RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 C20orf144Q9BQM9 153 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 KRTAP4-9Q9BYQ8 210 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 PPP1R14DQ9NXH3 145 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 PTTG2Q9NZH5 202 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 PXMP4Q9Y6I8 212 aa7.22□□□□□ -1.25
USP3-207ENST00000558218 BOLA2-SMG1P6H3BVE0 249 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 ZNF253O75346 499 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 IGLC2P0DOY2 106 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 EMP1P54849 157 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 RAB32Q13637 225 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 FAM222AQ5U5X8 452 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 IGFL4Q6B9Z1 124 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 RNF182Q8N6D2 247 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 RPUSD4Q96CM3 377 aaKnown RBP7.21□□□□□ -1.26
USP3-207ENST00000558218 NMES1Q9C002 83 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 SLC25A31Q9H0C2 315 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 SLC39A9Q9NUM3 307 aa7.21□□□□□ -1.26
USP3-207ENST00000558218 YTHDF2Q9Y5A9 579 aaKnown RBP7.21□□□□□ -1.26
USP3-207ENST00000558218 ALMS1Q8TCU4 4167 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 LYRM9A8MSI8 78 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 E5RGE8 158 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 MED14OSP0DP75 135 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 CDKN1BP46527 198 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 TAS2R60P59551 318 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 S100A10P60903 97 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 RHOBP62745 196 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 HIST1H1AQ02539 215 aaPredicted RBP7.2□□□□□ -1.26
USP3-207ENST00000558218 OPCMLQ14982 345 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 SPINK13Q1W4C9 94 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 ZNF493Q6ZR52 646 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 POM121L12Q8N7R1 296 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 SAT2Q96F10 170 aaPredicted RBP7.2□□□□□ -1.26
USP3-207ENST00000558218 MARVELD1Q9BSK0 173 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 TMEM14CQ9P0S9 112 aa7.2□□□□□ -1.26
USP3-207ENST00000558218 PLECQ15149 4684 aaKnown RBP7.19□□□□□ -1.26
USP3-207ENST00000558218 IGSF23A1L1A6 192 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 INMT-MINDY4F8WBC2 141 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 M0R2Z0 102 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 DEFA1P59665 94 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 DEFA3P59666 94 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 BAXQ07812 192 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 ANKRD39Q53RE8 183 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 MIC13Q5XKP0 118 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 ZNF767PQ75MW2 155 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 OR10J6PQ8NGY7 276 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 ODF3Q96PU9 254 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 LINC01587Q99440 93 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 BATF3Q9NR55 127 aa7.19□□□□□ -1.26
USP3-207ENST00000558218 H3BQ15 152 aa7.18□□□□□ -1.26
USP3-207ENST00000558218 HIST1H1EP10412 219 aaKnown RBP7.18□□□□□ -1.26
USP3-207ENST00000558218 DAD1P61803 113 aa7.18□□□□□ -1.26
USP3-207ENST00000558218 IFITM3Q01628 133 aa7.18□□□□□ -1.26
USP3-207ENST00000558218 PDE6HQ13956 83 aa7.18□□□□□ -1.26
USP3-207ENST00000558218 RNF212Q495C1 297 aa7.18□□□□□ -1.26
USP3-207ENST00000558218 LCE4AQ5TA78 99 aa7.18□□□□□ -1.26
USP3-207ENST00000558218 MRPL53Q96EL3 112 aaKnown RBP7.18□□□□□ -1.26
USP3-207ENST00000558218 KCNIP2Q9NS61 270 aa7.18□□□□□ -1.26
USP3-207ENST00000558218 PRELID1Q9Y255 219 aa7.18□□□□□ -1.26
USP3-207ENST00000558218 HYDINQ4G0P3 5121 aa7.18□□□□□ -1.26
USP3-207ENST00000558218 UBE2L5PA0A1B0GUS4 154 aa7.17□□□□□ -1.26
USP3-207ENST00000558218 ZNF705GA8MUZ8 300 aaPredicted RBP7.17□□□□□ -1.26
USP3-207ENST00000558218 H7BYZ3 331 aa7.17□□□□□ -1.26
USP3-207ENST00000558218 FGF7P21781 194 aa7.17□□□□□ -1.26
USP3-207ENST00000558218 NHLH2Q02577 135 aa7.17□□□□□ -1.26
USP3-207ENST00000558218 MORN5Q5VZ52 161 aa7.17□□□□□ -1.26
USP3-207ENST00000558218 BAP18Q8IXM2 172 aa7.17□□□□□ -1.26
USP3-207ENST00000558218 OR5C1Q8NGR4 320 aa7.17□□□□□ -1.26
USP3-207ENST00000558218 C16orf74Q96GX8 76 aa7.17□□□□□ -1.26
USP3-207ENST00000558218 NPCDR1Q9BY65 106 aa7.17□□□□□ -1.26
USP3-207ENST00000558218 PLA2G2DQ9UNK4 145 aa7.17□□□□□ -1.26
USP3-207ENST00000558218 EPPK1P58107 5090 aaKnown RBP7.17□□□□□ -1.26
USP3-207ENST00000558218 TRBV19A0A075B6N1 114 aa7.16□□□□□ -1.26
USP3-207ENST00000558218 TRAV12-2A0A075B6T6 113 aa7.16□□□□□ -1.26
USP3-207ENST00000558218 TRAV5A0A0B4J249 113 aa7.16□□□□□ -1.26
USP3-207ENST00000558218 CBY3A6NI87 242 aa7.16□□□□□ -1.26
USP3-207ENST00000558218 PET100P0DJ07 73 aa7.16□□□□□ -1.26
USP3-207ENST00000558218 FAM3BP58499 235 aaPredicted RBP7.16□□□□□ -1.26
USP3-207ENST00000558218 LINC00336Q6ZUF6 198 aa7.16□□□□□ -1.26
USP3-207ENST00000558218 CCDC28AQ8IWP9 274 aa7.16□□□□□ -1.26
USP3-207ENST00000558218 C15orf53Q8NAA6 179 aa7.16□□□□□ -1.26
USP3-207ENST00000558218 LINC00477Q96M19 166 aa7.16□□□□□ -1.26
USP3-207ENST00000558218 ZNF586Q9NXT0 402 aa7.16□□□□□ -1.26
USP3-207ENST00000558218 TIMM8BQ9Y5J9 83 aaPredicted RBP7.16□□□□□ -1.26
USP3-207ENST00000558218 PLAC8L1A1L4L8 177 aa7.15□□□□□ -1.26
USP3-207ENST00000558218 C17orf112F2Z3M2 114 aa7.15□□□□□ -1.26
USP3-207ENST00000558218 SLC17A3O00476 420 aa7.15□□□□□ -1.26
USP3-207ENST00000558218 NMBP08949 121 aa7.15□□□□□ -1.26
USP3-207ENST00000558218 AZU1P20160 251 aa7.15□□□□□ -1.26
USP3-207ENST00000558218 LEPP41159 167 aa7.15□□□□□ -1.26
USP3-207ENST00000558218 LGALS9BQ3B8N2 356 aa7.15□□□□□ -1.26
USP3-207ENST00000558218 TMEM263Q8WUH6 116 aaKnown RBP7.15□□□□□ -1.26
USP3-207ENST00000558218 PPP1R1CQ8WVI7 109 aa7.15□□□□□ -1.26
USP3-207ENST00000558218 MRPL32Q9BYC8 188 aaKnown RBP7.15□□□□□ -1.26
USP3-207ENST00000558218 WDR61Q9GZS3 305 aaKnown RBP7.15□□□□□ -1.26
USP3-207ENST00000558218 AAMDCQ9H7C9 122 aa7.15□□□□□ -1.26
USP3-207ENST00000558218 TIMM9Q9Y5J7 89 aa7.15□□□□□ -1.26
USP3-207ENST00000558218 H0YIZ8 118 aa7.14□□□□□ -1.27
USP3-207ENST00000558218 SIX6O95475 246 aa7.14□□□□□ -1.27
USP3-207ENST00000558218 SLC25A5P05141 298 aaKnown RBP7.14□□□□□ -1.27
USP3-207ENST00000558218 ATP5G1P05496 136 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms