RNA–Protein interactions for RNA: ENST00000561442.5

USP3-221, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-221ENST00000561442 NKX6-2Q9C056 277 aaPredicted RBP10.54□□□□□ -0.72
USP3-221ENST00000561442 CSTL1Q9H114 145 aa10.54□□□□□ -0.72
USP3-221ENST00000561442 RPRMQ9NS64 109 aa10.54□□□□□ -0.72
USP3-221ENST00000561442 DNAH7Q8WXX0 4024 aa10.54□□□□□ -0.72
USP3-221ENST00000561442 H3BMM0 161 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 HLA-DRB4P13762 266 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 RHOBP62745 196 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 FAM122CQ6P4D5 195 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 FOXI2Q6ZQN5 318 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 ZNF738Q8NE65 137 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 OR2G3Q8NGZ4 309 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 BLNKQ8WV28 456 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 SAV1Q9H4B6 383 aaPredicted RBP10.53□□□□□ -0.72
USP3-221ENST00000561442 ZNF586Q9NXT0 402 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 TMEM14CQ9P0S9 112 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 HLA-DRB4X5D2U9 266 aa10.53□□□□□ -0.72
USP3-221ENST00000561442 UBE2CO00762 179 aa10.52□□□□□ -0.73
USP3-221ENST00000561442 OR7C2O60412 319 aa10.52□□□□□ -0.73
USP3-221ENST00000561442 ZNF705DP0CH99 300 aaPredicted RBP10.52□□□□□ -0.73
USP3-221ENST00000561442 ZNF705BP0CI00 300 aaPredicted RBP10.52□□□□□ -0.73
USP3-221ENST00000561442 HIST1H1EP10412 219 aaKnown RBP10.52□□□□□ -0.73
USP3-221ENST00000561442 SERF2P84101 59 aa10.52□□□□□ -0.73
USP3-221ENST00000561442 AKR1C8PQ5T2L2 129 aa10.52□□□□□ -0.73
USP3-221ENST00000561442 EBLN2Q6P2I7 272 aa10.52□□□□□ -0.73
USP3-221ENST00000561442 OR4B1Q8NGF8 309 aa10.52□□□□□ -0.73
USP3-221ENST00000561442 OR10G4Q8NGN3 311 aa10.52□□□□□ -0.73
USP3-221ENST00000561442 OR10G9Q8NGN4 311 aa10.52□□□□□ -0.73
USP3-221ENST00000561442 OR10G7Q8NGN6 311 aa10.52□□□□□ -0.73
USP3-221ENST00000561442 PAXXQ9BUH6 204 aa10.52□□□□□ -0.73
USP3-221ENST00000561442 ZNF331Q9NQX6 463 aaPredicted RBP10.52□□□□□ -0.73
USP3-221ENST00000561442 TRBV19A0A075B6N1 114 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 TRAV1-1A0A0B4J248 108 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 A0A0J9YX75 114 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 HMGB3O15347 200 aaKnown RBP10.51□□□□□ -0.73
USP3-221ENST00000561442 SCO1O75880 301 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 OR10J4P0C629 311 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 FXYD7P58549 80 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 BTN1A1Q13410 526 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 PSG3Q16557 428 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 GUK1Q16774 197 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 OVOL2Q9BRP0 275 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 SLC50A1Q9BRV3 221 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 OR51M1Q9H341 326 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 PLA2G2EQ9NZK7 142 aa10.51□□□□□ -0.73
USP3-221ENST00000561442 A0A1W2PPV4 95 aa10.5□□□□□ -0.73
USP3-221ENST00000561442 ZNF705FA8MVS1 300 aaPredicted RBP10.5□□□□□ -0.73
USP3-221ENST00000561442 SPRY2O43597 315 aa10.5□□□□□ -0.73
USP3-221ENST00000561442 NDUFS6O75380 124 aaKnown RBP10.5□□□□□ -0.73
USP3-221ENST00000561442 GIG44P09565 113 aaPredicted RBP10.5□□□□□ -0.73
USP3-221ENST00000561442 KHDC3LQ587J8 217 aa10.5□□□□□ -0.73
USP3-221ENST00000561442 MORN3Q6PF18 240 aaPredicted RBP10.5□□□□□ -0.73
USP3-221ENST00000561442 Q6ZWC4 215 aa10.5□□□□□ -0.73
USP3-221ENST00000561442 RPUSD4Q96CM3 377 aaKnown RBP10.5□□□□□ -0.73
USP3-221ENST00000561442 FXYD5Q96DB9 178 aa10.5□□□□□ -0.73
USP3-221ENST00000561442 ZNF503Q96F45 646 aa10.5□□□□□ -0.73
USP3-221ENST00000561442 CLEC5AQ9NY25 188 aa10.5□□□□□ -0.73
USP3-221ENST00000561442 PRAC2D3DTV9 90 aa10.49□□□□□ -0.73
USP3-221ENST00000561442 NDUFB4O95168 129 aa10.49□□□□□ -0.73
USP3-221ENST00000561442 NBEAP1P0C6P0 100 aa10.49□□□□□ -0.73
USP3-221ENST00000561442 SFTA3P0C7M3 94 aa10.49□□□□□ -0.73
USP3-221ENST00000561442 ADCYAP1P18509 176 aa10.49□□□□□ -0.73
USP3-221ENST00000561442 TAS2R45P59539 299 aa10.49□□□□□ -0.73
USP3-221ENST00000561442 UBE2L3P68036 154 aaKnown RBP10.49□□□□□ -0.73
USP3-221ENST00000561442 HIST1H1AQ02539 215 aaPredicted RBP10.49□□□□□ -0.73
USP3-221ENST00000561442 RPP25LQ8N5L8 163 aaKnown RBP10.49□□□□□ -0.73
USP3-221ENST00000561442 RNF183Q96D59 192 aa10.49□□□□□ -0.73
USP3-221ENST00000561442 TMA7Q9Y2S6 64 aaKnown RBP10.49□□□□□ -0.73
USP3-221ENST00000561442 MBP02144 154 aa10.48□□□□□ -0.73
USP3-221ENST00000561442 H2AFB1P0C5Y9 115 aa10.48□□□□□ -0.73
USP3-221ENST00000561442 CDC34P49427 236 aaPredicted RBP10.48□□□□□ -0.73
USP3-221ENST00000561442 CNN1P51911 297 aaKnown RBP10.48□□□□□ -0.73
USP3-221ENST00000561442 PMS2P11Q13670 270 aa10.48□□□□□ -0.73
USP3-221ENST00000561442 TMEM41BQ5BJD5 291 aa10.48□□□□□ -0.73
USP3-221ENST00000561442 EXOC3-AS1Q8N2X6 119 aa10.48□□□□□ -0.73
USP3-221ENST00000561442 OR8A1Q8NGG7 326 aa10.48□□□□□ -0.73
USP3-221ENST00000561442 FAM213BQ8TBF2 198 aa10.48□□□□□ -0.73
USP3-221ENST00000561442 SLC35B3Q9H1N7 401 aa10.48□□□□□ -0.73
USP3-221ENST00000561442 XCL2Q9UBD3 114 aa10.48□□□□□ -0.73
USP3-221ENST00000561442 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
USP3-221ENST00000561442 M0R3E3 92 aa10.47□□□□□ -0.73
USP3-221ENST00000561442 ZNF253O75346 499 aa10.47□□□□□ -0.73
USP3-221ENST00000561442 DUSP14O95147 198 aaKnown RBP10.47□□□□□ -0.73
USP3-221ENST00000561442 TAGLN2P37802 199 aaKnown RBP10.47□□□□□ -0.73
USP3-221ENST00000561442 NUTF2P61970 127 aaKnown RBP10.47□□□□□ -0.73
USP3-221ENST00000561442 PSG9Q00887 426 aa10.47□□□□□ -0.73
USP3-221ENST00000561442 PDE6HQ13956 83 aa10.47□□□□□ -0.73
USP3-221ENST00000561442 CLRN3Q8NCR9 226 aa10.47□□□□□ -0.73
USP3-221ENST00000561442 RAB24Q969Q5 203 aa10.47□□□□□ -0.73
USP3-221ENST00000561442 ARL14EPLP0DKL9 152 aa10.46□□□□□ -0.73
USP3-221ENST00000561442 RANP62826 216 aaKnown RBP10.46□□□□□ -0.73
USP3-221ENST00000561442 SRSF3P84103 164 aaKnown RBP10.46□□□□□ -0.73
USP3-221ENST00000561442 ICAM4Q14773 271 aa10.46□□□□□ -0.73
USP3-221ENST00000561442 SSX7Q7RTT5 188 aa10.46□□□□□ -0.73
USP3-221ENST00000561442 OR11H2Q8NH07 326 aa10.46□□□□□ -0.73
USP3-221ENST00000561442 MBD3L1Q8WWY6 194 aa10.46□□□□□ -0.73
USP3-221ENST00000561442 ACTR3CQ9C0K3 210 aaPredicted RBP10.46□□□□□ -0.73
USP3-221ENST00000561442 EIF5A2Q9GZV4 153 aaKnown RBP10.46□□□□□ -0.73
USP3-221ENST00000561442 AGRNO00468 2067 aa10.45□□□□□ -0.74
USP3-221ENST00000561442 RHEBQ15382 184 aa10.45□□□□□ -0.74
USP3-221ENST00000561442 ATRAIDQ6UW56 229 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 259.5 ms