RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 HLA-DRB4P13762 266 aa11.06□□□□□ -0.64
RABGGTA-220ENST00000560998 PRR31Q5SQ13 230 aa11.06□□□□□ -0.64
RABGGTA-220ENST00000560998 GEMIN7Q9H840 131 aaKnown RBP11.06□□□□□ -0.64
RABGGTA-220ENST00000560998 HLA-DRB4X5D2U9 266 aa11.06□□□□□ -0.64
RABGGTA-220ENST00000560998 LYNX1G3V0Z9 82 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 IGLV2-23P01705 113 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 LYNX1P0DP58 116 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 ERHP84090 104 aaKnown RBP11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 SRSF1Q07955 248 aaKnown RBP eCLIP11.05□□□□□ -0.644e-7■□□□□ 9.3
RABGGTA-220ENST00000560998 C5orf64Q2M2E5 130 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 ZNF493Q6ZR52 646 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 Q86TA4 180 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 TMEM133Q9H2Q1 129 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 OVOL3O00110 214 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 GCSHP23434 173 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 NMUP48645 174 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 ZNF672Q499Z4 452 aaPredicted RBP11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 CFAP161Q6P656 301 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 LCNL1Q6ZST4 164 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 LINC00305Q7Z4B0 112 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 BCL6BQ8N143 479 aaPredicted RBP11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 TTC9CQ8N5M4 171 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 TMEM116Q8NCL8 245 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 SPAG8Q99932 426 aaPredicted RBP11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 TM2D2Q9BX73 214 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 RALYQ9UKM9 306 aaKnown RBP11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 U3KQK5 164 aa11.05□□□□□ -0.64
RABGGTA-220ENST00000560998 ADORA2A-AS1P86434 159 aa11.04□□□□□ -0.64
RABGGTA-220ENST00000560998 LINC01559Q495D7 138 aa11.04□□□□□ -0.64
RABGGTA-220ENST00000560998 SPTA1P02549 2419 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 CGB1A6NKQ9 187 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 E7EUB6 86 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 FXYD2P54710 66 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 CDSNQ15517 529 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 MLANAQ16655 118 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 PCP2Q8IVA1 136 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 ZNF418Q8TF45 676 aaPredicted RBP11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 IFI27L1Q96BM0 104 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 CHAC1Q9BUX1 264 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 TAL2Q16559 108 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 ATP6V0E2Q8NHE4 81 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 C8orf46Q8TAG6 207 aa11.03□□□□□ -0.64
RABGGTA-220ENST00000560998 ANKHD1Q8IWZ3 2542 aaKnown RBP11.02□□□□□ -0.64
RABGGTA-220ENST00000560998 OR11H12B2RN74 326 aa11.02□□□□□ -0.65
RABGGTA-220ENST00000560998 IFI27P40305 119 aaPredicted RBP11.02□□□□□ -0.65
RABGGTA-220ENST00000560998 SUB1P53999 127 aaKnown RBP eCLIP11.02□□□□□ -0.65
RABGGTA-220ENST00000560998 WFDC2Q14508 124 aa11.02□□□□□ -0.65
RABGGTA-220ENST00000560998 C10orf55Q5SWW7 151 aa11.02□□□□□ -0.65
RABGGTA-220ENST00000560998 OR11H1Q8NG94 326 aa11.02□□□□□ -0.65
RABGGTA-220ENST00000560998 OR11H2Q8NH07 326 aa11.02□□□□□ -0.65
RABGGTA-220ENST00000560998 RITA1Q96K30 269 aa11.02□□□□□ -0.65
RABGGTA-220ENST00000560998 IGKV1D-37A0A075B6S9 117 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 FBLL1A6NHQ2 334 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 TSPAN13O95857 204 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 ARMS2P0C7Q2 107 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 HOXB4P17483 251 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 WT1-ASQ06250 92 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 MRGPRG-AS1Q2M3A8 158 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 VMA21Q3ZAQ7 101 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 CEND1Q8N111 149 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 SGK494Q96LW2 274 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 Q9H3A6 140 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 OTORQ9NRC9 128 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 F11RQ9Y624 299 aaKnown RBP11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 IGLL5B9A064 214 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 SLC25A17O43808 307 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 GP9P14770 177 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 DLX1P56177 255 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 PAX8Q06710 450 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 GAGE13Q4V321 117 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 ZNF479Q96JC4 524 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 TPSG1Q9NRR2 321 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 CYSLTR1Q9Y271 337 aa11.01□□□□□ -0.65
RABGGTA-220ENST00000560998 IGLV1-47P01700 117 aa11□□□□□ -0.65
RABGGTA-220ENST00000560998 KLRD1Q13241 179 aa11□□□□□ -0.65
RABGGTA-220ENST00000560998 ORMDL3Q8N138 153 aa11□□□□□ -0.65
RABGGTA-220ENST00000560998 NPIPB3Q92617 1050 aa11□□□□□ -0.65
RABGGTA-220ENST00000560998 MALRD1Q5VYJ5 2156 aa11□□□□□ -0.65
RABGGTA-220ENST00000560998 IGHV3-72A0A0B4J1Y9 119 aa10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 ENSAO43768 121 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 SSBP2P81877 361 aaPredicted RBP10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 PRELID3AQ96N28 172 aa10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 ZMAT4Q9H898 229 aa10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 RBP4P02753 201 aa10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 ETDBQ3ZM63 59 aa10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 C8orf86Q6ZUL3 223 aa10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 SRSF12Q8WXF0 261 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 C18orf15Q96N68 181 aa10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 NHP2Q9NX24 153 aaKnown RBP10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 PRO0461Q9UI25 63 aa10.99□□□□□ -0.65
RABGGTA-220ENST00000560998 A0A1W2PPI3 338 aa10.98□□□□□ -0.65
RABGGTA-220ENST00000560998 D6R8Y8 96 aa10.98□□□□□ -0.65
RABGGTA-220ENST00000560998 BUB1B-PAK6H3BSN5 160 aa10.98□□□□□ -0.65
RABGGTA-220ENST00000560998 NDUFS7O75251 213 aa10.98□□□□□ -0.65
RABGGTA-220ENST00000560998 PRB3Q04118 309 aaPredicted RBP10.98□□□□□ -0.65
RABGGTA-220ENST00000560998 LOXL1Q08397 574 aaPredicted RBP10.98□□□□□ -0.65
RABGGTA-220ENST00000560998 TM4SF20Q53R12 229 aa10.98□□□□□ -0.65
RABGGTA-220ENST00000560998 CIARTQ8N365 385 aaPredicted RBP10.98□□□□□ -0.65
RABGGTA-220ENST00000560998 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms