.22
SCARF1-205ENST00000571272 PRSS57Q6UWY2 283 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 GAGE10A6NGK3 116 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 MFAP4P55083 255 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 SEC11AP67812 179 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 PDE6HQ13956 83 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 LGALS9BQ3B8N2 356 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 LGALS9CQ6DKI2 356 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 PRR25Q96S07 402 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 VGLL1Q99990 258 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 DPM3Q9P2X0 92 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 NMUP48645 174 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 RPS20P60866 119 aaKnown RBP13.65□□□□□ -0.22
SCARF1-205ENST00000571272 C18orf15Q96N68 181 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 RAB1BQ9H0U4 201 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 MSRB1Q9NZV6 116 aa13.65□□□□□ -0.22
SCARF1-205ENST00000571272 COTL1Q14019 142 aa13.64□□□□□ -0.23
SCARF1-205ENST00000571272 IFI27L1Q96BM0 104 aa13.64□□□□□ -0.23
SCARF1-205ENST00000571272 F8W735 103 aaPredicted RBP13.64□□□□□ -0.23
SCARF1-205ENST00000571272 PPBPP02775 128 aa13.64□□□□□ -0.23
SCARF1-205ENST00000571272 PCP2Q8IVA1 136 aa13.64□□□□□ -0.23
SCARF1-205ENST00000571272 BOD1L2Q8IYS8 172 aa13.64□□□□□ -0.23
SCARF1-205ENST00000571272 FER1L6-AS1Q8NA97 138 aa13.63□□□□□ -0.23
SCARF1-205ENST00000571272 CFHR4Q92496 578 aa13.63□□□□□ -0.23
SCARF1-205ENST00000571272 RAB37Q96AX2 223 aa13.63□□□□□ -0.23
SCARF1-205ENST00000571272 AP1S3Q96PC3 154 aa13.63□□□□□ -0.23
SCARF1-205ENST00000571272 DKK2Q9UBU2 259 aa13.63□□□□□ -0.23
SCARF1-205ENST00000571272 NCBP2LA6PVI3 153 aaKnown RBP13.63□□□□□ -0.23
SCARF1-205ENST00000571272 H3BUT2 72 aa13.63□□□□□ -0.23
SCARF1-205ENST00000571272 GAS8-AS1O95177 125 aa13.63□□□□□ -0.23
SCARF1-205ENST00000571272 NDPQ00604 133 aa13.63□□□□□ -0.23
SCARF1-205ENST00000571272 ZNF672Q499Z4 452 aaPredicted RBP13.63□□□□□ -0.23
SCARF1-205ENST00000571272 IGLV11-55A0A075B6I3 123 aa13.62□□□□□ -0.23
SCARF1-205ENST00000571272 A1L4Q6 167 aa13.62□□□□□ -0.23
SCARF1-205ENST00000571272 SMAD7O15105 426 aaKnown RBP13.62□□□□□ -0.23
SCARF1-205ENST00000571272 C5orf64Q2M2E5 130 aa13.62□□□□□ -0.23
SCARF1-205ENST00000571272 JMJD8Q96S16 334 aa13.62□□□□□ -0.23
SCARF1-205ENST00000571272 C21orf62Q9NYP8 219 aa13.62□□□□□ -0.23
SCARF1-205ENST00000571272 CEP295Q9C0D2 2601 aa13.62□□□□□ -0.23
SCARF1-205ENST00000571272 PAX8Q06710 450 aa13.62□□□□□ -0.23
SCARF1-205ENST00000571272 NDUFS7O75251 213 aa13.61□□□□□ -0.23
SCARF1-205ENST00000571272 ORM1P02763 201 aa13.61□□□□□ -0.23
SCARF1-205ENST00000571272 OR1N2Q8NGR9 330 aa13.61□□□□□ -0.23
SCARF1-205ENST00000571272 DPF1Q92782 380 aa13.61□□□□□ -0.23
SCARF1-205ENST00000571272 KIR3DS1Q14943 382 aa13.61□□□□□ -0.23
SCARF1-205ENST00000571272 S100A7AQ86SG5 101 aa13.61□□□□□ -0.23
SCARF1-205ENST00000571272 SAP30O75446 220 aa13.61□□□□□ -0.23
SCARF1-205ENST00000571272 RPL7P18124 248 aaKnown RBP13.61□□□□□ -0.23
SCARF1-205ENST00000571272 TM4SF20Q53R12 229 aa13.61□□□□□ -0.23
SCARF1-205ENST00000571272 TMEM190Q8WZ59 177 aa13.61□□□□□ -0.23
SCARF1-205ENST00000571272 A6NDN8 102 aa13.6□□□□□ -0.23
SCARF1-205ENST00000571272 NDUFA3O95167 84 aa13.6□□□□□ -0.23
SCARF1-205ENST00000571272 GRNP28799 593 aaKnown RBP13.6□□□□□ -0.23
SCARF1-205ENST00000571272 PPIFP30405 207 aaKnown RBP13.6□□□□□ -0.23
SCARF1-205ENST00000571272 NPBQ8NG41 125 aa13.6□□□□□ -0.23
SCARF1-205ENST00000571272 ARPC1AQ92747 370 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms