RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 ATG101Q9BSB4 218 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 UQCC1Q9NVA1 299 aa8.58□□□□□ -1.04
GTF3C1-204ENST00000564664 KIAA1109Q2LD37 5005 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 IGLV2-18A0A075B6J9 118 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 FAM25EA8MYX2 175 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 F5H768 121 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 PRM2P04554 102 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 IGLC2P0DOY2 106 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 SULT1A1P50225 295 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 HBG1P69891 147 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 HBG2P69892 147 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 OPCMLQ14982 345 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 ATP6V1FQ16864 119 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 C11orf1Q9H5F2 150 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 WDR83OSQ9Y284 106 aa8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 LSM5Q9Y4Y9 91 aaKnown RBP8.57□□□□□ -1.04
GTF3C1-204ENST00000564664 FAT2Q9NYQ8 4349 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 TRAV6A0A075B6T7 132 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 MPDU1O75352 247 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 H2AFB2P0C5Z0 115 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 HTN1P15515 57 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 LEPP41159 167 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 CCL18P55774 89 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 FCN2Q15485 313 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 STX12Q86Y82 276 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 RNASE8Q8TDE3 154 aaKnown RBP8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 MRPL53Q96EL3 112 aaKnown RBP8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 ZNF503Q96F45 646 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 LYRM2Q9NU23 88 aaPredicted RBP8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 NUDT15Q9NV35 164 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 DNAH2Q9P225 4427 aa8.56□□□□□ -1.04
GTF3C1-204ENST00000564664 hCG_2014768A0A024R1R8 64 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 FAM24AA6NFZ4 105 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 CCSO14618 274 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 CST7O76096 145 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 IL15RAQ13261 267 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 MZT2BQ6NZ67 158 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 TMEM252Q8N6L7 170 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 LINC00612Q8N6U2 182 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 KRTAP17-1Q9BYP8 105 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 NOP10Q9NPE3 64 aaKnown RBP8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 SLC39A9Q9NUM3 307 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 TMEM14CQ9P0S9 112 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 PRELID1Q9Y255 219 aa8.55□□□□□ -1.04
GTF3C1-204ENST00000564664 FAM240BA0A1B0GVZ2 78 aa8.54□□□□□ -1.04
GTF3C1-204ENST00000564664 H3BNG1 76 aa8.54□□□□□ -1.04
GTF3C1-204ENST00000564664 H3BQ15 152 aa8.54□□□□□ -1.04
GTF3C1-204ENST00000564664 NUDT3O95989 172 aa8.54□□□□□ -1.04
GTF3C1-204ENST00000564664 PDE6HQ13956 83 aa8.54□□□□□ -1.04
GTF3C1-204ENST00000564664 MORN5Q5VZ52 161 aa8.54□□□□□ -1.04
GTF3C1-204ENST00000564664 MIC13Q5XKP0 118 aa8.54□□□□□ -1.04
GTF3C1-204ENST00000564664 LINC00477Q96M19 166 aa8.54□□□□□ -1.04
GTF3C1-204ENST00000564664 SEC22CQ9BRL7 303 aa8.54□□□□□ -1.04
GTF3C1-204ENST00000564664 PYGO2Q9BRQ0 406 aa8.54□□□□□ -1.04
GTF3C1-204ENST00000564664 NACAE9PAV3 2078 aa8.53□□□□□ -1.04
GTF3C1-204ENST00000564664 PRAC2D3DTV9 90 aa8.53□□□□□ -1.04
GTF3C1-204ENST00000564664 NPIPB6E9PJ23 425 aa8.53□□□□□ -1.04
GTF3C1-204ENST00000564664 SLC17A3O00476 420 aa8.53□□□□□ -1.04
GTF3C1-204ENST00000564664 HIST1H1EP10412 219 aaKnown RBP8.53□□□□□ -1.04
GTF3C1-204ENST00000564664 BAXQ07812 192 aa8.53□□□□□ -1.04
GTF3C1-204ENST00000564664 DAZ2Q13117 558 aaKnown RBP8.53□□□□□ -1.04
GTF3C1-204ENST00000564664 GFI1BQ5VTD9 330 aa8.53□□□□□ -1.04
GTF3C1-204ENST00000564664 ZNRF2Q8NHG8 242 aa8.53□□□□□ -1.04
GTF3C1-204ENST00000564664 ZNF586Q9NXT0 402 aa8.53□□□□□ -1.04
GTF3C1-204ENST00000564664 PKHD1P08F94 4074 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 TRBV19A0A075B6N1 114 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 TRAV5A0A0B4J249 113 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 NBDYA0A0U1RRE5 68 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 SNURFLB1AK76 121 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 RLN2P04090 185 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 SLC25A5P05141 298 aaKnown RBP8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 NMBP08949 121 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 SNRPCP09234 159 aaKnown RBP8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 CT45A10P0DMU9 189 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 M6PRP20645 277 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 S100A10P60903 97 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 RAB32Q13637 225 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 CLINT1Q14677 625 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 RXFP4Q8TDU9 374 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 LINC00467Q9BRT7 94 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 SLC25A31Q9H0C2 315 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 GPN1Q9HCN4 374 aaPredicted RBP8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 TIMM9Q9Y5J7 89 aa8.52□□□□□ -1.05
GTF3C1-204ENST00000564664 UBE2L5PA0A1B0GUS4 154 aa8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 IGSF23A1L1A6 192 aa8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 H3BTX0 84 aa8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 BTF3P20290 206 aaKnown RBP8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 FGF7P21781 194 aa8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 KIR3DS1Q14943 382 aa8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 ZNF680Q8NEM1 530 aa8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 RNF141Q8WVD5 230 aa8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 GNPNAT1Q96EK6 184 aaPredicted RBP8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 LINC00588Q9Y4M8 146 aa8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 PCLOQ9Y6V0 5065 aa8.51□□□□□ -1.05
GTF3C1-204ENST00000564664 TRAV12-3A0A0B4J271 114 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 CYCSP99999 105 aaKnown RBP8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 OR5I1Q13606 314 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 SSX7Q7RTT5 188 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 AKAP14Q86UN6 197 aa8.5□□□□□ -1.05
GTF3C1-204ENST00000564664 C6orf223Q8N319 242 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms