RNA–Protein interactions for RNA: ENST00000564421.1

CPNE7-207, Transcript of copine 7, humanhuman

TSL 3

Gene CPNE7, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-207ENST00000564421 HLA-DMBP28068 263 aa12.75□□□□□ -0.37
CPNE7-207ENST00000564421 CMC4P56277 68 aaPredicted RBP12.75□□□□□ -0.37
CPNE7-207ENST00000564421 ICAM4Q14773 271 aa12.75□□□□□ -0.37
CPNE7-207ENST00000564421 CST9LP1Q5W188 147 aa12.75□□□□□ -0.37
CPNE7-207ENST00000564421 RNF182Q8N6D2 247 aa12.75□□□□□ -0.37
CPNE7-207ENST00000564421 TUBA4BQ9H853 241 aa12.75□□□□□ -0.37
CPNE7-207ENST00000564421 OTORQ9NRC9 128 aa12.75□□□□□ -0.37
CPNE7-207ENST00000564421 CLEC5AQ9NY25 188 aa12.75□□□□□ -0.37
CPNE7-207ENST00000564421 ARL2-SNX15V9GYD0 113 aa12.75□□□□□ -0.37
CPNE7-207ENST00000564421 PMS2P11Q13670 270 aa12.74□□□□□ -0.37
CPNE7-207ENST00000564421 HAGHQ16775 308 aa12.74□□□□□ -0.37
CPNE7-207ENST00000564421 DEFB125Q8N687 156 aa12.74□□□□□ -0.37
CPNE7-207ENST00000564421 C20orf173Q96LM9 149 aa12.74□□□□□ -0.37
CPNE7-207ENST00000564421 NKX6-2Q9C056 277 aaPredicted RBP12.74□□□□□ -0.37
CPNE7-207ENST00000564421 PRELID1Q9Y255 219 aa12.74□□□□□ -0.37
CPNE7-207ENST00000564421 NHLRC4P0CG21 123 aaPredicted RBP12.73□□□□□ -0.37
CPNE7-207ENST00000564421 SUMO1P63165 101 aaKnown RBP12.73□□□□□ -0.37
CPNE7-207ENST00000564421 PSG3Q16557 428 aa12.73□□□□□ -0.37
CPNE7-207ENST00000564421 ODF3L2Q3SX64 289 aa12.73□□□□□ -0.37
CPNE7-207ENST00000564421 PSMG4Q5JS54 123 aa12.73□□□□□ -0.37
CPNE7-207ENST00000564421 WFDC10AQ9H1F0 79 aa12.73□□□□□ -0.37
CPNE7-207ENST00000564421 DNAH9Q9NYC9 4486 aa12.73□□□□□ -0.37
CPNE7-207ENST00000564421 RBFOX3A6NFN3 312 aa12.72□□□□□ -0.37
CPNE7-207ENST00000564421 GGTLC3B5MD39 225 aa12.72□□□□□ -0.37
CPNE7-207ENST00000564421 M0R3E3 92 aa12.72□□□□□ -0.37
CPNE7-207ENST00000564421 SLC25A5P05141 298 aaKnown RBP12.72□□□□□ -0.37
CPNE7-207ENST00000564421 BCL2P10415 239 aa12.72□□□□□ -0.37
CPNE7-207ENST00000564421 ATP5G3P48201 142 aa12.72□□□□□ -0.37
CPNE7-207ENST00000564421 DEFB131AP59861 70 aa12.72□□□□□ -0.37
CPNE7-207ENST00000564421 LINC00322Q6ZN03 302 aaPredicted RBP12.72□□□□□ -0.37
CPNE7-207ENST00000564421 ZNF738Q8NE65 137 aa12.72□□□□□ -0.37
CPNE7-207ENST00000564421 CMTM2Q8TAZ6 248 aa12.72□□□□□ -0.37
CPNE7-207ENST00000564421 SRD5A3Q9H8P0 318 aa12.72□□□□□ -0.37
CPNE7-207ENST00000564421 ZNF705FA8MVS1 300 aaPredicted RBP12.71□□□□□ -0.37
CPNE7-207ENST00000564421 C11orf94C9JXX5 98 aa12.71□□□□□ -0.37
CPNE7-207ENST00000564421 TAGLN2P37802 199 aaKnown RBP12.71□□□□□ -0.37
CPNE7-207ENST00000564421 CSN1S1P47710 185 aa12.71□□□□□ -0.37
CPNE7-207ENST00000564421 MRPL53Q96EL3 112 aaKnown RBP12.71□□□□□ -0.37
CPNE7-207ENST00000564421 FAM210AQ96ND0 272 aa12.71□□□□□ -0.37
CPNE7-207ENST00000564421 RARRES2Q99969 163 aa12.71□□□□□ -0.37
CPNE7-207ENST00000564421 MAP6D1Q9H9H5 199 aa12.71□□□□□ -0.37
CPNE7-207ENST00000564421 VAX2Q9UIW0 290 aa12.71□□□□□ -0.37
CPNE7-207ENST00000564421 COL7A1Q02388 2944 aa12.7□□□□□ -0.38
CPNE7-207ENST00000564421 LOC102723971A0A1B0GUV8 181 aa12.7□□□□□ -0.38
CPNE7-207ENST00000564421 PRB4P10163 310 aaPredicted RBP12.7□□□□□ -0.38
CPNE7-207ENST00000564421 TOR2AQ5JU69 321 aa12.7□□□□□ -0.38
CPNE7-207ENST00000564421 SBSPONQ8IVN8 264 aa12.7□□□□□ -0.38
CPNE7-207ENST00000564421 C5orf17Q8NAS9 161 aa12.7□□□□□ -0.38
CPNE7-207ENST00000564421 RXFP4Q8TDU9 374 aa12.7□□□□□ -0.38
CPNE7-207ENST00000564421 RPUSD4Q96CM3 377 aaKnown RBP12.7□□□□□ -0.38
CPNE7-207ENST00000564421 EIF5A2Q9GZV4 153 aaKnown RBP12.7□□□□□ -0.38
CPNE7-207ENST00000564421 RPH3ALQ9UNE2 315 aa12.7□□□□□ -0.38
CPNE7-207ENST00000564421 AGRNO00468 2067 aa12.69□□□□□ -0.38
CPNE7-207ENST00000564421 RBMY1BA6NDE4 496 aaKnown RBP12.69□□□□□ -0.38
CPNE7-207ENST00000564421 RBMY1EA6NEQ0 496 aaKnown RBP12.69□□□□□ -0.38
CPNE7-207ENST00000564421 RBMY1DP0C7P1 496 aaKnown RBP12.69□□□□□ -0.38
CPNE7-207ENST00000564421 GNG5P63218 68 aa12.69□□□□□ -0.38
CPNE7-207ENST00000564421 MEF2BQ02080 365 aaPredicted RBP12.69□□□□□ -0.38
CPNE7-207ENST00000564421 ZNF506Q5JVG8 444 aa12.69□□□□□ -0.38
CPNE7-207ENST00000564421 CCDC28AQ8IWP9 274 aa12.69□□□□□ -0.38
CPNE7-207ENST00000564421 ASCL2Q99929 193 aa12.69□□□□□ -0.38
CPNE7-207ENST00000564421 TXNDC17Q9BRA2 123 aa12.69□□□□□ -0.38
CPNE7-207ENST00000564421 PRAC2D3DTV9 90 aa12.68□□□□□ -0.38
CPNE7-207ENST00000564421 DEFB1P60022 68 aa12.68□□□□□ -0.38
CPNE7-207ENST00000564421 APRG1Q8IVJ8 170 aa12.68□□□□□ -0.38
CPNE7-207ENST00000564421 ARL6IP6Q8N6S5 226 aa12.68□□□□□ -0.38
CPNE7-207ENST00000564421 CITED4Q96RK1 184 aa12.68□□□□□ -0.38
CPNE7-207ENST00000564421 EPDR1Q9UM22 224 aa12.68□□□□□ -0.38
CPNE7-207ENST00000564421 LOC102724200A0A096LPH7 203 aaPredicted RBP12.67□□□□□ -0.38
CPNE7-207ENST00000564421 DIRC3C9JPN6 131 aa12.67□□□□□ -0.38
CPNE7-207ENST00000564421 F6UB75 175 aa12.67□□□□□ -0.38
CPNE7-207ENST00000564421 ZNF124Q15973 351 aa12.67□□□□□ -0.38
CPNE7-207ENST00000564421 EBLN2Q6P2I7 272 aa12.67□□□□□ -0.38
CPNE7-207ENST00000564421 TM2D3Q9BRN9 247 aa12.67□□□□□ -0.38
CPNE7-207ENST00000564421 TCEAL7Q9BRU2 100 aa12.67□□□□□ -0.38
CPNE7-207ENST00000564421 KNCNA6PVL3 124 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 F6UZH7 168 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 PEX7O00628 323 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 TCRAP04437 139 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 ZNF705DP0CH99 300 aaPredicted RBP12.66□□□□□ -0.38
CPNE7-207ENST00000564421 ZNF705BP0CI00 300 aaPredicted RBP12.66□□□□□ -0.38
CPNE7-207ENST00000564421 PEA15Q15121 130 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 FOXI2Q6ZQN5 318 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 GOLT1AQ6ZVE7 132 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 OR8A1Q8NGG7 326 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 OR10J6PQ8NGY7 276 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 HIST1H2BAQ96A08 127 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 ATG101Q9BSB4 218 aa12.66□□□□□ -0.38
CPNE7-207ENST00000564421 SAV1Q9H4B6 383 aaPredicted RBP12.66□□□□□ -0.38
CPNE7-207ENST00000564421 IGKV2-40A0A087WW87 121 aaPredicted RBP12.65□□□□□ -0.38
CPNE7-207ENST00000564421 SCO2A0A1W2PP80 73 aa12.65□□□□□ -0.38
CPNE7-207ENST00000564421 K7EQM0 130 aa12.65□□□□□ -0.38
CPNE7-207ENST00000564421 PDE6DO43924 150 aa12.65□□□□□ -0.38
CPNE7-207ENST00000564421 IGKV2D-40P01614 121 aaPredicted RBP12.65□□□□□ -0.38
CPNE7-207ENST00000564421 HIST1H1AQ02539 215 aaPredicted RBP12.65□□□□□ -0.38
CPNE7-207ENST00000564421 ACTL10Q5JWF8 245 aa12.65□□□□□ -0.38
CPNE7-207ENST00000564421 GDF5OSQ5U4N7 250 aa12.65□□□□□ -0.38
CPNE7-207ENST00000564421 CYB561D1Q8N8Q1 229 aa12.65□□□□□ -0.38
CPNE7-207ENST00000564421 ZMAT4Q9H898 229 aa12.65□□□□□ -0.38
CPNE7-207ENST00000564421 MED9Q9NWA0 146 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms