RNA–Protein interactions for RNA: ENST00000564067.5

TRAF7-202, Transcript of TNF receptor associated factor 7, humanhuman

TSL 3

Gene TRAF7, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7-202ENST00000564067 LINC00869P0C866 280 aa11.84□□□□□ -0.51
TRAF7-202ENST00000564067 PRB4P10163 310 aaPredicted RBP11.84□□□□□ -0.51
TRAF7-202ENST00000564067 VGLL1Q99990 258 aa11.84□□□□□ -0.51
TRAF7-202ENST00000564067 MRPL32Q9BYC8 188 aaKnown RBP11.84□□□□□ -0.51
TRAF7-202ENST00000564067 PRR13Q9NZ81 148 aa11.84□□□□□ -0.51
TRAF7-202ENST00000564067 FAAP20Q6NZ36 180 aa11.83□□□□□ -0.52
TRAF7-202ENST00000564067 EIF4E3Q8N5X7 224 aaKnown RBP11.83□□□□□ -0.52
TRAF7-202ENST00000564067 OR51S1Q8NGJ8 323 aa11.83□□□□□ -0.52
TRAF7-202ENST00000564067 PCNPQ8WW12 178 aaKnown RBP11.83□□□□□ -0.52
TRAF7-202ENST00000564067 C8orf49Q96NF6 230 aa11.83□□□□□ -0.52
TRAF7-202ENST00000564067 EXTL2Q9UBQ6 330 aa11.83□□□□□ -0.52
TRAF7-202ENST00000564067 BOLA1Q9Y3E2 137 aa11.83□□□□□ -0.52
TRAF7-202ENST00000564067 DUXBA0A1W2PPF3 345 aa11.82□□□□□ -0.52
TRAF7-202ENST00000564067 MRPS12O15235 138 aaKnown RBP11.82□□□□□ -0.52
TRAF7-202ENST00000564067 IGHV3-53P01767 116 aa11.82□□□□□ -0.52
TRAF7-202ENST00000564067 CT45A10P0DMU9 189 aa11.82□□□□□ -0.52
TRAF7-202ENST00000564067 TCL1AP56279 114 aa11.82□□□□□ -0.52
TRAF7-202ENST00000564067 MRPS10P82664 201 aaKnown RBP11.82□□□□□ -0.52
TRAF7-202ENST00000564067 FHL2Q14192 279 aa11.82□□□□□ -0.52
TRAF7-202ENST00000564067 IBA57Q5T440 356 aaKnown RBP11.82□□□□□ -0.52
TRAF7-202ENST00000564067 TEPPQ6URK8 271 aa11.82□□□□□ -0.52
TRAF7-202ENST00000564067 AP3S1Q92572 193 aa11.82□□□□□ -0.52
TRAF7-202ENST00000564067 YIPF6Q96EC8 236 aa11.82□□□□□ -0.52
TRAF7-202ENST00000564067 TXNDC17Q9BRA2 123 aa11.82□□□□□ -0.52
TRAF7-202ENST00000564067 RCL1Q9Y2P8 373 aaKnown RBP11.82□□□□□ -0.52
TRAF7-202ENST00000564067 PXMP4Q9Y6I8 212 aa11.82□□□□□ -0.52
TRAF7-202ENST00000564067 PRAC2D3DTV9 90 aa11.81□□□□□ -0.52
TRAF7-202ENST00000564067 K7EQD1 137 aa11.81□□□□□ -0.52
TRAF7-202ENST00000564067 ORM1P02763 201 aa11.81□□□□□ -0.52
TRAF7-202ENST00000564067 SLC25A6P12236 298 aa11.81□□□□□ -0.52
TRAF7-202ENST00000564067 ZNF415Q09FC8 603 aa11.81□□□□□ -0.52
TRAF7-202ENST00000564067 KLF12Q9Y4X4 402 aa11.81□□□□□ -0.52
TRAF7-202ENST00000564067 SMCO3A2RU48 225 aa11.8□□□□□ -0.52
TRAF7-202ENST00000564067 C7orf71A4D174 169 aa11.8□□□□□ -0.52
TRAF7-202ENST00000564067 SYNGR2O43760 224 aa11.8□□□□□ -0.52
TRAF7-202ENST00000564067 AKAIN1P0CW23 69 aa11.8□□□□□ -0.52
TRAF7-202ENST00000564067 TDRG1Q3Y452 100 aa11.8□□□□□ -0.52
TRAF7-202ENST00000564067 PXDC1Q5TGL8 231 aa11.8□□□□□ -0.52
TRAF7-202ENST00000564067 BPIFA4PQ86YQ2 179 aa11.8□□□□□ -0.52
TRAF7-202ENST00000564067 ARL6Q9H0F7 186 aa11.8□□□□□ -0.52
TRAF7-202ENST00000564067 ARV1Q9H2C2 271 aa11.8□□□□□ -0.52
TRAF7-202ENST00000564067 TRGV4A0A0C4DH28 118 aa11.79□□□□□ -0.52
TRAF7-202ENST00000564067 IGHV3-38A0A0C4DH36 116 aa11.79□□□□□ -0.52
TRAF7-202ENST00000564067 IBA57-AS1B1ANH7 110 aa11.79□□□□□ -0.52
TRAF7-202ENST00000564067 E5RGE8 158 aa11.79□□□□□ -0.52
TRAF7-202ENST00000564067 WRBO00258 174 aa11.79□□□□□ -0.52
TRAF7-202ENST00000564067 SPANXN5Q5MJ07 72 aa11.79□□□□□ -0.52
TRAF7-202ENST00000564067 IQCF2Q8IXL9 164 aa11.79□□□□□ -0.52
TRAF7-202ENST00000564067 VCX3AQ9NNX9 186 aa11.79□□□□□ -0.52
TRAF7-202ENST00000564067 SCP2D1Q9UJQ7 156 aa11.79□□□□□ -0.52
TRAF7-202ENST00000564067 STRAPQ9Y3F4 350 aaKnown RBP11.79□□□□□ -0.52
TRAF7-202ENST00000564067 LINC00854A0A1B0GVQ3 168 aa11.78□□□□□ -0.52
TRAF7-202ENST00000564067 ASAH1Q13510 395 aa11.78□□□□□ -0.52
TRAF7-202ENST00000564067 SH2D6Q7Z4S9 175 aa11.78□□□□□ -0.52
TRAF7-202ENST00000564067 RS1O15537 224 aa11.77□□□□□ -0.53
TRAF7-202ENST00000564067 MPDU1O75352 247 aa11.77□□□□□ -0.53
TRAF7-202ENST00000564067 GYPEP15421 78 aa11.77□□□□□ -0.53
TRAF7-202ENST00000564067 KRTAP10-4P60372 401 aaPredicted RBP11.77□□□□□ -0.53
TRAF7-202ENST00000564067 NCS1P62166 190 aa11.77□□□□□ -0.53
TRAF7-202ENST00000564067 LINC01556Q5JQF7 62 aa11.77□□□□□ -0.53
TRAF7-202ENST00000564067 LINC00305Q7Z4B0 112 aa11.77□□□□□ -0.53
TRAF7-202ENST00000564067 CLVS1Q8IUQ0 354 aaPredicted RBP11.77□□□□□ -0.53
TRAF7-202ENST00000564067 TM2D2Q9BX73 214 aa11.77□□□□□ -0.53
TRAF7-202ENST00000564067 MRPL16Q9NX20 251 aaKnown RBP11.77□□□□□ -0.53
TRAF7-202ENST00000564067 KLLNB2CW77 178 aa11.76□□□□□ -0.53
TRAF7-202ENST00000564067 C9JCJ5 164 aa11.76□□□□□ -0.53
TRAF7-202ENST00000564067 K7EPK0 472 aa11.76□□□□□ -0.53
TRAF7-202ENST00000564067 PATE2Q6UY27 113 aa11.76□□□□□ -0.53
TRAF7-202ENST00000564067 SCXQ7RTU7 201 aa11.76□□□□□ -0.53
TRAF7-202ENST00000564067 Q9HAA7 133 aa11.76□□□□□ -0.53
TRAF7-202ENST00000564067 SLC17A3O00476 420 aa11.75□□□□□ -0.53
TRAF7-202ENST00000564067 RGS13O14921 159 aa11.75□□□□□ -0.53
TRAF7-202ENST00000564067 ATP6V1G2O95670 118 aa11.75□□□□□ -0.53
TRAF7-202ENST00000564067 SNRPCP09234 159 aaKnown RBP11.75□□□□□ -0.53
TRAF7-202ENST00000564067 TIRAPP58753 221 aa11.75□□□□□ -0.53
TRAF7-202ENST00000564067 VBP1P61758 197 aa11.75□□□□□ -0.53
TRAF7-202ENST00000564067 GUK1Q16774 197 aa11.75□□□□□ -0.53
TRAF7-202ENST00000564067 LINC00477Q96M19 166 aa11.75□□□□□ -0.53
TRAF7-202ENST00000564067 ARPC5LQ9BPX5 153 aa11.75□□□□□ -0.53
TRAF7-202ENST00000564067 NPVFQ9HCQ7 196 aa11.75□□□□□ -0.53
TRAF7-202ENST00000564067 H3BP45 60 aa11.74□□□□□ -0.53
TRAF7-202ENST00000564067 ACOT6Q3I5F7 207 aaPredicted RBP11.74□□□□□ -0.53
TRAF7-202ENST00000564067 MORN5Q5VZ52 161 aa11.74□□□□□ -0.53
TRAF7-202ENST00000564067 SMIM4Q8WVI0 70 aa11.74□□□□□ -0.53
TRAF7-202ENST00000564067 SAT2Q96F10 170 aaPredicted RBP11.74□□□□□ -0.53
TRAF7-202ENST00000564067 FNDC10F2Z333 226 aa11.73□□□□□ -0.53
TRAF7-202ENST00000564067 NMBP08949 121 aa11.73□□□□□ -0.53
TRAF7-202ENST00000564067 IGLC2P0DOY2 106 aa11.73□□□□□ -0.53
TRAF7-202ENST00000564067 RNASE4P34096 147 aaKnown RBP11.73□□□□□ -0.53
TRAF7-202ENST00000564067 MRPL53Q96EL3 112 aaKnown RBP11.73□□□□□ -0.53
TRAF7-202ENST00000564067 CHAC1Q9BUX1 264 aa11.73□□□□□ -0.53
TRAF7-202ENST00000564067 PKHD1L1Q86WI1 4243 aa11.72□□□□□ -0.53
TRAF7-202ENST00000564067 TRAV8-6A0A0B4J262 113 aa11.72□□□□□ -0.53
TRAF7-202ENST00000564067 H3BTX0 84 aa11.72□□□□□ -0.53
TRAF7-202ENST00000564067 GOSR2O14653 212 aa11.72□□□□□ -0.53
TRAF7-202ENST00000564067 GPX1P07203 203 aa11.72□□□□□ -0.53
TRAF7-202ENST00000564067 TNFSF8P32971 234 aa11.72□□□□□ -0.53
TRAF7-202ENST00000564067 POLR2GP62487 172 aaKnown RBP eCLIP11.72□□□□□ -0.53
TRAF7-202ENST00000564067 CD300CQ08708 224 aa11.72□□□□□ -0.53
TRAF7-202ENST00000564067 BTN1A1Q13410 526 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms