RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 FAM223BA6NKX1 122 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 BMPR1BO00238 502 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 TCRAP04437 139 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 PRB4P10163 310 aaPredicted RBP7.28□□□□□ -1.24
LINC00838-201ENST00000562956 TPPP2P59282 170 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 RPL15P61313 204 aaKnown RBP7.28□□□□□ -1.24
LINC00838-201ENST00000562956 SPATA45Q537H7 98 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 S100A7AQ86SG5 101 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 FAM223AQ8IWN6 122 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 TP53TG3Q9ULZ0 132 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 KLF12Q9Y4X4 402 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 V9GYV3 84 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 CSPG4Q6UVK1 2322 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 CR1P17927 2039 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 PMCHP20382 165 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 TMEM95Q3KNT9 176 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 MAJINQ3KP22 176 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 SIGLEC15Q6ZMC9 328 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 C20orf144Q9BQM9 153 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 VPS25Q9BRG1 176 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 KLK15Q9H2R5 256 aa7.28□□□□□ -1.24
LINC00838-201ENST00000562956 HELZ2Q9BYK8 2649 aaKnown RBP7.27□□□□□ -1.24
LINC00838-201ENST00000562956 CLPSL1A2RUU4 121 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 HNRNPA3P51991 378 aaKnown RBP7.27□□□□□ -1.25
LINC00838-201ENST00000562956 LINC00310P59036 64 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 UBE2G1P62253 170 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 FOXL1Q12952 345 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 KIAA1644Q3SXP7 199 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 ALKBH7Q9BT30 221 aaPredicted RBP7.27□□□□□ -1.25
LINC00838-201ENST00000562956 TP73-AS1Q9UF72 201 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 SELENOKQ9Y6D0 94 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 DIRC3C9JPN6 131 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 CRISP2P16562 243 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 SLC35B1P78383 322 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 TEX43Q6ZNM6 134 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 LCNL1Q6ZST4 164 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 C9orf139Q6ZV77 190 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 SMAD5-AS1Q9Y6J3 95 aa7.27□□□□□ -1.25
LINC00838-201ENST00000562956 TRAV8-1A0A0A6YYK1 113 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 TRBV12-3P01733 135 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 CFHR3Q02985 330 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 Q6YL49 198 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 GOLT1AQ6ZVE7 132 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 OR8I2Q8N0Y5 310 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 FMC1Q96HJ9 113 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 IL36BQ9NZH7 164 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 BRI3O95415 125 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 IGLV1-40P01703 118 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 IBA57Q5T440 356 aaKnown RBP7.26□□□□□ -1.25
LINC00838-201ENST00000562956 LYPD1Q8N2G4 141 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 OR4C5Q8NGB2 326 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 OSTCQ9NRP0 149 aa7.26□□□□□ -1.25
LINC00838-201ENST00000562956 TEX15Q9BXT5 2789 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 MXRA5Q9NR99 2828 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 IGHV3-66A0A0C4DH42 116 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 H3BUA1 57 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 M0R3E3 92 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 SMAD7O15105 426 aaKnown RBP7.25□□□□□ -1.25
LINC00838-201ENST00000562956 ZNF207O43670 478 aaKnown RBP7.25□□□□□ -1.25
LINC00838-201ENST00000562956 LTAP01374 205 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 IGLV2-11P01706 119 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 IGHV3-11P01762 117 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 APOHP02749 345 aaPredicted RBP7.25□□□□□ -1.25
LINC00838-201ENST00000562956 TYMSP04818 313 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 PF4V1P10720 104 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 RPL7P18124 248 aaKnown RBP7.25□□□□□ -1.25
LINC00838-201ENST00000562956 GPR82Q96P67 336 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 LAMTOR2Q9Y2Q5 125 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 PDZD2O15018 2839 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 CREBBPQ92793 2442 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 IGHV3OR16-13A0A075B7E8 117 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 IGHV3-74A0A0B4J1X5 117 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 BUB3O43684 328 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 ARL3P36405 182 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 PDE6HQ13956 83 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 PRR31Q5SQ13 230 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 PRR27Q6MZM9 219 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 Q71RC1 249 aaPredicted RBP7.25□□□□□ -1.25
LINC00838-201ENST00000562956 SIGLECL1Q8N7X8 197 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 MLST8Q9BVC4 326 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 MRPL18Q9H0U6 180 aaKnown RBP7.25□□□□□ -1.25
LINC00838-201ENST00000562956 VPREB3Q9UKI3 123 aa7.25□□□□□ -1.25
LINC00838-201ENST00000562956 PRRC2AP48634 2157 aaKnown RBP7.25□□□□□ -1.25
LINC00838-201ENST00000562956 HOXA3O43365 443 aaPredicted RBP7.24□□□□□ -1.25
LINC00838-201ENST00000562956 CA1P00915 261 aaPredicted RBP7.24□□□□□ -1.25
LINC00838-201ENST00000562956 NTF3P20783 257 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 AMTP48728 403 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 RPEL1Q2QD12 228 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 FAM19A2Q8N3H0 131 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 USMG5Q96IX5 58 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 ATP6V0BQ99437 205 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 SERTAD4Q9NUC0 356 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 IGHV3-49A0A0A0MS15 119 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 RAB9AP51151 201 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 VAMP3Q15836 100 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 LCN12Q6JVE5 192 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 LINC00322Q6ZN03 302 aaPredicted RBP7.24□□□□□ -1.25
LINC00838-201ENST00000562956 IL17RELQ6ZVW7 336 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 Q86TA4 180 aa7.24□□□□□ -1.25
LINC00838-201ENST00000562956 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms