RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 CCL19Q99731 98 aa0.06□□□□□ -2.4
CHD9-207ENST00000562806 PAIP2Q9BPZ3 127 aaKnown RBP0.06□□□□□ -2.4
CHD9-207ENST00000562806 PBDC1Q9BVG4 233 aa0.06□□□□□ -2.4
CHD9-207ENST00000562806 CST11Q9H112 138 aa0.06□□□□□ -2.4
CHD9-207ENST00000562806 SH3BGRL3Q9H299 93 aa0.06□□□□□ -2.4
CHD9-207ENST00000562806 PTPRFP10586 1907 aa0.06□□□□□ -2.4
CHD9-207ENST00000562806 TET1Q8NFU7 2136 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 CD109Q6YHK3 1445 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 MAST4O15021 2626 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 MUC4Q99102 2169 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 NAV2Q8IVL1 2488 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 E2F6O75461 281 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 PDE6GP18545 87 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 CAPZBP47756 277 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 MSMO1Q15800 293 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 DHRS4L2Q6PKH6 230 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 SPINK6Q6UWN8 80 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 PHF5AQ7RTV0 110 aaKnown RBP0.05□□□□□ -2.4
CHD9-207ENST00000562806 PXT1Q8NFP0 134 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 CHMP6Q96FZ7 201 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 CEP19Q96LK0 163 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 LIMD2Q9BT23 127 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 MYO18AQ92614 2054 aaKnown RBP0.05□□□□□ -2.4
CHD9-207ENST00000562806 PIK3C2AO00443 1686 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 DOCK4Q8N1I0 1966 aa0.05□□□□□ -2.4
CHD9-207ENST00000562806 CAMSAP2Q08AD1 1489 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 HEATR1Q9H583 2144 aaKnown RBP0.04□□□□□ -2.4
CHD9-207ENST00000562806 UNC13CQ8NB66 2214 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 ODAMA1E959 279 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 A6NN06 94 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 CST7O76096 145 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 RPL35P42766 123 aaKnown RBP0.04□□□□□ -2.4
CHD9-207ENST00000562806 RPL37AP61513 92 aaKnown RBP0.04□□□□□ -2.4
CHD9-207ENST00000562806 ARF6P62330 175 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 HBBP68871 147 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 DIAPH2-AS1Q14236 149 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 SNCBQ16143 134 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 VMA21Q3ZAQ7 101 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 FKBP1CQ5VVH2 108 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 C1orf140Q5VVS0 124 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 PRR15Q8IV56 129 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 C5orf17Q8NAS9 161 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 GRPEL2Q8TAA5 225 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 NABP2Q9BQ15 211 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 RTL8AQ9BWD3 113 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 OR2H1Q9GZK4 316 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 CTTNBP2Q8WZ74 1663 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 FANCMQ8IYD8 2048 aa0.04□□□□□ -2.4
CHD9-207ENST00000562806 ANKRD17O75179 2603 aaKnown RBP0.03□□□□□ -2.4
CHD9-207ENST00000562806 ADGBQ8N7X0 1667 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 SULT1C4O75897 302 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 PIAS1O75925 651 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 ATP5HO75947 161 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 IFNA1P01562 189 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 IGHV3-30P01768 117 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 IGHV3-30-5P0DP03 117 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 PPP1R2P41236 205 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 CAV3P56539 151 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 MRPS36P82909 103 aaKnown RBP0.03□□□□□ -2.4
CHD9-207ENST00000562806 RTL8BQ17RB0 113 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 HACD4Q5VWC8 232 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 C10orf99Q6UWK7 81 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 CASC2Q6XLA1 102 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 ZCCHC23Q6ZST2 131 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 CROCCP2Q86T23 111 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 LINC00269Q8N2A0 174 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 OR13C6PQ8NH95 151 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 NEK7Q8TDX7 302 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 MCEEQ96PE7 176 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 OR4C12Q96R67 309 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 GINS3Q9BRX5 216 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 EFCAB11Q9BUY7 163 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 SS18L2Q9UHA2 77 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 LAMTOR3Q9UHA4 124 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 NAT8BQ9UHF3 227 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 TPRKBQ9Y3C4 175 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 DSTQ03001 7570 aaKnown RBP0.03□□□□□ -2.4
CHD9-207ENST00000562806 RTL9Q8NET4 1388 aa0.03□□□□□ -2.4
CHD9-207ENST00000562806 PTPRDP23468 1912 aa0.03□□□□□ -2.41
CHD9-207ENST00000562806 FREM3P0C091 2139 aa0.02□□□□□ -2.41
CHD9-207ENST00000562806 H3BQV1 296 aa0.02□□□□□ -2.41
CHD9-207ENST00000562806 MT-ND6P03923 174 aa0.02□□□□□ -2.41
CHD9-207ENST00000562806 CSN2P05814 226 aa0.02□□□□□ -2.41
CHD9-207ENST00000562806 SPINK13Q1W4C9 94 aa0.02□□□□□ -2.41
CHD9-207ENST00000562806 LPAR5Q9H1C0 372 aa0.02□□□□□ -2.41
CHD9-207ENST00000562806 TAF9BQ9HBM6 251 aa0.02□□□□□ -2.41
CHD9-207ENST00000562806 KIAA1107Q9UPP5 1409 aa0.02□□□□□ -2.41
CHD9-207ENST00000562806 TNCP24821 2201 aa0.02□□□□□ -2.41
CHD9-207ENST00000562806 USP54Q70EL1 1684 aa0.02□□□□□ -2.41
CHD9-207ENST00000562806 PRORSD1PA6NEY8 169 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 KPNA4O00629 521 aaPredicted RBP0.01□□□□□ -2.41
CHD9-207ENST00000562806 MFSD11O43934 449 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 FABP4P15090 132 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 RPL19P84098 196 aaKnown RBP0.01□□□□□ -2.41
CHD9-207ENST00000562806 POU6F1Q14863 301 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 NEDD8Q15843 81 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 XAF1Q6GPH4 301 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 TMED4Q7Z7H5 227 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 OR4B1Q8NGF8 309 aa0.01□□□□□ -2.41
CHD9-207ENST00000562806 CCL4L1Q8NHW4 92 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms