RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 CLPSL1A2RUU4 121 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 PRAC2D3DTV9 90 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 SCGB2A1O75556 95 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 TRGV3P03979 118 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 CSN1S1P47710 185 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 SRSF1Q07955 248 aaKnown RBP eCLIP8.16□□□□□ -1.1
TPM1-210ENST00000558264 ERCC8Q13216 396 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 FAM209BQ5JX69 171 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 LYPD1Q8N2G4 141 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 EEF1AKMT3Q96AZ1 226 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 NAGKQ9UJ70 344 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 TSTD3H0UI37 97 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 NDUFS8O00217 210 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 IGHG4P01861 327 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 PKIAP61925 76 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 ATP5G2Q06055 141 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 RBPMS2Q6ZRY4 209 aaKnown RBP8.16□□□□□ -1.1
TPM1-210ENST00000558264 SIGLECL1Q8N7X8 197 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 WIPF2Q8TF74 440 aaPredicted RBP8.16□□□□□ -1.1
TPM1-210ENST00000558264 TXN2Q99757 166 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 NPIPB6E9PJ23 425 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 GOSR1O95249 250 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 ARMS2P0C7Q2 107 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 RELQ04864 619 aaPredicted RBP8.16□□□□□ -1.1
TPM1-210ENST00000558264 PDE6HQ13956 83 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 PMCHL1Q16048 86 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 TMEM95Q3KNT9 176 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 COX19Q49B96 90 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 S100A7AQ86SG5 101 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 KCNS1Q96KK3 526 aa8.16□□□□□ -1.1
TPM1-210ENST00000558264 BUB3O43684 328 aa8.15□□□□□ -1.1
TPM1-210ENST00000558264 GPX1P07203 203 aa8.15□□□□□ -1.1
TPM1-210ENST00000558264 DDTP30046 118 aa8.15□□□□□ -1.1
TPM1-210ENST00000558264 KRTAP10-9P60411 292 aa8.15□□□□□ -1.1
TPM1-210ENST00000558264 OR10J3Q5JRS4 329 aa8.15□□□□□ -1.1
TPM1-210ENST00000558264 RNASEKQ6P5S7 137 aaKnown RBP8.15□□□□□ -1.1
TPM1-210ENST00000558264 ZNF843Q8N446 348 aa8.15□□□□□ -1.1
TPM1-210ENST00000558264 ALKBH7Q9BT30 221 aaPredicted RBP8.15□□□□□ -1.1
TPM1-210ENST00000558264 KLK15Q9H2R5 256 aa8.15□□□□□ -1.1
TPM1-210ENST00000558264 ZFP30Q9Y2G7 519 aa8.15□□□□□ -1.1
TPM1-210ENST00000558264 CT45A10P0DMU9 189 aa8.15□□□□□ -1.11
TPM1-210ENST00000558264 PSG9Q00887 426 aa8.15□□□□□ -1.11
TPM1-210ENST00000558264 DEFA6Q01524 100 aa8.15□□□□□ -1.11
TPM1-210ENST00000558264 NRN1Q9NPD7 142 aa8.15□□□□□ -1.11
TPM1-210ENST00000558264 ESDP10768 282 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 ZNF80P51504 273 aaPredicted RBP8.14□□□□□ -1.11
TPM1-210ENST00000558264 PAFAH1B2P68402 229 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 CT83Q5H943 113 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 LCN12Q6JVE5 192 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 UNQ9165/PRO28630Q6UXU0 137 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 SPOCK3Q9BQ16 436 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 MEGF9Q9H1U4 602 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 SH2D1AO60880 128 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 ZNF324O75467 553 aaPredicted RBP8.14□□□□□ -1.11
TPM1-210ENST00000558264 PF4V1P10720 104 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 COX6B1P14854 86 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 ZNF138P52744 262 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 RASL11AQ6T310 242 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 ATP5L2Q7Z4Y8 100 aa8.14□□□□□ -1.11
TPM1-210ENST00000558264 IGKV3-7A0A075B6H7 116 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 B4DSR2 109 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 C14orf144Q96I85 54 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 UBR5O95071 2799 aaPredicted RBP8.13□□□□□ -1.11
TPM1-210ENST00000558264 TRBV7-1A0A0A6YYK4 115 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 A8MWP6 167 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 ARL3P36405 182 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 C19orf54Q5BKX5 351 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 DNLZQ5SXM8 178 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 PRR25Q96S07 402 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 METTL26Q96S19 204 aa8.13□□□□□ -1.11
TPM1-210ENST00000558264 A6NDX4 124 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 HSBP1O75506 76 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 TGFAP01135 160 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 IGHV4-59P01825 116 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 CSN3P07498 182 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 C16orf54Q6UWD8 224 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 NIT1Q86X76 327 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 OR4B1Q8NGF8 309 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 GFRA4Q9GZZ7 299 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 PAM16Q9Y3D7 125 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 TIMM8BQ9Y5J9 83 aaPredicted RBP8.12□□□□□ -1.11
TPM1-210ENST00000558264 DOPEY2Q9Y3R5 2298 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 NAV2Q8IVL1 2488 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 TRBV6-1A0A0K0K1D8 114 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 TMEM213A2RRL7 107 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 DEFB1P60022 68 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 C10orf99Q6UWK7 81 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 ATOH7Q8N100 152 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 URB1-AS1Q96HZ7 61 aa8.12□□□□□ -1.11
TPM1-210ENST00000558264 A0A1B0GUT8 65 aa8.11□□□□□ -1.11
TPM1-210ENST00000558264 TMEM189A5PLL7 270 aa8.11□□□□□ -1.11
TPM1-210ENST00000558264 DEFB112Q30KQ8 113 aa8.11□□□□□ -1.11
TPM1-210ENST00000558264 LYZL1Q6UWQ5 148 aa8.11□□□□□ -1.11
TPM1-210ENST00000558264 IL17RELQ6ZVW7 336 aa8.11□□□□□ -1.11
TPM1-210ENST00000558264 CLEC5AQ9NY25 188 aa8.11□□□□□ -1.11
TPM1-210ENST00000558264 M0R2Z0 102 aa8.11□□□□□ -1.11
TPM1-210ENST00000558264 SMAD7O15105 426 aaKnown RBP8.11□□□□□ -1.11
TPM1-210ENST00000558264 FAM162BQ5T6X4 162 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms