RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 U3KQ87 197 aa1.79□□□□□ -2.12
LRRC28-218ENST00000560236 IGHV1OR15-1A0A075B7D0 117 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 TRAV26-1A0A087WT03 109 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 TRAV1-2A0A0B4J238 106 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 A0A0D9SG52 128 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 LOC100131303A0A0U1RQF7 123 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 LOC107986453A0A1B0GWG9 222 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 KNCNA6PVL3 124 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 C9JCJ5 164 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 MFNGO00587 321 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 GABRPO00591 440 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 NUPL2O15504 423 aaKnown RBP1.78□□□□□ -2.12
LRRC28-218ENST00000560236 FABP7O15540 132 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 HPGDSO60760 199 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 B3GALNT1O75752 331 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 SNAPC5O75971 98 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 MPC2O95563 127 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 HSMCR30P0CW71 290 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 DEFB130BP0DP73 79 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 DEFB130AP0DP74 79 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 CD37P11049 281 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 GTF2F2P13984 249 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 CEACAM6P40199 344 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 CTRLP40313 264 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 RPL27AP46776 148 aaKnown RBP1.78□□□□□ -2.12
LRRC28-218ENST00000560236 GBX2P52951 348 aaPredicted RBP1.78□□□□□ -2.12
LRRC28-218ENST00000560236 RPS11P62280 158 aaKnown RBP eCLIP1.78□□□□□ -2.12
LRRC28-218ENST00000560236 SNRPD3P62318 126 aaKnown RBP1.78□□□□□ -2.12
LRRC28-218ENST00000560236 MRPS15P82914 257 aaKnown RBP1.78□□□□□ -2.12
LRRC28-218ENST00000560236 UNC119Q13432 240 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 OR5I1Q13606 314 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 ARFRP1Q13795 201 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 GINS1Q14691 196 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 TRAM1Q15629 374 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 HMGN3Q15651 99 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 LGALSLQ3ZCW2 172 aaPredicted RBP1.78□□□□□ -2.12
LRRC28-218ENST00000560236 OR2G6Q5TZ20 316 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 SPATA31B1PQ5VZV4 182 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 C22orf42Q6IC83 251 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 ETFRF1Q6IPR1 90 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 RAB12Q6IQ22 244 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 IQCF2Q8IXL9 164 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 FAM24BQ8N5W8 94 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 OR13C9Q8NGT0 318 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 ENKURQ8TC29 256 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 DCANP1Q8TF63 244 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 TNFAIP8L1Q8WVP5 186 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 UFD1Q92890 307 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 DIRAS2Q96HU8 199 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 ADTRPQ96IZ2 230 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 PGLYRP3Q96LB9 341 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 TXN2Q99757 166 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 HINT2Q9BX68 163 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 COPZ2Q9P299 210 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 HSPB11Q9Y547 144 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 S4R3C0 116 aa1.78□□□□□ -2.12
LRRC28-218ENST00000560236 FAM240BA0A1B0GVZ2 78 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 ANKRD20A5PA0PJZ0 165 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 HELTA6NFD8 242 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 SNTNA6NMZ2 147 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 HMSDA8MTL9 139 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 SNRPGP15A8MWD9 76 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 H3BMM0 161 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 H3BN98 237 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 M0R1X1 148 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 ZNF207O43670 478 aaKnown RBP1.77□□□□□ -2.13
LRRC28-218ENST00000560236 ZNF324O75467 553 aaPredicted RBP1.77□□□□□ -2.13
LRRC28-218ENST00000560236 RPP14O95059 124 aaKnown RBP1.77□□□□□ -2.13
LRRC28-218ENST00000560236 YIF1AO95070 293 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 CFDP00746 253 aaPredicted RBP1.77□□□□□ -2.13
LRRC28-218ENST00000560236 TCRBP04435 133 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 IL5P05113 134 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 CTSGP08311 255 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 NMBP08949 121 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 GIPP09681 153 aaPredicted RBP1.77□□□□□ -2.13
LRRC28-218ENST00000560236 UCHL1P09936 223 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 ZNF688P0C7X2 276 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 ANXA3P12429 323 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 HLA-DRB4P13762 266 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 SRMP19623 302 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 CXCL3P19876 107 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 RAB3AP20336 220 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 MAPK3P27361 379 aaPredicted RBP1.77□□□□□ -2.13
LRRC28-218ENST00000560236 MXD1Q05195 221 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 TIGITQ495A1 244 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 PYDC2Q56P42 97 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 TRIQKQ629K1 86 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 SFXN4Q6P4A7 337 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 FAM220AQ7Z4H9 259 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 GID4Q8IVV7 300 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 SLC35F2Q8IXU6 374 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 C1orf158Q8N1D5 194 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 LINC01561Q8N1V8 128 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 SYS1Q8N2H4 156 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 ACBD7Q8N6N7 88 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 STXBP6Q8NFX7 210 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 TMEM167AQ8TBQ9 72 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 MRPL30Q8TCC3 161 aaKnown RBP1.77□□□□□ -2.13
LRRC28-218ENST00000560236 SMIM4Q8WVI0 70 aa1.77□□□□□ -2.13
LRRC28-218ENST00000560236 IL1F10Q8WWZ1 152 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms